FlyBase Gene Report: Dmel\Ype

General Information

Symbol

Dmel\Ype

Species

D. melanogaster

Name

Yippee

Annotation Symbol

CG1989

Feature Type

protein_coding_gene

FlyBase ID

FBgn0288857

Gene Model Status

Current

Stock Availability

13 publicly available

Gene Summary

Yippee (Ype) encodes a predicted member of the E3 ubiquitin ligase complex. It has roles in adult cuticle pigmentation, wing morphology, bristle formation, developmental rate, and adult emergence. [Date last reviewed: 2022-05-19] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Red Book
Interactive Fly

Also Known As

sable, s, eb

Key Links

Genomic Location

Cytogenetic map

11F1-11F1

Sequence location

X:13,385,914..13,387,417 [-]

Recombination map

1-43

RefSeq locus

NC_004354 REGION:13385914..13387417

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (5 terms)

Molecular Function (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

enables metal ion binding

non-traceable author statement

(Roxstrom-Lindquist and Faye, 2001)

Biological Process (3 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

involved_in adult chitin-containing cuticle pigmentation

inferred from mutant phenotype

(Dean et al., 2022)

involved_in chaeta morphogenesis

inferred from mutant phenotype

(Dean et al., 2022)

involved_in imaginal disc-derived wing morphogenesis

inferred from mutant phenotype

(Dean et al., 2022)

Terms Based on Predictions or Assertions (0 terms)

Cellular Component (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

part_of ubiquitin ligase complex

inferred from biological aspect of ancestor with PANTHER:PTN002302768

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

Protein Family (UniProt)

Belongs to the yippee family. (Q9XZF0)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

Phenotypic Description (Red Book; Lindsley and Zimm 1992)

s: sable

Body color dark with prominent trident. Classification good at 19, overlaps wild type increasingly with higher temperature. ERG normal (Hotta and Benzer, 1969, Nature 222: 354-56). Viability sometimes reduced. s is nonautonomous in gynandromorphs containing both s and + tissue (Lewis, 1955, DIS 29: 134). Tyrosinase formed in adult (Horowitz and Fling). β-alanine pools only 39% normal (Wright, 1987, Adv. Genet. 24: 127-222). s/s2 easily classified. Females hemizygous for s very dark and sterile (Craymer and Roy, 1980, DIS 55: 200-04). Suppressed by su(s). RK1 at 19.

Body color less dark than s and trident more prominent. Expression best at 19, overlaps wild type at 25 and 30. Viability excellent. RK1 at 19.

seb: sable-ebonized

Fly heavily pigmented with trident pattern and scutellum very dark. Wings slightly shortened; membrane often slightly concave; wing tips occasionally truncate. Males viable and fertile; females sterile. RK2.

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\Ype for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q9XZF0)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.51

Low-frequency RNA-Seq exon junction(s) not annotated.

Annotated transcripts do not represent all supported alternative splices within 5' UTR.

Gene model reviewed during 5.55

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Ype-RA

FBtr0073789

NM_132654

1136

121

Ype-RB

FBtr0100168

NM_001038752

1293

110

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

Ype-PA

FBpp0073620

13.7

121

8.96

FBpp0099522

12.7

110

10.24

Q8MSV1

NP_001033841

ABC67182

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Subunit Structure (UniProtKB)

Interacts with hemolin.

(UniProt, Q9XZF0)

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Ype using the Feature Mapper tool.

External Data

Crossreferences

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-1.60

Transcript Expression

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

larval stage -- adult stage

organism

(Roxstrom-Lindquist and Faye, 2001)

adult stage | male

organism

(Roxstrom-Lindquist and Faye, 2001)

adult stage | female

organism

(Roxstrom-Lindquist and Faye, 2001)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Ype in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Ype

View exonic expression by tissue for Dmel\Ype

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

32295/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0288857

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0288857

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 6 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 5 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Ype

Transgenic constructs containing regulatory region of Ype

Aberrations (Deficiencies and Duplications) ( 21 )

Inferred from experimentation ( 21 )

Gene disrupted in

Df(1)C246

(Deak et al., 1982, Craymer and Roy, 1980)

Df(1)Exel6245

(Dean et al., 2022, Ryder, 2004.4.26)

Gene not disrupted in

Df(1)AR2

(Muralidhar and Thomas, 1993)

Df(1)AR10

(Muralidhar and Thomas, 1993)

Df(1)BSC713

(Dean et al., 2022)

Df(1)ED7165

(Dean et al., 2022)

Df(1)ED7170

(Dean et al., 2022)

Df(1)ED7217

(Dean et al., 2022)

Df(1)HA92

(Craymer and Roy, 1980)

Df(1)N12

(Craymer and Roy, 1980)

Gene not duplicated in

Dp(1;3)DC263

(Dean et al., 2022)

Dp(1;3)DC264

(Dean et al., 2022)

Dp(1;3)DC265

(Dean et al., 2022)

Dp(1;3)DC266

(Dean et al., 2022)

Dp(1;3)DC267

(Dean et al., 2022)

Dp(1;3)DC270

(Dean et al., 2022)

Dp(1;3)DC272

(Dean et al., 2022)

Dp(1;3)v⁺74c

(Schalet, 1986)

Dp(1;4)r⁺l

(Schalet, 1986)

Gene duplicated in

Dp(1;3)DC268

(Dean et al., 2022)

Dp(1;3)DC269

(Dean et al., 2022)

Inferred from location ( 8 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal | female | recessive

Ype^Chi-A

lethal - all die before end of P-stage | male

Ype^Δ1

lethal - all die before end of pupal stage | female | recessive

Ype^Δ1

partially lethal, with Scer\GAL4^Act5C.PI

Ype^GD17271

partially lethal | male

Ype^Chi-A

viable

Ype^eb

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

viable, with Scer\GAL4^Mef2.PR

viable, with Scer\GAL4^pnr-MD237

viable, with Scer\GAL4^tin.CΔ4

viable | male

Ype^eb

Sterility

Allele

female sterile

Ype^eb

female sterile | recessive

Ype^eb

male fertile

Ype^eb

Other Phenotypes

Allele

abnormal body color

abnormal body color, with Scer\GAL4^pnr-MD237

abnormal body color | adult stage, with Scer\GAL4^Act5C.PI

Ype^GD17271

abnormal body color | adult stage, with Scer\GAL4^pnr-MD237

abnormal body color | adult stage | dominant | female

Ype^Chi-A

abnormal body color | adult stage | female

Ype^s-1

abnormal body color | adult stage | female (with Df(1)Exel6245)

Ype^s-1

abnormal body color | adult stage | female (with Ype^Chi-A)

Ype^s-1

abnormal body color | adult stage | female (with Ype^s-1)

Ype^Chi-A

abnormal body color | adult stage | male

Ype^Chi-A

abnormal body color | male | pharate adult stage

Ype^Chi-A

abnormal developmental rate, with Scer\GAL4^Act5C.PI

Ype^GD17271

abnormal developmental rate, with Scer\GAL4^r4

Ype^GD17271

abnormal eclosion, with Scer\GAL4^Act5C.PI

Ype^GD17271

abnormal eclosion | male

Ype^Chi-A

visible

Ype^eb

visible, with Scer\GAL4^pnr-MD237

Ype^GD8633

visible | adult stage

Ype^Chi-A

visible | adult stage, with Scer\GAL4^Act5C.PI

Ype^GD17271

visible | recessive

Phenotype manifest in

Allele

mesonotum, with Scer\GAL4^pnr-MD237

ocellar bristle | decreased number, with Scer\GAL4^pnr-MD237

Ype^GD17271

ocellar bristle | decreased number | female (with Df(1)Exel6245)

Ype^s-1

postocellar bristle | decreased number, with Scer\GAL4^pnr-MD237

Ype^GD17271

postocellar bristle | decreased number (with Df(1)Exel6245)

Ype^s-1

scutellar bristle | female | increased number

Ype^s-1

scutellar bristle | female | increased number (with Ype^Chi-A)

Ype^s-1

scutellar bristle | female | increased number (with Ype^s-1)

scutellar bristle | female | increased number (with Ype^Δ1)

Ype^s-1

scutellar bristle | increased number, with Scer\GAL4^Act5C.PI

Ype^GD17271

scutellar bristle | increased number, with Scer\GAL4^pnr-MD237

Ype^GD17271

scutellar bristle | increased number | male

scutellar bristle | increased number | male | pharate adult stage

Ype^Δ1

scutellum

Ype^eb

scutellum, with Scer\GAL4^pnr-MD237

scutum

Ype^s-1

scutum, with Scer\GAL4^pnr-MD237

trichogen cell, with Scer\GAL4^pnr-MD237

Ype^GD8633

trident

Ype^eb

wing

wing, with Scer\GAL4^Act5C.PI

Ype^GD17271

wing, with Scer\GAL4^nub-AC-62

Ype^GD17271

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (5)

Hsap\YPEL5

14 of 14

Yes

6 of 14

6 of 14

6 of 14

5 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (4)

Rnor\Ypel5

14 of 14

Yes

Rnor\Ypel1

6 of 14

Rnor\Ypel3

6 of 14

Rnor\Ypel4

5 of 14

Mus musculus (laboratory mouse) (5)

Mmus\Ypel5

14 of 14

Yes

6 of 14

6 of 14

6 of 14

5 of 14

Xenopus tropicalis (Western clawed frog) (4)

Xtro\ypel1

2 of 13

Yes

Xtro\ypel2

2 of 13

Yes

Xtro\ypel5

2 of 13

Yes

Xtro\cdk18

1 of 13

Yes

Danio rerio (Zebrafish) (6)

Drer\ypel5

13 of 14

Yes

6 of 14

6 of 14

6 of 14

5 of 14

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (3)

Cele\B0546.4

9 of 14

Yes

Cele\B0546.3

8 of 14

Yes

Cele\F37A8.5

6 of 14

Anopheles gambiae (African malaria mosquito) (2)

Agam\AgaP_AGAP000780

12 of 12

Yes

Agam\AgaP_AGAP011563

5 of 12

Arabidopsis thaliana (thale-cress) (8)

Atha\AT2G40110

7 of 13

Yes

Atha\AT4G27745

7 of 13

Yes

6 of 13

6 of 13

6 of 13

6 of 13

Yes

Atha\AT5G53940

6 of 13

Atha\AT1G03620

1 of 13

Saccharomyces cerevisiae (Brewer's yeast) (1)

Scer\MOH1

5 of 13

Yes

Schizosaccharomyces pombe (Fission yeast) (1)

Spom\SPAPJ691.02

8 of 12

Yes

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:Ype. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (6)

10 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

14 of 14

6 of 14

6 of 14

6 of 14

5 of 14

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Show neighbor-neighbor interactions:

Off

Show/hide secondary interactors
(data from AllianceMine provided by esyN)

Select Layout:

Force Directed

Circle

Concentric

Legend:

Protein

RNA

Selected Interactor(s)

Other Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

Ype - CG7054

bimolecular fluorescence complementation, fluorescence microscopy

(Känel et al., 2022)

Ype - CG7611

experimental knowledge based

(Guruharsha et al., 2011)

Ype - Hexim

experimental knowledge based

(Guruharsha et al., 2011)

Ype - Hou

experimental knowledge based

(Guruharsha et al., 2011)

Ype - Larp7

experimental knowledge based

(Guruharsha et al., 2011)

Ype - cDIP

experimental knowledge based

(Guruharsha et al., 2011)

Summary of Genetic Interactions

esyN Network Diagram

Show/hide secondary interactors
(data from AllianceMine provided by esyN)

esyN Network Key:

Suppression

Enhancement

Other Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Ype

suppressible

su(sable)

(Voelker et al., 1989)

Ype

suppressible

svr

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Subunit Structure (UniProtKB)

Interacts with hemolin.

(UniProt, Q9XZF0 )

Linkouts

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Neutrophil degranulation

Class of Gene

gene

nuclear_gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

1-43

Cytogenetic map

11F1-11F1

Sequence location

X:13,385,914..13,387,417 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

11F1-11F1

Left limit from non-inclusion within Df(1)N12 (FBrf0034402) Right limit from inclusion within Df(1)C246 (FBrf0034402); Limits computationally determined from genome sequence between P{EP}CG1640^EP1626 and P{EP}NFAT^EP1353&P{EP}NFAT^EP1508

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

12A-12A

(Roxstroem-Lindquist, 1999.3.26)

Experimentally Determined Recombination Data

Location

1-43

(FlyBase, 2016)

1-42.4

(Comeron et al., 2012)

1-42.0 +/- 1.2

(Fahmy and Fahmy, 1959)

1-43.0

Left of (cM)

(Deak et al., 1982)

Right of (cM)

Notes

Stocks and Reagents

Stocks (13)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

4173

Ype^s-1

93859

w^* TI{TI}Ype^Δ1/FM7c

93858

w^* TI{TI}Ype^Chi-A/FM7h

54020

y¹ v¹; P{TRiP.HMJ21446}attP40

ec¹ ct⁶ Ype^s-1 car¹/FM6

4621

y¹ w¹ ec¹ Ype^s-1 f¹/C(1)A, y¹

Kyoto

101175

Ype^s-1

105690

ec¹ ct⁶ Ype^s-1 car¹/FM6

107825

y¹ w¹ ec¹ Ype^s-1 f¹/C(1)A, y¹

NIG-Fly

HMJ21446

y¹ v¹; P{TRiP.HMJ21446}attP40/CyO

VDRC

v108836

P{KK100302}VIE-260B

v46977

w¹¹¹⁸; P{GD17271}v46977

More stocks available...

Genomic Clones (9)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (8)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

IP15767

RNAi and Array Information

Linkouts

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

Relationship to Other Genes

Source for database merge of

Source for merge of: Ype sable

(Dean et al., 2022)

Additional comments

Nomenclature History

Source for database identify of

Source for identity of: Yippee CG1989

(Zheng, 1999.11)

Source for identity of: Ype Yippee

(FlyBase, 2009-)

Source for identity of: sable s

(FlyBase, 2009-)

Nomenclature comments

Assigned the short symbol 'Ype' to the 'Yippee' gene, consistent with the nomenclature used for its paralog (Ypel) and its vertebrate orthologs (YPEL1-5).

(FlyBase, 2009-)

The gene symbol "s" has been changed to "sable" in order to reduce confusion with the "S" ("Star") gene symbol, from which it differed only by case.

(FlyBase, 2009-)

Etymology

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

CG1989

(Ni et al., 2010.12.1, Keleman et al., 2009.8.5)

YIPPEE

(Känel et al., 2022)

Yippee

(Meltzer et al., 2019, Bischof and FlyORF project members, 2014.6.20, Kong et al., 2010, Roxstrom-Lindquist and Faye, 2001)

Ype

(Fahmy and Fahmy, 1959)

(Wright, 1987, Lewis, 1960)

sable

Name Synonyms

Yippee

(Lee et al., 2024, Dean et al., 2022, Huang et al., 2022, Kim et al., 2020)

ebonised

(Fahmy and Fahmy, 1959)

ebonized

sable

(Dean et al., 2022, Wright, 1987, Lewis, 1960)

Secondary FlyBase IDs

FBgn0026749
FBgn0003309

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 31 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

32295

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q9XZF0

UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information

Q9XZF0

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Q8MSV1

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q9XZF0

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

32295/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0288857

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0288857

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG1989

MARRVEL_MODEL - MARRVEL (model organism gene)

32295

Linkouts

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0288857

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC007498

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Neutrophil degranulation

References (57)

The following external sites may use different assemblies or annotations than FlyBase.

-1.60

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