A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\CG17097

General Information
SymbolDmel\CG17097SpeciesD. melanogaster
NameAnnotation symbolCG17097
Feature typeprotein_coding_geneFlyBase IDFBgn0265264
Gene Model StatusCurrent Stock availability 4 publicly available
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map32A2-32A2Sequence location2L:10,646,415..10,650,152 [+]

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Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG17097 (FBgn0265264). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: lipase activity; triglyceride lipase activity. There is experimental evidence that it is involved in the biological process: multicellular organism reproduction. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Alpha/beta hydrolase fold-1; Lipase, eukaryotic; Partial AB-hydrolase lipase domain. Gene sequence location is 2L:10646415..10650152.

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Description
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FB2013_03
FB2013_02
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
32A2-32A2  
Limits computationally determined from genome sequence between P{lacW}l(2)k09116k09116&P{lacW}Fatpk10307 and P{PZ}dbf1  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Please see the GBrowse view of Dmel\CG17097 for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0300805 FBtr0339130 FBtr0080101 FBtr0342582 FBtr0080103 FBpp0308275 FBpp0290029 FBpp0290352 FBpp0079692 FBti0077730 FBti0150192 FBti0053529 FBti0003464
Comments on Gene Model
Gene model reviewed during 5.49
Low-frequency RNA-Seq exon junction(s) not annotated.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0080101
  3392
  1087
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0290352  
120.6  
1087  
8.88  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
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Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
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Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
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FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
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modENCODE Temporal Expression Data (Graveley et al., 2011)
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hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
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Linkouts
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 2 )
For All Classical Alleles Show

Allele of CG17097ClassMutagenStocksKnown lesion
CG17097MB01068
1 --
CG17097MI06556
1 --
hide Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG17097ClassMutagenStocksKnown lesion
CG17097GD55082 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap binary system
miscellaneous insertions
hide Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
hide Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
Cellular Component
CV term
References
hide Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity
inferred from sequence or structural similarity with EMBL:Z31689
Biological Process
CV term
References
inferred from electronic annotation with InterPro:IPR006693
inferred from sequence or structural similarity
Cellular Component
CV term
References
inferred from sequence model
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hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
CG17097 allele
Gene
References
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Linkouts
hide Orthologs
hide OrthoDB Orthologs (158) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG6DJKG7)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila ananassae
 
 
 
Drosophila pseudoobscura pseudoobscura
 
 
 
Drosophila pseudoobscura pseudoobscura
 
 
 
Drosophila virilis
 
Y
 
Drosophila mojavensis
 
Y
 
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
hideOrthologs in non-Dipteran Insects (EOG6X3FWS)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\LOC411353
Y
Apis mellifera
Western honey bee 
Amel\GB47273
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG000676
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG012250
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG019692
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005392
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG012251
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005394
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG015101
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG009087
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG012249
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH12867
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH10354
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH10260
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH10261
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH13828
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH12868
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH19298
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH11420
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP22570
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP15106
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP16011
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP20833
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10458
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP20840
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO22702
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13544
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13578
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO18186
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO23619
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO19402
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO23625
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO23434
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO17097
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14837
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13542
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO15976
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO19094
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13545
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL17444
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL21918
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL19482
Y
Linepithema humile
Argentine ant 
Lhum\LH10246
Y
Linepithema humile
Argentine ant 
Lhum\LH10253
Y
Linepithema humile
Argentine ant 
Lhum\LH26033
Y
Linepithema humile
Argentine ant 
Lhum\LH26031
Y
Linepithema humile
Argentine ant 
Lhum\LH23368
Y
Linepithema humile
Argentine ant 
Lhum\LH26024
Y
Linepithema humile
Argentine ant 
Lhum\LH23362
Y
Linepithema humile
Argentine ant 
Lhum\LH26032
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB12920
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB13757
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18834
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB12919
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18837
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18833
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV13600
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV12470
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV13606
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV16810
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV12257
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV13603
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV20246
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV13608
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV13607
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV20733
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Pediculus humanus
Human body louse 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
hideOrthologs in non-Insect Arthropods (EOG6GTHV9)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
hideOrthologs in non-Arthropod Metazoa (EOG6CRZSM)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Danio rerio
Zebrafish 
Y
Xenopus tropicalis
Western clawed frog 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
hide Human Orthologs (6)
Gene
OMIM
HGNC
 
 
 
 
 
 
 
 
 
 
 
 
hideAAA Orthologs (8) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila persimilis
Drosophila virilis
Drosophila mojavensis
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Bloomington
VDRC
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Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Source for database identity of
Source for database merge of
Source for merge of: CG17097 anon-SAGE:Wang-018
Additional comments
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Isolated in a screen for seminal fluid proteins.
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
anon-SAGE:Wang-018
 
Name Synonym
anon-SAGE:Wang-018
 
Secondary FlyBase IDs
  • FBgn0032275
  • FBgn0066980
hide References ( 27 )
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hide Recent research papers ( 3 )
Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784
GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834]
Dottorini et al., 2011, BMC Bioinformatics 12: 34
Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. [FBrf0214379]
Rees et al., 2011, Mol. Cell. Proteomics 10(6): M110.002386
In Vivo Analysis of Proteomes and Interactomes Using Parallel Affinity Capture (iPAC) Coupled to Mass Spectrometry. [FBrf0213845]
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All reviews listed in FlyBase were published before 2011