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Gene Dmel\mamo

General Information
Symbol	Dmel\mamo	Species	D. melanogaster
Name	maternal gene required for meiosis	Annotation symbol	CG44132
Feature type	protein_coding_gene	FlyBase ID	FBgn0264981
Gene Model Status	Current	Stock availability	20 publicly available
Also Known As	CG34346, CG32611, CG11071, CG32606
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	12D1-12D1	Sequence location	X:13,740,216..13,879,887 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene maternal gene required for meiosis is referred to in FlyBase by the symbol Dmel\mamo (CG44132, FBgn0264981). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: sequence-specific DNA binding transcription factor activity. There is experimental evidence that it is involved in the biological process: female meiosis; sperm chromatin decondensation; gamete generation. 22 alleles are reported. The phenotypes of these alleles are annotated with: pole cell; synaptonemal complex. It has 7 annotated transcripts and 7 annotated polypeptides. Protein features are: BTB/POZ; BTB/POZ fold; BTB/POZ-like; Zinc finger C2H2-type/integrase DNA-binding domain; Zinc finger, C2H2; Zinc finger, C2H2-like. Gene sequence location is X:13740216..13879887.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 12D1-12D1   Limits computationally determined from genome sequence between P{EP}CG33174EP1101 and P{EP}EP1595EP1595
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\mamo for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.47 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) mamo-RC FBtr0335396  NM_001103508   4076   799 mamo-RD FBtr0335399  NM_001272610   5067   1087 mamo-RE FBtr0335400  NM_001201660   4409   1087 mamo-RF FBtr0335398  NM_001258733   4535   1109 mamo-RG FBtr0335397  NM_001258732   8487   1109 mamo-RH FBtr0335401  NM_167387   9378   1553 mamo-RI FBtr0335402  NM_132704   14043   1553
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein mamo-PC   FBpp0307379   82.7   799   4.50     NP_001096978   AAF48335 mamo-PD   FBpp0307382   111.1   1087   5.01     NP_001259539   AGB95381 mamo-PE   FBpp0307383   111.1   1087   5.01     NP_001188589   ADV37671 mamo-PF   FBpp0307381   113.5   1109   5.12     NP_001245662   AFH07376 mamo-PG   FBpp0307380   113.5   1109   5.12     NP_001245661   AFH07375 mamo-PH   FBpp0307384   162.4   1553   6.03     NP_727743   AAF48333 mamo-PI   FBpp0307385   162.4   1553   6.03     NP_572932   AAF48332
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2-like (IPR015880) Zinc finger C2H2-type/integrase DNA-binding domain (IPR013087) Zinc finger, C2H2 (IPR007087) BTB/POZ-like (IPR000210) BTB/POZ fold (IPR011333) BTB/POZ (IPR013069)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA736085   AE014298 AAF48332   AE014298 AAF48333   AE014298 AAF48335   AB235207 BAF31332   AE014298 ADV37671   AE014298 AFH07375   AE014298 AFH07376   AE014298 AGB95381   AI134150   AI518957   AY060979   BG637571   BI354951   BI354959   BI622806   BT022126   BT032854   BT072879   BT099708   BT133085   CO153240   CO153811   CO178303   CO186358   CO186586   CO187606   CO188186   CO190203   CO196355   CO262950   CO264524   CO265020   CO270070   CO270165   CO272901   CO274823   CO285176   CO286864   CO289276   CO292466   CO293795   CO294342   CO297804   CO300984   CO302249   CO307635   CO308103   CO308588   CO313770   CO314824   CO319289   CO320398   CO326690   CO328948   CO342233   CO343743   CO344579   CO344838   CO345238   EC062890   EC065494   EC072423   EC074289   EC075273   EC078056   EC078661   EC079471   EC082704   EC206937   EC208127   EC217881   EC217958   EC218417   EC218582   EC219525   EC222192   EC235585   EC247340   EC249430   EC262737   EC263634   EL879103   EL879158   EV586875   EV588909   EY198555
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IR63 Q9VY73 Q0EEE4 Q9VY72
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 13 -- 16   crystal cell   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
cytoplasm inferred from direct assay (Mukai et al., 2007) nucleus inferred from direct assay (Mukai et al., 2007)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    33 central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3  (33) central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    33 central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    33 central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    33 central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3  (33) central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    33 central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    33 central nervous system, pupae P8    12 head, virgin 1-day female    12 head, virgin 4-day female    11 head, virgin 20-day female    4 head, mated 1-day female    12 head, mated 4-day female    12 head, mated 20-day female    6 head, mated 1-day male    15 head, mated 4-day male    19 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    3 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    4 fat body, white prepupae    2 fat body, pupae P8    2 carcass, larvae L3 wandering    5 carcass, 1-day adult    12 carcass, 4-day adult    11 carcass, 20-day adult    5 ovary, virgin 4-day female    2 ovary, mated 4-day female    2 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    2 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    2 white prepupae new    3 white prepupae 12hr    2 white prepupae 24hr    3 pupae 2d postWPP    3 pupae 3d postWPP    1 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    4 adult male 30day    4 adult female 01day    4 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS    85 ovary OSC    67 ovary OSS    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS  (85) ovary OSC  (67) ovary OSS  (42) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS    85 ovary OSC    67 ovary OSS    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS    85 ovary OSC    67 ovary OSS    42 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS    85 ovary OSC    67 ovary OSS    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS  (85) ovary OSC  (67) ovary OSS  (42) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS    85 ovary OSC    67 ovary OSS    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    3 Schneider line 2 Sg4    8 embryonic 1182-4H    5 embryonic GM2    0 embryonic Kc167    6 embryonic S1    4 embryonic S3    3 leg disc CME L1    10 wing disc CME-W2    10 wing disc ML-DmD8    23 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    12 wing disc ML-DmD21    3 wing disc ML-DmD32    6 haltere disc ML-DmD17-c3    7 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    12 CNS ML-DmBG1-c1    19 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    5 ovary fGS/OSS    85 ovary OSC    67 ovary OSS    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    3 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    3 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    1 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    1 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    4 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    5 Paraquat 10 mM 48 hrs, 4-day adult    5 Rotenone 2 μg 12 hrs, larvae L3    1 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_04
External Data & Images
Linkouts	BDGP expression data • IP08939 RH54729
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal, with Scer\GAL4pnr-MD237 mamoGD15919 lethal | germline clone | late embryonic stage mamoSVA53 lethal | pupal stage, with Scer\GAL4pnr-MD237 mamoGD6408 lethal | third instar larval stage mamoSVA53 partially lethal - majority die | pupal stage, with Scer\GAL4pnr-MD237 mamoGD4306 viable, with Scer\GAL4pnr-MD237 mamoGD15313 Sterility Allele sterile mamoSVA53 Other Phenotypes Allele meiotic cell cycle defective | female mamoSVA53 visible, with Scer\GAL4pnr-MD237 mamoGD4306 Phenotype manifest in Allele chaeta | supernumerary, with Scer\GAL4pnr-MD237 mamoGD4306 pole cell mamoSVA53 synaptonemal complex mamoSVA53
Classical Alleles ( 9 )
For All Classical Alleles Show
Allele of mamo Class Mutagen Stocks Known lesion mamod04591 1 -- mamof07945 1 -- mamoG1184 P-element activity 1 -- mamoG1740 P-element activity 1 -- mamoG17505 P-element activity 1 -- mamoMB00043 1 -- mamoMI03311 1 -- mamod10885 0 -- mamoSVA53 ethyl methanesulfonate 0 Yes
Alleles Carried on Transgenic Constructs ( 13 )
For All Alleles Carried on Transgenic Constructs Show
Allele of mamo Class Mutagen Stocks Known lesion mamoGD15313 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes mamoGD16437 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes mamoGD4306 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes mamoGD6408 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes mamoGD15919 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes mamoGLV21091 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes mamoJF02330 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes mamoKK109929 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes mamoKK111443 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes mamoKK111772 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes mamoNIG.11075R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes mamoNIG.11082R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes mamoScer\UAS.P\T.T:Zzzz\FLAG in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(1)benCO1 (Mukai et al., 2007) Df(1)benCO2 (Mukai et al., 2007)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{KK111772} NA P{NIG.11075R} NA P{NIG.11082R} NA P{TRiP.GLV21091} NA P{UASp-mamo.FLAG} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}mamoG1184 NA P{EP}mamoG1740 NA P{EP}mamoG17505 NA P{XP}mamod04591 NA P{XP}mamod10885 NA miscellaneous insertions Mi{MIC}mamoMI03311 NA PBac{WH}mamof07945 NA insertion of enhancer trap binary system Mi{ET1}mamoMB00043 No
Gene Ontology: Function, Process & Cellular Component ( 8 unique terms )
Terms Based on Experimental Evidence ( 6 terms )
Molecular Function
CV term Evidence References
sequence-specific DNA binding transcription factor activity inferred from direct assay (Mukai et al., 2007)
Biological Process
CV term Evidence References
female meiosis inferred from mutant phenotype (Mukai et al., 2007) gamete generation inferred from mutant phenotype (Mukai et al., 2007) sperm chromatin decondensation inferred from mutant phenotype (Mukai et al., 2007)
Cellular Component
CV term Evidence References
cytoplasm inferred from direct assay (Mukai et al., 2007) nucleus inferred from direct assay (Mukai et al., 2007)
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
nucleic acid binding inferred from electronic annotation with InterPro:IPR013087 (FlyBase Curators et al., 2004-) inferred from sequence or structural similarity (FlyBase Genome Annotators, 2002-2003) sequence-specific DNA binding transcription factor activity inferred from sequence or structural similarity with EMBL:AF082568 (FlyBase, 1992-) zinc ion binding inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	gene_with_edited_transcript (Graveley et al., 2011) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions mamo allele Gene References
External Data
Linkouts
Orthologs
OrthoDB Orthologs (61) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6907WQ, EOG6HMJX0 Dipteran inclusive ortholog search EOG6MKNR6, EOG67PXGB Insect inclusive ortholog search EOG65DVK9, EOG6NP61C Arthropod inclusive ortholog search EOG6CNP6W, EOG608KQF Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6907WQ, EOG6HMJX0)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\mamo     Drosophila sechellia   Dsec\GM17579     Drosophila sechellia   Dsec\GM17578     Drosophila erecta   Dere\GG19480 Y   Drosophila erecta   Dere\GG19479     Drosophila yakuba   Dyak\GE16133 Y   Drosophila yakuba   Dyak\GE16131     Drosophila ananassae   Dana\GF19068     Drosophila ananassae   Dana\GF19067     Drosophila pseudoobscura pseudoobscura   Dpse\GA10742 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA22516     Drosophila willistoni   Dwil\GK25088 Y   Drosophila willistoni   Dwil\GK25085     Drosophila virilis   Dvir\GJ19127 Y   Drosophila mojavensis   Dmoj\GI21748 Y   Drosophila mojavensis   Dmoj\GI21747     Drosophila grimshawi   Dgri\GH17835 Y   Drosophila grimshawi   Dgri\GH17833
Orthologs in non-Drosophila Dipterans (EOG6MKNR6, EOG67PXGB)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL013651   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL013650   Anopheles gambiae Malaria mosquito  Agam\AGAP000585   Anopheles gambiae Malaria mosquito  Agam\AGAP000587   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ010170   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ010171
Orthologs in non-Dipteran Insects (EOG65DVK9, EOG6NP61C)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB50426   Apis mellifera Western honey bee  Amel\GB50425   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG010250   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG010248   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH14385   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH14384   Atta cephalotes Leafcutter ant  Acep\ACEP26248   Atta cephalotes Leafcutter ant  Acep\ACEP26251   Camponotus floridanus Florida carpenter ant  Cflo\CFLO26436   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL10472   Linepithema humile Argentine ant  Lhum\LH13658   Linepithema humile Argentine ant  Lhum\LH13666   Linepithema humile Argentine ant  Lhum\LH13665   Pogonomyrmex barbatus Red harvester ant  Pbar\PB16923   Solenopsis invicta Red fire ant  Sinv\SINV14062   Solenopsis invicta Red fire ant  Sinv\SINV23064   Solenopsis invicta Red fire ant  Sinv\SINV14073   Acyrthosiphon pisum Pea aphid  Apim\ACYPI49735   Acyrthosiphon pisum Pea aphid  Apim\ACYPI49734   Acyrthosiphon pisum Pea aphid  Apim\ACYPI006076   Bombyx mori Silkmoth  Bmor\BGIBMGA012518   Bombyx mori Silkmoth  Bmor\BGIBMGA012517   Pediculus humanus Human body louse  Phum\PHUM269220   Pediculus humanus Human body louse  Phum\PHUM269200   Pediculus humanus Human body louse  Phum\PHUM269210   Tribolium castaneum Red flour beetle  Tcas\TC011138   Tribolium castaneum Red flour beetle  Tcas\TC011137
Orthologs in non-Insect Arthropods (EOG6CNP6W, EOG608KQF)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\ACSBG1 Y Daphnia pulex Water flea  Dpux\Sld5 Y Daphnia pulex Water flea  Dpux\COI Y Daphnia pulex Water flea  Dpux\JGI_V11_347243 Y Daphnia pulex Water flea  Dpux\TwdlJ Y Daphnia pulex Water flea  Dpux\JGI_V11_312078   Ixodes scapularis Deer tick  Isca\ISCW016371 Y Ixodes scapularis Deer tick  Isca\ISCW010367 Y Ixodes scapularis Deer tick  Isca\ISCW016996 Y Ixodes scapularis Deer tick  Isca\ISCW019463 Y
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD15866 Drosophila sechellia Dsec\GM17575 Drosophila erecta Dere\GG19475 Drosophila erecta Dere\GG19480 Drosophila yakuba Dyak\GE16133 Drosophila pseudoobscura pseudoobscura Dpse\GA10742 Drosophila willistoni Dwil\GK25088 Drosophila virilis Dvir\GJ19127 Drosophila mojavensis Dmoj\GI21748 Drosophila grimshawi Dgri\GH17835
Stocks & Reagents
Stocks Listed in FlyBase ( 20 )
Bloomington	33560 w* P{EP}mamoG1740
Harvard	- P{XP}mamod04591 - PBac{WH}mamof07945
VDRC	v104535 P{KK109929}VIE-260B v108769 P{KK111443}VIE-260B v37616 w1118 P{GD4306}v37616 v38223 w1118 P{GD6408}v38223 v29874 w1118; P{GD15313}v29874 v29875 w1118; P{GD15313}v29875 v48679 w1118; P{GD16437}v48679 v48680 w1118; P{GD16437}v48680 v37615 w1118; P{GD4306}v37615/CyO
	More stocks available...
Genomic Clones ( 2 )
	BACR22M24 BACR28F21 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 76 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM13088 IP08939 LP16229 RH54729
Other clones	FI17807 MIP06874
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH11525 GM13312 GM29022 GM29051
Other clones	30643 39530 59105 59957 71876 74293 76732 118505 148982 162760 179032 283740 522203 522827 CK01.32C.C7 CK01.36A.F6 CK01.58B.H4 CK01.63D.H6 CK01.70D.D8 CK01.103C.D7 CK01.127C.H4 Dmel_neb_009587_0126_2169 Dmel_neb_013155_0139_1427 DMG2-chrX.14.093.a EK003335 EK019017 EK021340 EK030742 EK038315 EK046962 EK056348 EK064063 EK070636 EK086916 EK097310 EK097747 EK108746 EK115603 EK139456 EK141243 EK168434 EK170563 EK179834 EK183735 EK200241 EK204842 EK206616 EK234031 EK237861 EK255134 EK256639 EK258762 EK277550 EK284713 EK291724 EN01544 EN02854 EP04447 EP14234 EP17941 EP19534 EP19963 EP21654 GM10965 IP09039 IP09139
RNAi & Array Information
Linkouts
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: mamo CG34346 (Mukai et al., 2007)
Source for database merge of	Source for merge of: CG11072 CG32611 (FlyBase Genome Annotators, 2007) Source for merge of: mamo CG11071 (FlyBase Genome Annotators, 2012) Source for merge of: mamo CG32606 (FlyBase Genome Annotators, 2011)
Additional comments	Annotations CG34346 and CG11071 merged as CG44132 in release 5.47 of the genome annotation. Merge supported by RNA-seq junction data. (FlyBase Genome Annotators, 2012) Annotation CG32606 merged with annotation CG34346 in release 5.36 of the genome annotation; CG32606 corresponds to 5' UTR of CG34346. (FlyBase Genome Annotators, 2011) Annotations CG11072 and CG32611 merged as CG34346 in release 5.2 of the genome annotation. (FlyBase Genome Annotators, 2007) Annotations CG11075, CG11082 merged as CG32611 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
Other Comments
	When dsRNA made from templates generated with primers directed against this gene. (Mukai et al., 2007) New annotation (CG32606) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132704 NM_167387 NM_001103508 NM_001201660 NM_001258732 NM_001258733 NM_001272610 RefSeq (Proteins) • NP_572932 NP_727743 NP_001096978 NP_001188589 NP_001245661 NP_001245662 NP_001259539 DDBJ / EMBL / GenBank • AAF48332 AAF48333 AAF48335 AAN09574 AB235207 ADV37671 AFH07375 AFH07376 AGB95381 BAF31332 BI354959 BI622806 Entrez Gene - A searchable database of RefSeq genes. • 32353 32354 318111 UniProtKB/TrEMBL • Q0EEE4 Q8IR63 Q9VY72 Q9VY73
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2-like (IPR015880) Zinc finger C2H2-type/integrase DNA-binding domain (IPR013087) Zinc finger, C2H2 (IPR007087) BTB/POZ-like (IPR000210) BTB/POZ fold (IPR011333) BTB/POZ (IPR013069) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • IP08939 RH54729
Linkouts
Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym	CG11071 (Alekseyenko et al., 2006, Mukai et al., 2007, Perkins et al., 2009.3.31, Keleman et al., 2009.8.5) CG11072 (Hoskins et al., 2005, ) CG11075   CG11082   CG32606 (Turner et al., 2008, Keleman et al., 2009.8.5) CG32611 (Hoskins et al., 2005, Nelson et al., 2005, Junion et al., 2007, Maeng et al., 2012) CG34346 (Japanese National Institute of Genetics, 2012.5.21, Ni et al., 2011.7.19, FlyBase Genome Annotators, 2007, Keleman et al., 2009.8.5) CG44132 (FlyBase Genome Annotators, 2012) mamo (Luo et al., 2011, FlyBase Genome Annotators, 2011, Mukai et al., 2007, Popodi et al., 2010-)
Name Synonym	CG11072   CG32611   maternal gene required for meiosis
Secondary FlyBase IDs
	FBgn0030532 FBgn0030533 FBgn0030534 FBgn0030535 FBgn0052606 FBgn0052611 FBgn0085375 FBgn0263115
References ( 34 )
Generate a list of	All references relating to this gene ( 34 )
List References by type	Research paper  ( 9 ) Supplementary material  ( 3 ) Personal communication to FlyBase  ( 10 ) FlyBase analysis  ( 6 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 3 ) DNA/RNA sequence record  ( 1 )
Recent research papers ( 3 )
	Maeng et al., 2012, Mol. Cells 33(5): 457--463 The BTB/POZ-ZF transcription factor dPLZF is involved in Ras/ERK signaling during Drosophila wing development. [FBrf0218378] Weber et al., 2012, PLoS ONE 7(4): e34745 Genome-Wide Association Analysis of Oxidative Stress Resistance in Drosophila melanogaster. [FBrf0218073] Luo et al., 2011, Development 138(13): 2761--2771 Direct targets of the D. melanogaster DSXF protein and the evolution of sexual development. [FBrf0213878] Show all research papers ...