FB2025_01 , released February 20, 2025
Gene: Dmel\CG3164
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General Information
Symbol
Dmel\CG3164
Species
D. melanogaster
Name
Annotation Symbol
CG3164
Feature Type
protein_coding_gene
FlyBase ID
FBgn0288229
Gene Model Status
Current
Stock Availability
18 publicly available
Gene Summary
Contribute a Gene Snapshot for this gene.
All Summaries
Also Known As

l(2)21Ba, BEST:CK02656

Key Links
Genomic Location
Cytogenetic map
21B2-21B2
Sequence location
Recombination map
2-0.5
RefSeq locus
NT_033779 REGION:122624..130791
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
Gene Ontology (GO) Annotations (7 terms)
Molecular Function (4 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (4 terms)
CV Term
Evidence
References
enables ABC-type transporter activity
inferred from electronic annotation with InterPro:IPR013525, InterPro:IPR043926
(InterPro Project Members, 2004-)
enables ATP binding
inferred from electronic annotation with InterPro:IPR003439, InterPro:IPR017871
(InterPro Project Members, 2004-)
enables ATP hydrolysis activity
inferred from electronic annotation with InterPro:IPR003439, InterPro:IPR003593, InterPro:IPR017871
(InterPro Project Members, 2004-)
enables ATPase-coupled transmembrane transporter activity
inferred from sequence or structural similarity with UniProtKB:P10090
(Gene Ontology Curators, 2002-)
inferred from biological aspect of ancestor with PANTHER:PTN008283605
(GO Reference Genome Project, 2011-)
Biological Process (1 term)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
involved_in transmembrane transport
inferred from sequence or structural similarity with UniProtKB:P10090
(Gene Ontology Curators, 2002-)
inferred from biological aspect of ancestor with PANTHER:PTN008283605
(GO Reference Genome Project, 2011-)
Cellular Component (2 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
located_in membrane
inferred from electronic annotation with InterPro:IPR013525
(InterPro Project Members, 2004-)
is_active_in plasma membrane
inferred from biological aspect of ancestor with PANTHER:PTN000443095
(GO Reference Genome Project, 2011-)
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Catalytic Activity (EC/Rhea)
ATP hydrolysis activity
RHEA 13065:
Summaries
Gene Group (FlyBase)
ABCG ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY -
The ATP-binding cassette (ABC) transporter family are primary active transporters that use ATP hydrolysis to drive the transport of substrates across the membrane. In metazoans the ABCG subfamily are half transporters. Half transporters must dimerize to form a functional transporter. (Adapted from FBrf0224053).
Gene Model and Products
Number of Transcripts
4
Number of Unique Polypeptides
2

Please see the JBrowse view of Dmel\CG3164 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry Q8IPV3)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Gene model reviewed during 5.48

GC splice donor site postulated

Gene model reviewed during 5.44

Low-frequency RNA-Seq exon junction(s) not annotated.

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
CG3164-RA
FBtr0078153
NM_164366
2759
699
CG3164-RB
FBtr0078154
NM_134650
2778
698
CG3164-RC
FBtr0078155
NM_205881
2845
699
CG3164-RD
FBtr0100379
NM_001038776
2864
698
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
CG3164-PA
FBpp0077812
78.4
699
9.01
Q8IPV3
NP_722605
AAN10508
CG3164-PB
FBpp0077813
78.1
698
9.02
Q9VPJ9
NP_608494
AAF51548
CG3164-PC
FBpp0089109
78.4
699
9.01
Q8IPV3
NP_995603
AAS64637
CG3164-PD
FBpp0099791
78.1
698
9.02
Q9VPJ9
NP_001033865
ABC65871
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

698 aa isoforms: CG3164-PB, CG3164-PD
699 aa isoforms: CG3164-PA, CG3164-PC
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\CG3164 using the Feature Mapper tool.

External Data
Crossreferences
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-1.16

Transcript Expression
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
adult stage
adult head
(Aradska et al., 2015)
day 7 of adulthood -- day 49 of adulthood
adult heart
(Cammarato et al., 2011)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\CG3164 in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Images
FlyBase Wiki
Image Based Resources
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 21 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 8 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of CG3164
Transgenic constructs containing regulatory region of CG3164
Aberrations (Deficiencies and Duplications) ( 26 )
Inferred from experimentation ( 26 )
Gene disrupted in
Df(2L)ED5878
(Miller et al., 2020, Kahsai and Cook, 2018)
Df(2L)ED50001
(Miller et al., 2020)
Df(2L)Exel6001
(Miller et al., 2020, Kahsai and Cook, 2018)
Df(2L)net18
(Miller et al., 2020)
Df(2L)net-PMF
(Caggese et al., 1994)
Df(2L)PM1
(Larsson et al., 1996, Caggese et al., 1994, Caggese et al., 1988)
Df(2L)PM44
(Miller et al., 2020)
Df(2L)PM45
(Miller et al., 2020, Larsson et al., 1996, Caggese et al., 1988)
Df(2L)PM51
(Larsson et al., 1996, Caggese et al., 1988)
Df(2L)PM59
(Caggese et al., 1994, Caggese et al., 1988)
Df(2L)PM85
(Larsson et al., 1996)
Df(2L)PM91
(Caggese et al., 1988)
Df(2L)PMA
(Miller et al., 2020)
Df(2L)PMD
(Miller et al., 2020)
Df(2L)PMG
(Miller et al., 2020, Larsson et al., 1996, Caggese et al., 1994, Caggese et al., 1988)
Df(2L)TE21A
(Caggese et al., 1994, Caggese et al., 1988)
Gene not disrupted in
Df(2L)BSC106
(Kahsai and Cook, 2018)
Df(2L)BSC454
(Kahsai and Cook, 2018)
Df(2L)ED19
(Kahsai and Cook, 2018)
Df(2L)ED50001
(Kahsai and Cook, 2018)
Df(2L)net3
(Larsson et al., 1996)
Df(2L)net18
(Miller et al., 2020, Larsson et al., 1996)
Df(2L)net62
(Miller et al., 2020)
Df(2L)net78;30
(Larsson et al., 1996)
Df(2L)PM4
(Larsson et al., 1996)
Df(2L)PM11
(Larsson et al., 1996)
Df(2L)PM44
(Miller et al., 2020, Larsson et al., 1996, Caggese et al., 1994, Caggese et al., 1988)
Df(2L)PM73
(Caggese et al., 1988)
Df(2L)PM82
(Caggese et al., 1988)
Df(2L)PMA
(Larsson et al., 1996)
Df(2L)PMD
(Larsson et al., 1996, Caggese et al., 1994)
Inferred from location ( 4 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
Orthologs
Downloads
Download All DIOPT Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
Domainoid
eggNOG
Hieranoid
Homologene
Inparanoid
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
SonicParanoid
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (7)
Hsap\ABCG1
9 of 14
Yes
No
Hsap\ABCG4
9 of 14
Yes
No
Hsap\ABCG2
6 of 14
No
No
Hsap\ABCG8
6 of 14
No
No
Hsap\ABCG5
2 of 14
No
No
Hsap\ABCB9
1 of 14
No
No
Hsap\ABCB11
1 of 14
No
No
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
Domainoid
eggNOG
Hieranoid
Homologene
Inparanoid
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
SonicParanoid
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (8)
Rnor\Abcg1
9 of 14
Yes
No
Rnor\Abcg4
9 of 14
Yes
No
Rnor\Abcg2
6 of 14
No
No
Rnor\Abcg3l1
6 of 14
No
No
Rnor\Abcg3l3
5 of 14
No
No
Rnor\Abcg8
5 of 14
No
No
Rnor\Abcg5
3 of 14
No
No
Rnor\Abcg3
1 of 14
No
Yes
Mus musculus (laboratory mouse) (6)
Mmus\Abcg1
9 of 14
Yes
No
Mmus\Abcg4
8 of 14
No
No
Mmus\Abcg2
6 of 14
No
No
Mmus\Abcg8
6 of 14
No
No
Mmus\Abcg3
5 of 14
No
No
Mmus\Abcg5
3 of 14
No
No
Xenopus tropicalis (Western clawed frog) (7)
Xtro\abcg4
8 of 13
Yes
No
Xtro\abcg1
5 of 13
No
No
Xtro\abcg2
3 of 13
No
No
Xtro\abcg5
2 of 13
No
No
Xtro\abcg8
1 of 13
No
No
Xtro\LOC100494753
1 of 13
No
No
Xtro\LOC116406449
1 of 13
No
No
Danio rerio (Zebrafish) (9)
Drer\abcg1
10 of 14
Yes
No
Drer\abcg4b
10 of 14
Yes
No
Drer\abcg4a
9 of 14
No
No
Drer\abcg2b
6 of 14
No
No
Drer\abcg2c
6 of 14
No
No
Drer\abcg2a
5 of 14
No
No
Drer\abcg2d
5 of 14
No
No
Drer\abcg8
5 of 14
No
No
Drer\abcg5
3 of 14
No
No
Caenorhabditis elegans (Nematode, roundworm) (16)
Cele\wht-1
6 of 14
Yes
No
Cele\wht-2
6 of 14
Yes
No
Cele\wht-3
6 of 14
Yes
No
Cele\wht-4
6 of 14
Yes
No
Cele\wht-5
6 of 14
Yes
No
Cele\wht-6
6 of 14
Yes
No
Cele\wht-8
6 of 14
Yes
No
Cele\abcx-1
3 of 14
No
No
Cele\wht-7
3 of 14
No
No
Cele\abch-1
2 of 14
No
No
Cele\haf-4
1 of 14
No
No
Cele\pgp-2
1 of 14
No
No
Cele\pgp-6
1 of 14
No
No
Cele\pgp-7
1 of 14
No
No
Cele\pgp-12
1 of 14
No
No
Cele\Y45F10C.6
1 of 14
No
Yes
Anopheles gambiae (African malaria mosquito) (24)
Agam\AgaP_AGAP009850
12 of 12
Yes
Yes
Agam\AgaP_AGAP009463
6 of 12
No
No
Agam\AgaP_AGAP000506
5 of 12
No
No
Agam\AgaP_AGAP001333
5 of 12
No
No
Agam\AgaP_AGAP008889
5 of 12
No
No
Agam\AgaP_AGAP008945
5 of 12
No
No
Agam\AgaP_AGAP009464
5 of 12
No
No
Agam\AgaP_AGAP009466
5 of 12
No
No
Agam\AgaP_AGAP009467
5 of 12
No
No
Agam\AgaP_AGAP009468
5 of 12
No
No
Agam\AgaP_AGAP009471
5 of 12
No
No
Agam\AgaP_AGAP009472
5 of 12
No
No
Agam\WHITE_ANOGA
5 of 12
No
No
Agam\AgaP_AGAP001858
4 of 12
No
No
Agam\AgaP_AGAP002051
3 of 12
No
No
Agam\AgaP_AGAP007655
3 of 12
No
No
Agam\AgaP_AGAP009469
3 of 12
No
No
Agam\AgaP_AGAP009470
3 of 12
No
Yes
Agam\AgaP_AGAP002050
2 of 12
No
No
Agam\AgaP_AGAP013384
2 of 12
No
Yes
Agam\AgaP_AGAP006379
1 of 12
No
No
Agam\AgaP_AGAP009465
1 of 12
No
No
Agam\AgaP_AGAP009851
1 of 12
No
Yes
Agam\AgaP_AGAP013198
1 of 12
No
No
Arabidopsis thaliana (thale-cress) (53)
Atha\ABCG6
7 of 13
Yes
Yes
Atha\ABCG9
7 of 13
Yes
No
Atha\ABCG14
7 of 13
Yes
No
Atha\ABCG17
7 of 13
Yes
Yes
Atha\ABCG21
7 of 13
Yes
No
Atha\ABCG22
7 of 13
Yes
No
Atha\ABCG25
7 of 13
Yes
No
Atha\ABCG26
7 of 13
Yes
No
Atha\ABCG27
7 of 13
Yes
No
Atha\ABCG1
6 of 13
No
Yes
Atha\ABCG2
6 of 13
No
Yes
Atha\ABCG7
6 of 13
No
No
Atha\ABCG10
6 of 13
No
Yes
Atha\ABCG16
6 of 13
No
Yes
Atha\ABCG18
6 of 13
No
Yes
Atha\ABCG19
6 of 13
No
Yes
Atha\ABCG20
6 of 13
No
Yes
Atha\ABCG4
5 of 13
No
Yes
Atha\ABCG5
5 of 13
No
Yes
Atha\ABCG8
5 of 13
No
Yes
Atha\ABCG11
5 of 13
No
No
Atha\ABCG15
5 of 13
No
No
Atha\ABCG23
5 of 13
No
Yes
Atha\ABCG12
4 of 13
No
No
Atha\ABCG13
4 of 13
No
No
Atha\ABCG24
4 of 13
No
Yes
Atha\NAP12
4 of 13
No
Yes
Atha\ABCG3
3 of 13
No
Yes
Atha\ABCG28
3 of 13
No
No
Atha\ABCG29
2 of 13
No
No
Atha\ABCG30
2 of 13
No
No
Atha\ABCG31
2 of 13
No
No
Atha\ABCG33
2 of 13
No
No
Atha\ABCG34
2 of 13
No
No
Atha\ABCG35
2 of 13
No
No
Atha\ABCG37
2 of 13
No
No
Atha\ABCG38
2 of 13
No
No
Atha\ABCG39
2 of 13
No
No
Atha\ABCG40
2 of 13
No
No
Atha\ABCG41
2 of 13
No
No
Atha\ABCG42
2 of 13
No
No
Atha\ABCG43
2 of 13
No
No
Atha\AT3G21080
2 of 13
No
Yes
Atha\PEN3
2 of 13
No
No
Atha\ABCB4
1 of 13
No
No
Atha\ABCB7
1 of 13
No
No
Atha\ABCB13
1 of 13
No
No
Atha\ABCB14
1 of 13
No
No
Atha\ABCB21
1 of 13
No
No
Atha\ABCG32
1 of 13
No
No
Atha\ABCI1
1 of 13
No
No
Atha\ABCI11
1 of 13
No
No
Atha\ABCI17
1 of 13
No
No
Saccharomyces cerevisiae (Brewer's yeast) (12)
Scer\ADP1
7 of 13
Yes
No
Scer\YOL075C
4 of 13
No
No
Scer\PDR10
3 of 13
No
No
Scer\SNQ2
3 of 13
No
No
Scer\AUS1
2 of 13
No
No
Scer\PDR5
2 of 13
No
No
Scer\PDR11
2 of 13
No
No
Scer\PDR12
2 of 13
No
No
Scer\PDR15
2 of 13
No
No
Scer\PDR18
2 of 13
No
No
Scer\ARB1
1 of 13
No
No
Scer\MDL1
1 of 13
No
No
Schizosaccharomyces pombe (Fission yeast) (2)
Spom\bfr1
3 of 12
Yes
No
Spom\pdr1
2 of 12
No
No
Escherichia coli (enterobacterium) (22)
Ecol\artP
2 of 11
Yes
No
Ecol\cysA
2 of 11
Yes
Yes
Ecol\lolD
2 of 11
Yes
Yes
Ecol\metN
2 of 11
Yes
Yes
Ecol\mlaF
2 of 11
Yes
Yes
Ecol\potA
2 of 11
Yes
Yes
Ecol\potG
2 of 11
Yes
Yes
Ecol\proV
2 of 11
Yes
Yes
Ecol\ugpC
2 of 11
Yes
Yes
Ecol\afuC
1 of 11
No
No
Ecol\fetA
1 of 11
No
Yes
Ecol\ftsE
1 of 11
No
No
Ecol\glnQ
1 of 11
No
No
Ecol\gltL
1 of 11
No
Yes
Ecol\hisP
1 of 11
No
Yes
Ecol\malK
1 of 11
No
No
Ecol\nikE
1 of 11
No
Yes
Ecol\pstB
1 of 11
No
Yes
Ecol\tcyN
1 of 11
No
Yes
Ecol\thiQ
1 of 11
No
No
Ecol\yehX
1 of 11
No
Yes
Ecol\yhdZ
1 of 11
No
Yes
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:CG3164. Refer to their site for version information.
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v9.1)
Gene Symbol
Score
Source
Compara
Domainoid
eggNOG
Homologene
Inparanoid
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
SonicParanoid
Alignment
Drosophila melanogaster (Fruit fly) (16)
Atet
10 of 13
CG5853
10 of 13
CG9663
10 of 13
w
9 of 13
CG4822
8 of 13
CG9664
8 of 13
CG17646
8 of 13
CG31689
8 of 13
CG32091
8 of 13
E23
8 of 13
st
7 of 13
bw
5 of 13
CG11069
4 of 13
CG31121
4 of 13
Mdr50
1 of 13
rdog
1 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    ABCG1; ATP binding cassette subfamily G member 1
    9 of 14
    603076
        ABCG4; ATP binding cassette subfamily G member 4
        9 of 14
        607784
            ABCG2; ATP binding cassette subfamily G member 2 (JR blood group)
            6 of 14
            603756
              ABCG8; ATP binding cassette subfamily G member 8
              6 of 14
              605460
              Functional Complementation Data
              Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
              Interactions
              Summary of Physical Interactions
              esyN Network Diagram
              Show neighbor-neighbor interactions:
              Show/hide secondary interactors 
              (data from AllianceMine provided by esyN)
              Select Layout:
              Legend:
              Protein
              RNA
              Selected Interactor(s)
              Other Interaction Browsers
              View in FlyBase Interactions Browser   View in MIST tool (external link)
              Please see the Physical Interaction reports below for full details
              protein-protein
              Physical Interaction
              Assay
              References
              CG3164 - CG10916
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG12012
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG14767
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG15098
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG2065
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG2070
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG31729
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG5447
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - CG7668
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Frl
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - KdelR
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Kr-h2
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - MRP
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Mec2
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Ost48
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - OstΔ
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Ostγ
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Pvr
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Rab4
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Rap1
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Rap2l
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Rdh1
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Rer1
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - SERCA
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Scamp
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Sec61α
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Surf4
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Syb
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Syx7
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Tecr
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - Tmep
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - ZnT63C
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - fax
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - jagn
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - osk
              anti tag coimmunoprecipitation, Identification by mass spectrometry
              (Hurd et al., 2016)
              CG3164 - porin
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - sax
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - sty
              experimental knowledge based
              (Guruharsha et al., 2011)
              CG3164 - tkv
              experimental knowledge based
              (Guruharsha et al., 2011)
              Summary of Genetic Interactions
              esyN Network Diagram
              Other Interaction Browsers
              Starting gene(s)
              Interaction type
              Interacting gene(s)
              Reference
              Starting gene(s)
              Interaction type
              Interacting gene(s)
              Reference
              External Data
              Linkouts
              Pathways
              Signaling Pathways (FlyBase)
              Metabolic Pathways
              FlyBase
              External Links
              External Data
              Linkouts
              KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
              Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
              Class of Gene
              Genomic Location and Detailed Mapping Data
              Chromosome (arm)
              2L
              Recombination map
              2-0.5
              Cytogenetic map
              21B2-21B2
              Sequence location
              FlyBase Computed Cytological Location
              Cytogenetic map
              Evidence for location
              21B2-21B2
              Limits computationally determined from genome sequence between P{lacW}spenk06805&P{lacW}l(2)k13604k13604 and P{lacW}U2af38k14504
              Experimentally Determined Cytological Location
              Cytogenetic map
              Notes
              References
              The l(2)21Ba complementation group maps to the genomic interval 2L:67365..159063 , release 6 genome (left limit from complementation mapping against Df(2L)ED5878, right limit from complementation mapping against Df(2L)ED19).
              (Kahsai and Cook, 2018)
              Experimentally Determined Recombination Data
              Location

              2-0.5

              (FlyBase, 2016)

              2-0.0

              (Comeron et al., 2012)

              2-[0.0]

              Left of (cM)
              Right of (cM)
              Notes
              Stocks and Reagents
              Stocks (18)
              Genomic Clones (19)
              cDNA Clones (29)
               

              Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

              cDNA clones, fully sequenced
              BDGP DGC clones
              Other clones
                Drosophila Genomics Resource Center cDNA clones

                For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

                  cDNA Clones, End Sequenced (ESTs)
                  BDGP DGC clones
                    Other clones
                    RNAi and Array Information
                    Linkouts
                    Antibody Information
                    Laboratory Generated Antibodies
                     
                    Commercially Available Antibodies
                     
                    Cell Line Information
                    Publicly Available Cell Lines
                     
                      Other Stable Cell Lines
                       
                        Other Comments

                        Identification: cDNA screen for secreted and transmembrane proteins expressed during embryogenesis.

                        (Kopczynski et al., 1998)
                        Relationship to Other Genes
                        Source for database merge of

                        Source for merge of: BEST:CK02656 CG3164

                        (Bayraktaroglu, 2000.11.2)

                        Source for merge of: CG3164 l(2)21Ba

                        (Miller et al., 2020)
                        Additional comments

                        The l(2)21Ba complementation group corresponds to one (or more) of the following annotated genes: dbr, CR44987, galectin, CG11374, net, Zir, CG11377, Nhe1, ND-15, CG13694, CG4822, CG3164, CR44969, CR44185, CR44186, ovm, CG31975, CG31974, CG11454, CG42399, CG3709, CG3436, CG33635.

                        (Kahsai and Cook, 2018)
                        Nomenclature History
                        Source for database identify of
                        Nomenclature comments
                        Etymology
                        Synonyms and Secondary IDs (6)
                        Datasets (0)
                        Study focus (0)
                        Experimental Role
                        Project
                        Project Type
                        Title
                        Study result (0)
                        Result
                        Result Type
                        Title
                        External Crossreferences and Linkouts ( 54 )
                        Sequence Crossreferences
                        NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
                        GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
                        GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
                        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
                        UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
                        UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
                        Other crossreferences
                        AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
                        DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
                        EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
                        FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
                        InterPro - A database of protein families, domains and functional sites
                        KEGG Genes - Molecular building blocks of life in the genomic space.
                        MARRVEL_MODEL - MARRVEL (model organism gene)
                        Linkouts
                        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
                        FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
                        FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.
                        iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
                        KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
                        Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
                        References (72)