Gene Dmel\CG44008

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General Information

Symbol

Dmel\CG44008

Species

D. melanogaster

Name

Annotation symbol

CG44008

Feature type

protein_coding_gene

FlyBase ID

FBgn0264750

Gene Model Status

Current

Stock availability

2 publicly available

Also Known As

CG31758

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

33A3-33A3

Sequence location

2L:11,841,502..11,842,226 [-]

Genomic Maps

Select View:

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol Dmel\CG44008 (FBgn0264750). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: serine-type endopeptidase inhibitor activity. There is experimental evidence that it is involved in the biological process: multicellular organism reproduction. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Gene sequence location is 2L:11841502..11842226.

User Contributed Data

Beta version, feedback welcome

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

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FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

33A3-33A3

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\CG44008 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Gene model reviewed during 5.47

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

CG44008-RA

FBtr0334143

NM_001273469

725

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

CG44008-PA

FBpp0306260

8.9

7.96

NP_001260398

AGB92933

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

extracellular space

inferred from direct assay

(Findlay et al., 2008)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		42
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		34
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		49
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		714
digestive system, 1-day adult		526
digestive system, 4-day adult		456
digestive system, 20-day adult		363
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		41
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		56
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		(42)
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		(34)
head, mated 1-day female		8
head, mated 4-day female		(27)
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		(27)
head, mated 20-day male		(49)
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		(714)
digestive system, 1-day adult		(526)
digestive system, 4-day adult		(456)
digestive system, 20-day adult		(363)
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		(41)
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		(56)
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		42
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		34
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		49
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		(714)
digestive system, 1-day adult		(526)
digestive system, 4-day adult		(456)
digestive system, 20-day adult		(363)
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		41
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		56
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		42
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		34
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		49
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		714
digestive system, 1-day adult		526
digestive system, 4-day adult		456
digestive system, 20-day adult		363
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		41
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		56
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		42
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		34
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		49
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		714
digestive system, 1-day adult		526
digestive system, 4-day adult		456
digestive system, 20-day adult		363
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		41
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		56
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

log, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		(42)
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		(34)
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		(49)
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		(714)
digestive system, 1-day adult		(526)
digestive system, 4-day adult		(456)
digestive system, 20-day adult		(363)
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		(41)
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		(56)
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		42
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		34
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		49
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		(714)
digestive system, 1-day adult		(526)
digestive system, 4-day adult		(456)
digestive system, 20-day adult		(363)
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		41
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		56
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		42
central nervous system, larvae L3		1
central nervous system, pupae P8		1
head, virgin 1-day female		14
head, virgin 4-day female		16
head, virgin 20-day female		34
head, mated 1-day female		8
head, mated 4-day female		27
head, mated 20-day female		25
head, mated 1-day male		8
head, mated 4-day male		27
head, mated 20-day male		49
salivary gland, larvae L3 wandering		18
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		714
digestive system, 1-day adult		526
digestive system, 4-day adult		456
digestive system, 20-day adult		363
fat body, larvae L3 wandering		6
fat body, white prepupae		6
fat body, pupae P8		11
carcass, larvae L3 wandering		2
carcass, 1-day adult		23
carcass, 4-day adult		26
carcass, 20-day adult		41
ovary, virgin 4-day female		1
ovary, mated 4-day female		0
testis, mated 4-day male		16
accessory gland, mated 4-day male		56
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Tissue		Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male

modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		48
embryo 18-20hr		74
embryo 20-22hr		125
embryo 22-24hr		163
larva L1		93
larva L2		130
larva L3 12hr old		96
larva L3 puffstage 1-2		280
larva L3 puffstage 3-6		168
larva L3 puffstage 7-9		164
white prepupae new		95
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		50
adult male 01day		93
adult male 05day		112
adult male 30day		94
adult female 01day		78
adult female 05day		68
adult female 30day		79
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		(48)
embryo 18-20hr		(74)
embryo 20-22hr		(125)
embryo 22-24hr		(163)
larva L1		(93)
larva L2		(130)
larva L3 12hr old		(96)
larva L3 puffstage 1-2		(280)
larva L3 puffstage 3-6		(168)
larva L3 puffstage 7-9		(164)
white prepupae new		(95)
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		(50)
adult male 01day		(93)
adult male 05day		(112)
adult male 30day		(94)
adult female 01day		(78)
adult female 05day		(68)
adult female 30day		(79)
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		48
embryo 18-20hr		74
embryo 20-22hr		(125)
embryo 22-24hr		(163)
larva L1		93
larva L2		(130)
larva L3 12hr old		96
larva L3 puffstage 1-2		(280)
larva L3 puffstage 3-6		(168)
larva L3 puffstage 7-9		(164)
white prepupae new		95
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		50
adult male 01day		93
adult male 05day		(112)
adult male 30day		94
adult female 01day		78
adult female 05day		68
adult female 30day		79
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		48
embryo 18-20hr		74
embryo 20-22hr		125
embryo 22-24hr		163
larva L1		93
larva L2		130
larva L3 12hr old		96
larva L3 puffstage 1-2		280
larva L3 puffstage 3-6		168
larva L3 puffstage 7-9		164
white prepupae new		95
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		50
adult male 01day		93
adult male 05day		112
adult male 30day		94
adult female 01day		78
adult female 05day		68
adult female 30day		79
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		48
embryo 18-20hr		74
embryo 20-22hr		125
embryo 22-24hr		163
larva L1		93
larva L2		130
larva L3 12hr old		96
larva L3 puffstage 1-2		280
larva L3 puffstage 3-6		168
larva L3 puffstage 7-9		164
white prepupae new		95
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		50
adult male 01day		93
adult male 05day		112
adult male 30day		94
adult female 01day		78
adult female 05day		68
adult female 30day		79
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		(48)
embryo 18-20hr		(74)
embryo 20-22hr		(125)
embryo 22-24hr		(163)
larva L1		(93)
larva L2		(130)
larva L3 12hr old		(96)
larva L3 puffstage 1-2		(280)
larva L3 puffstage 3-6		(168)
larva L3 puffstage 7-9		(164)
white prepupae new		(95)
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		(50)
adult male 01day		(93)
adult male 05day		(112)
adult male 30day		(94)
adult female 01day		(78)
adult female 05day		(68)
adult female 30day		(79)
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		48
embryo 18-20hr		74
embryo 20-22hr		125
embryo 22-24hr		(163)
larva L1		93
larva L2		130
larva L3 12hr old		96
larva L3 puffstage 1-2		(280)
larva L3 puffstage 3-6		(168)
larva L3 puffstage 7-9		(164)
white prepupae new		95
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		50
adult male 01day		93
adult male 05day		112
adult male 30day		94
adult female 01day		78
adult female 05day		68
adult female 30day		79
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		1
embryo 10-12hr		3
embryo 12-14hr		7
embryo 14-16hr		20
embryo 16-18hr		48
embryo 18-20hr		74
embryo 20-22hr		125
embryo 22-24hr		163
larva L1		93
larva L2		130
larva L3 12hr old		96
larva L3 puffstage 1-2		280
larva L3 puffstage 3-6		168
larva L3 puffstage 7-9		164
white prepupae new		95
white prepupae 12hr		18
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		10
pupae 4d postWPP		50
adult male 01day		93
adult male 05day		112
adult male 30day		94
adult female 01day		78
adult female 05day		68
adult female 30day		79
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

modENCODE Temporal Expression Data (Graveley et al., 2011)

modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		1
embryonic Kc167		4
embryonic S1		0
embryonic S3		6
leg disc CME L1		0
wing disc CME-W2		0
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		2
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		1
tumorous blood cells mbn2		1
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Cell Line		Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS

modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		37
cold shock, 4-day adult		43
heat shock, 4-day adult		110
Cadmium 50 mM 6 hrs, larvae L3		146
Cadmium 50 mM 12 hrs, larvae L3		174
Cadmium 50 mM 48 hrs, 4-day adult		116
Cadmium 100 mM 48 hrs, 4-day adult		34
Copper 0.5 mM 12 hrs, larvae L3		100
Copper 15 mM 48 hrs, 4-day adult		33
Zinc 5 mM 12 hrs, larvae L3		67
Zinc 4.5 mM 48 hrs, 4-day adult		77
Ethanol 2.5% 3 hrs, larvae L3		36
Ethanol 5% 3 hrs, larvae L3		202
Ethanol 10% 3 hrs, larvae L3		131
Caffeine 1.5 mg/ml 4 hrs, larvae L3		177
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		44
Caffeine 25 mg/ml 48 hrs, 4-day adult		36
Paraquat 5 mM 48 hrs, 4-day adult		54
Paraquat 10 mM 48 hrs, 4-day adult		77
Rotenone 2 μg 12 hrs, larvae L3		199
Rotenone 8 μg 12 hrs, larvae L3		173
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		(37)
cold shock, 4-day adult		(43)
heat shock, 4-day adult		(110)
Cadmium 50 mM 6 hrs, larvae L3		(146)
Cadmium 50 mM 12 hrs, larvae L3		(174)
Cadmium 50 mM 48 hrs, 4-day adult		(116)
Cadmium 100 mM 48 hrs, 4-day adult		(34)
Copper 0.5 mM 12 hrs, larvae L3		(100)
Copper 15 mM 48 hrs, 4-day adult		(33)
Zinc 5 mM 12 hrs, larvae L3		(67)
Zinc 4.5 mM 48 hrs, 4-day adult		(77)
Ethanol 2.5% 3 hrs, larvae L3		(36)
Ethanol 5% 3 hrs, larvae L3		(202)
Ethanol 10% 3 hrs, larvae L3		(131)
Caffeine 1.5 mg/ml 4 hrs, larvae L3		(177)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		(44)
Caffeine 25 mg/ml 48 hrs, 4-day adult		(36)
Paraquat 5 mM 48 hrs, 4-day adult		(54)
Paraquat 10 mM 48 hrs, 4-day adult		(77)
Rotenone 2 μg 12 hrs, larvae L3		(199)
Rotenone 8 μg 12 hrs, larvae L3		(173)
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		37
cold shock, 4-day adult		43
heat shock, 4-day adult		(110)
Cadmium 50 mM 6 hrs, larvae L3		(146)
Cadmium 50 mM 12 hrs, larvae L3		(174)
Cadmium 50 mM 48 hrs, 4-day adult		(116)
Cadmium 100 mM 48 hrs, 4-day adult		34
Copper 0.5 mM 12 hrs, larvae L3		100
Copper 15 mM 48 hrs, 4-day adult		33
Zinc 5 mM 12 hrs, larvae L3		67
Zinc 4.5 mM 48 hrs, 4-day adult		77
Ethanol 2.5% 3 hrs, larvae L3		36
Ethanol 5% 3 hrs, larvae L3		(202)
Ethanol 10% 3 hrs, larvae L3		(131)
Caffeine 1.5 mg/ml 4 hrs, larvae L3		(177)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		44
Caffeine 25 mg/ml 48 hrs, 4-day adult		36
Paraquat 5 mM 48 hrs, 4-day adult		54
Paraquat 10 mM 48 hrs, 4-day adult		77
Rotenone 2 μg 12 hrs, larvae L3		(199)
Rotenone 8 μg 12 hrs, larvae L3		(173)
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		37
cold shock, 4-day adult		43
heat shock, 4-day adult		110
Cadmium 50 mM 6 hrs, larvae L3		146
Cadmium 50 mM 12 hrs, larvae L3		174
Cadmium 50 mM 48 hrs, 4-day adult		116
Cadmium 100 mM 48 hrs, 4-day adult		34
Copper 0.5 mM 12 hrs, larvae L3		100
Copper 15 mM 48 hrs, 4-day adult		33
Zinc 5 mM 12 hrs, larvae L3		67
Zinc 4.5 mM 48 hrs, 4-day adult		77
Ethanol 2.5% 3 hrs, larvae L3		36
Ethanol 5% 3 hrs, larvae L3		202
Ethanol 10% 3 hrs, larvae L3		131
Caffeine 1.5 mg/ml 4 hrs, larvae L3		177
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		44
Caffeine 25 mg/ml 48 hrs, 4-day adult		36
Paraquat 5 mM 48 hrs, 4-day adult		54
Paraquat 10 mM 48 hrs, 4-day adult		77
Rotenone 2 μg 12 hrs, larvae L3		199
Rotenone 8 μg 12 hrs, larvae L3		173
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		37
cold shock, 4-day adult		43
heat shock, 4-day adult		110
Cadmium 50 mM 6 hrs, larvae L3		146
Cadmium 50 mM 12 hrs, larvae L3		174
Cadmium 50 mM 48 hrs, 4-day adult		116
Cadmium 100 mM 48 hrs, 4-day adult		34
Copper 0.5 mM 12 hrs, larvae L3		100
Copper 15 mM 48 hrs, 4-day adult		33
Zinc 5 mM 12 hrs, larvae L3		67
Zinc 4.5 mM 48 hrs, 4-day adult		77
Ethanol 2.5% 3 hrs, larvae L3		36
Ethanol 5% 3 hrs, larvae L3		202
Ethanol 10% 3 hrs, larvae L3		131
Caffeine 1.5 mg/ml 4 hrs, larvae L3		177
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		44
Caffeine 25 mg/ml 48 hrs, 4-day adult		36
Paraquat 5 mM 48 hrs, 4-day adult		54
Paraquat 10 mM 48 hrs, 4-day adult		77
Rotenone 2 μg 12 hrs, larvae L3		199
Rotenone 8 μg 12 hrs, larvae L3		173
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		(37)
cold shock, 4-day adult		(43)
heat shock, 4-day adult		(110)
Cadmium 50 mM 6 hrs, larvae L3		(146)
Cadmium 50 mM 12 hrs, larvae L3		(174)
Cadmium 50 mM 48 hrs, 4-day adult		(116)
Cadmium 100 mM 48 hrs, 4-day adult		(34)
Copper 0.5 mM 12 hrs, larvae L3		(100)
Copper 15 mM 48 hrs, 4-day adult		(33)
Zinc 5 mM 12 hrs, larvae L3		(67)
Zinc 4.5 mM 48 hrs, 4-day adult		(77)
Ethanol 2.5% 3 hrs, larvae L3		(36)
Ethanol 5% 3 hrs, larvae L3		(202)
Ethanol 10% 3 hrs, larvae L3		(131)
Caffeine 1.5 mg/ml 4 hrs, larvae L3		(177)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		(44)
Caffeine 25 mg/ml 48 hrs, 4-day adult		(36)
Paraquat 5 mM 48 hrs, 4-day adult		(54)
Paraquat 10 mM 48 hrs, 4-day adult		(77)
Rotenone 2 μg 12 hrs, larvae L3		(199)
Rotenone 8 μg 12 hrs, larvae L3		(173)
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		37
cold shock, 4-day adult		43
heat shock, 4-day adult		110
Cadmium 50 mM 6 hrs, larvae L3		(146)
Cadmium 50 mM 12 hrs, larvae L3		(174)
Cadmium 50 mM 48 hrs, 4-day adult		116
Cadmium 100 mM 48 hrs, 4-day adult		34
Copper 0.5 mM 12 hrs, larvae L3		100
Copper 15 mM 48 hrs, 4-day adult		33
Zinc 5 mM 12 hrs, larvae L3		67
Zinc 4.5 mM 48 hrs, 4-day adult		77
Ethanol 2.5% 3 hrs, larvae L3		36
Ethanol 5% 3 hrs, larvae L3		(202)
Ethanol 10% 3 hrs, larvae L3		131
Caffeine 1.5 mg/ml 4 hrs, larvae L3		(177)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		44
Caffeine 25 mg/ml 48 hrs, 4-day adult		36
Paraquat 5 mM 48 hrs, 4-day adult		54
Paraquat 10 mM 48 hrs, 4-day adult		77
Rotenone 2 μg 12 hrs, larvae L3		(199)
Rotenone 8 μg 12 hrs, larvae L3		(173)
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		37
cold shock, 4-day adult		43
heat shock, 4-day adult		110
Cadmium 50 mM 6 hrs, larvae L3		146
Cadmium 50 mM 12 hrs, larvae L3		174
Cadmium 50 mM 48 hrs, 4-day adult		116
Cadmium 100 mM 48 hrs, 4-day adult		34
Copper 0.5 mM 12 hrs, larvae L3		100
Copper 15 mM 48 hrs, 4-day adult		33
Zinc 5 mM 12 hrs, larvae L3		67
Zinc 4.5 mM 48 hrs, 4-day adult		77
Ethanol 2.5% 3 hrs, larvae L3		36
Ethanol 5% 3 hrs, larvae L3		202
Ethanol 10% 3 hrs, larvae L3		131
Caffeine 1.5 mg/ml 4 hrs, larvae L3		177
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		44
Caffeine 25 mg/ml 48 hrs, 4-day adult		36
Paraquat 5 mM 48 hrs, 4-day adult		54
Paraquat 10 mM 48 hrs, 4-day adult		77
Rotenone 2 μg 12 hrs, larvae L3		199
Rotenone 8 μg 12 hrs, larvae L3		173
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Treatment		Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3

Expression Clusters

External Data & Images

Linkouts

Alleles & Phenotypes

Summary of Allele Phenotypes

Phenotype manifest in

Allele

Classical Alleles ( 1 )

For All Classical Alleles Show

Allele of CG44008	Class	Mutagen	Stocks	Known lesion
CG44008^MI02181			1	--

Alleles Carried on Transgenic Constructs ( 1 )

For All Alleles Carried on Transgenic Constructs Show

Allele of CG44008	Class	Mutagen	Stocks	Known lesion
CG44008^KK112421		in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes

Aneuploid Aberrations

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

Insertions

Type of insertions

Name

Expression data

miscellaneous insertions

Mi{MIC}CG44008^MI02181

Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )

Terms Based on Experimental Evidence ( 2 terms )

Molecular Function ( 0 terms)

Biological Process

CV term

Evidence

References

multicellular organism reproduction

inferred from expression pattern

(Findlay et al., 2008)

Cellular Component

CV term

Evidence

References

extracellular space

inferred from direct assay

(Findlay et al., 2008)

Terms Based on Predictions or Assertions ( 2 terms )

Molecular Function

CV term

Evidence

References

serine-type endopeptidase inhibitor activity

inferred from sequence model with SMART:SM00280

(Curators, 2008--)

Biological Process

CV term

Evidence

References

negative regulation of peptidase activity

inferred from sequence model with SMART:SM00280

(Curators, 2008--)

Cellular Component ( 0 terms)

Sequence Ontology: Class of Gene

protein_coding_gene

(FlyBase Genome Annotators, 2012)

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

CG44008 allele

Gene

References

External Data

Linkouts

Orthologs

OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

No orthologs identified

Dipteran inclusive ortholog search

No orthologs identified

Insect inclusive ortholog search

No orthologs identified

Arthropod inclusive ortholog search

No orthologs identified

Metazoa inclusive ortholog search

No orthologs identified

Orthologs in Drosophila Species (None identified)

No orthologies identified

Orthologs in non-Drosophila Dipterans (None identified)

No non-Drosophilid orthologies identified

Orthologs in non-Dipteran Insects (None identified)

No non-Dipteran orthologies identified

Orthologs in non-Insect Arthropods (None identified)

No non-Insect Arthropod orthologies identified

Orthologs in non-Arthropod Metazoa (None identified)

No non-Arthropod Metazoa orthologies identified

Human Orthologs (0)

Gene

OMIM

HGNC

AAA Orthologs (0) based on analysis using Dmel annotation version 4.3

No orthologs identified

Stocks & Reagents

Stocks Listed in FlyBase ( 2 )

Bloomington

38551

y¹ w^*; Mi{MIC}CG44008^MI02181

VDRC

v102779

P{KK112421}VIE-260B

Genomic Clones ( 1 )

BACR05B13

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 12 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones

Other clones

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi & Array Information

Linkouts

Antibody Information

Other Information

Discoverer

Etymology

Identification

Relationship to Other Genes

Source for database identity of

Source for database merge of

Source for merge of: Pde1c CG14943 CG14944 CG31757 CG31758

(FlyBase Genome Annotators, 2008)

Additional comments

Annotation CG42325 split in release 5.47 of the genome annotation; split supported by EST and RNASeq coverage data. An exon of CG42325 has been made into a distinct annotation, CG44008; CG44008 is a reinstatement of CG31758 from release 5.2. The remainder of CG42325 forms the CG44007 annotation, and retains the function and name (Pde1c) of CG42325.

(FlyBase Genome Annotators, 2012)

Annotations CG14940, CG14943, CG14944, CG31757 and CG31758 merged as CG42325 in release 5.9 of the genome annotation.

(FlyBase Genome Annotators, 2008)

Annotation CG14942 split into CG31757 and CG31758 in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

Other Comments

External Crossreferences & Linkouts

Sequence Crossreferences

RefSeq (Transcripts)

•

NM_001273469

RefSeq (Proteins)

•

NP_001260398

DDBJ / EMBL / GenBank

•

AGB92933

Entrez Gene - A searchable database of RefSeq genes.

•

14462750

Other Crossreferences

Linkouts

Synonyms & Secondary IDs ( 3 )

Reported As

Symbol Synonym

CG31758

(Findlay et al., 2009, Findlay et al., 2008, Riedl et al., 2005, Findlay et al., 2008)

CG42325

(FlyBase Genome Annotators, 2008)

CG44008

(FlyBase Genome Annotators, 2012, )

Name Synonym

Secondary FlyBase IDs

References ( 10 )

Research paper

Riedl et al., 2005, Behav. Genet. 35(3): 231--244: Drosophila soluble guanylyl cyclase mutants exhibit increased foraging locomotion: behavioral and genomic investigations. [FBrf0187131]

Supplementary material

Findlay et al., 2009, Genome Res. 19(5):: Supplemental Material. [FBrf0208111]
Findlay et al., 2008, PLoS Biol.:: Table S6. Novel D. melanogaster Genes Identified by a Six-Frame Translation Database Search and Confirmed by RACE and RT-PCR. [FBrf0205906]
Findlay et al., 2008, PLoS Biol. 6(7):: Table S2. High-Confidence Transferred Sfps Detected in Canton S and tudor Experiments. [FBrf0208306]

Personal communication to FlyBase

Bellen, 2012.4.12, set982.xml: set982.xml [FBrf0218018]
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center: RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]

FlyBase analysis

FlyBase Genome Annotators, 2012, Changes affecting gene model number or type in release 5.47 of the annotated D.melanogaster genome.: Changes affecting gene model number or type in release 5.47 of the annotated D.melanogaster genome. [FBrf0218597]
Curators, 2008--, Assigning Gene Ontology (GO) terms by sequence similarity in FlyBase.: Assigning Gene Ontology (GO) terms by sequence similarity in FlyBase. [FBrf0202953]
FlyBase Genome Annotators, 2008, Changes affecting gene model number or type in release 5.9 of the annotated D.melanogaster genome.: Changes affecting gene model number or type in release 5.9 of the annotated D.melanogaster genome. [FBrf0204763]
FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome.: Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]