Please see the JBrowse view of Dmel\Gyg for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.49
Genes with CDS overlap: isoforms of Glycogenin and CG44245 share promoter, first exon and N-terminal coding sequences (28 residues); overlapping structure not conserved outside of Drosophila.
Gene model reviewed during 5.45
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Low-frequency RNA-Seq exon junction(s) not annotated.
None of the polypeptides share 100% sequence identity.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Gyg using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: maternally deposited
Comment: reported as muscle system primordium
Comment: reported as muscle system primordium
JBrowse - Visual display of RNA-Seq signals
View Dmel\Gyg in JBrowse2-94
2-100.3
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for merge of: Glycogenin NEST:bs16a02
Annotation CG9480 split into CG44244 (which corresponds to Glycogenin) and CG44245 in release 5.49 of the genome annotation. The two annotations share a common 5' exon which encodes 3 N-terminal amino acid residues, but otherwise encode two distinct proteins.
Source for identity of: Glycogenin CG9480
Source for identity of: Gyg Glycogenin
The 'Glycogenin' gene previously had no abbreviated gene symbol - assigning 'Gyg' to mirror the symbol used for the vertebrate 'Glycogenin' genes.
