FB2025_01 , released February 20, 2025
Human Disease Model Report: peroxisome biogenesis disorder 8A
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General Information
Name
peroxisome biogenesis disorder 8A
FlyBase ID
FBhh0000052
Overview

This report describes peroxisome biogenesis disorder 8A (PBD8A), which is a subtype of peroxisome biogenesis disorder. The human gene implicated in this disease is PEX16, which encodes a protein that is essential for the assembly of functional peroxisomes. There is a single high-scoring fly ortholog, Pex16, for which RNAi targeting constructs and alleles caused by insertional mutagenesis have been generated.

For loss-of-function mutations in the Dmel\Pex16 gene, observed phenotypes include aspects similar to the human disease, including reduced body size, reduced lifespan, the elevation of very long chain fatty acid ((VLCFA) levels, structural defects in the nervous system, and a failure to assemble functional peroxisomes.

[updated Oct. 2015 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: peroxisome biogenesis disorder
Symptoms and phenotype

Newborns affected with Zellweger syndrome (ZS) are hypotonic, feed poorly, and have distinctive facies, seizures, and liver cysts with hepatic dysfunction. Bony stippling of the patella(e) and other long bones may occur. The neurological defects include demyelination, retinal dystrophy, hearing loss and seizures. Infants with ZS are significantly impaired and typically die during the first year of life, usually having made no developmental progress. Older children have retinal dystrophy, sensorineural hearing loss, developmental delay with hypotonia, and liver dysfunction. The clinical courses of the milder forms of peroxisome biogenesis disorder, neonatal adrenoleukodystrophy (NALD) and infantile Refsum disease (IRD), are variable and may include developmental delays, hearing loss, vision impairment, liver dysfunction, episodes of hemorrhage, and intracranial bleeding. While some children can be very hypotonic, others learn to walk and talk. The condition is often slowly progressive [from GeneReviews, Peroxisome Biogenesis Disorders, Zellweger Syndrome Spectrum, 2015.09.09].

PBD syndrome is characterized clinically by severe neurologic dysfunction, craniofacial abnormalities, and liver dysfunction. There are 4 main phenotypic classes of PBDs that were defined prior to the molecular characterization; three of them in order of severity, Zellweger syndrome, neonatal adrenoleukodystrophy (NALD), and infantile Refsum disease (IRD), form a spectrum of overlapping features. The most severely affected patients with classic Zellweger syndrome die within the first year. Zellweger syndrome is indicated by the "A" in the OMIM subtype designation; the less severe forms are indicated with a "B" in the OMIM subtype designation (BSC). The fourth class, rhizomelic chondrodysplasia punctata (RCDP1), displays a distinct PBD phenotype. [from MIM:214100; 15.08.10]

Specific Disease Summary: peroxisome biogenesis disorder 8A
OMIM report

[PEROXISOME BIOGENESIS DISORDER 8A (ZELLWEGER); PBD8A](https://omim.org/entry/614876)

Human gene(s) implicated

[PEROXISOME BIOGENESIS FACTOR 16; PEX16](https://omim.org/entry/603360)

Symptoms and phenotype

PBD8A is one of a group of peroxisome biogenesis disorders that presents in infants with severe seizures, profound hypotonia, and inability to feed; additional characteristics are craniofacial and eye abnormalities, neuronal migration defects, enlarged liver, small size, and bone abnormalities. Affected individuals do not show significant development and usually die in the first year. [from MIM:614876; 15.08.10]

Genetics

PBD8A is autosomal recessive and is caused by mutations in the Hsap\PEX16 gene. [from MIM:614876; 15.08.10]

Cellular phenotype and pathology

Peroxisomal membrane formation is completely absent in cell lines from individuals with mutations in HSap\PEX16 (peroxisome biogenesis disorder 8A). [from Gene_reviews: Peroxisome Biogenesis Disorders, Zellweger Syndrome Spectrum, 2015.08.10]

Molecular information

The PEX16 encodes an integral peroxisomal membrane protein which is essential for peroxisomal membrane protein targeting. Expression of PEX16 protein morphologically and biochemically restores the formation of new peroxisomes, suggesting a role in peroxisome organization and biogenesis. [from Gene_cards:PEX16, 2015.09.09]

PBD8A is is one of a group of peroxisome biogenesis disorders resulting from disordered peroxisome biogenesis. [from MIM:614876; 15.08.10]

External links
Disease synonyms
Zellweger syndrome
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one: 1 human to 1 Drosophila.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      Peroxin 16 (Pex16) encodes a protein involved in peroxisome organization, spermatocyte division, and fatty acid catabolism. [Date last reviewed: 2019-08-01]
      Molecular function (GO)
        Cellular component (GO)
        Gene Groups / Pathways
        Comments on ortholog(s)

        Ortholog of human gene PEX16 (1 Drosophila to 1 human). Dmel\Pex16 shares 33% identity and 54% similarity with human PEX16.

        Orthologs and Alignments from DRSC
        DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
        Other Genes Used: Viral, Bacterial, Synthetic (0)
          Summary of Physical Interactions (0 groups)
          Alleles Reported to Model Human Disease (Disease Ontology) (3 alleles)
          Models Based on Experimental Evidence ( 3 )
          Modifiers Based on Experimental Evidence ( 0 )
          Allele
          Disease
          Interaction
          References
          Alleles Representing Disease-Implicated Variants
          Genetic Tools, Stocks and Reagents
          Sources of Stocks
          Contact lab of origin for a reagent not available from a public stock center.
          Bloomington Stock Center Disease Page
          Related mammalian, viral, bacterial, or synthetic transgenes
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila transgenes
          Allele
          Transgene
          Publicly Available Stocks
          RNAi constructs available
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila classical alleles
          Allele
          Allele class
          Mutagen
          Publicly Available Stocks
          amorphic allele - genetic evidence
          P-element activity
          References (8)