FB2025_01 , released February 20, 2025
Human Disease Model Report: atrial septal defect 4
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General Information
Name
atrial septal defect 4
FlyBase ID
FBhh0000102
Disease Ontology Term
Parent Disease
Overview

This report describes atrial septal defect 4 (ASD4), which is a sub-type of atrial septal defect (ASD); ASD exhibits autosomal dominant inheritance. The human gene implicated in this disease is TBX20, which encodes a T-box transcription factor. There are 2 high-scoring fly orthologs, H15 and mid, for which classical amorphic and loss-of-function alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated. The two Drosophila orthologs map within 60kb of each other. They exhibit different expression patterns: H15 is more specifically expressed in cardiac tissues, especially in adults; mid is more broadly expressed, including in early embryos.

The human TBX20 gene has not been introduced into flies.

Most animals homozygous for amorphic mutations of Dmel\mid die during late embryogenesis; among other embryonic phenotypes, a partially penetrant heart phenotype is observed. Mutations of Dmel\H15 have not been well characterized. The penetrance of heart morphogenesis defects in embryos observed for RNAi-induced knockdown of mid is increased in an H15 mutant background.

[updated Apr. 2017 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: atrial septal defect
Symptoms and phenotype

Congenital heart defect characterized by defects of atrial septation; additional heart abnormalities, such as other defects in septation, defects in chamber growth, or insufficiency of the cardiac valves may be present. [from MIM:611363; 2015.12.18]

Atrial septal defect is characterized by a defect in the interatrial septum allowing pulmonary venous return from the left atrium to pass directly to the right atrium. Depending on the size of the defect, this can result in a spectrum of disease; diagnosis may not occur until adulthood. [from Medscape, http://emedicine.medscape.com/article/162914-overview, 2015.12.18]

Specific Disease Summary: atrial septal defect 4
OMIM report

[ATRIAL SEPTAL DEFECT 4; ASD4](https://omim.org/entry/611363)

Human gene(s) implicated

[T-BOX TRANSCRIPTION FACTOR 20; TBX20](https://omim.org/entry/606061)

Symptoms and phenotype

Atrial septal defect with other congenital heart disease but no conduction defects or noncardiac abnormalities. [from MIM:611363; 2015.12.18]

Genetics

ASD4 is inherited as an autosomal dominant; it is associated with mutations in the TBX20 gene. [from MIM:611363; 2015.12.18]

Cellular phenotype and pathology
Molecular information

TBX20 is a member of the T-box family of transcription factors; it has been shown to interact with known cardiac transcription factors. Both long and short isoforms of the Tbx20 protein are produced, differing in the presence or absence of a C-terminal domain (beyond the T-box). [from MIM:606061; 2015.12.18]

External links
Disease synonyms
ASD4
atrial septal defect
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to many: 1 human to 2 Drosophila.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (2)
      Gene Snapshot
      H15 (H15) encodes a T-box transcription factor that regulates the specification of cell fate in the heart and central nervous system. [Date last reviewed: 2019-07-11]
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      Ortholog of human TBX20 (2 Drosphila to 1 human). Dmel\H15 shares 35% identity and 47% similarity with the human gene. The 2 fly genes differ in expression patterns: H15 is highly expressed in the heart of the adult fly; low levels of expression are observed in late embryos, primarily in the embryonic dorsal vessel.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      Ortholog of human TBX20 (2 Drosphila to 1 human). Dmel\mid shares 40% identity and 54% similarity with the human gene. The 2 fly genes differ in expression patterns: mid is expressed in a variety of tissues, including epidermal and neural; among other embryonic structures, expression is observed in the embryonic dorsal vessel.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (18 groups)
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        protein-protein
        Interacting group
        Assay
        References
        bimolecular fluorescence complementation, fluorescence microscopy
        bimolecular fluorescence complementation, fluorescence microscopy
        bimolecular fluorescence complementation, fluorescence microscopy
        bimolecular fluorescence complementation, fluorescence microscopy
        anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, pull down, autoradiography
        pull down, autoradiography
        bimolecular fluorescence complementation, fluorescence microscopy
        Alleles Reported to Model Human Disease (Disease Ontology) (2 alleles)
        Models Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Interaction
        References
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        loss of function allele
        Delta2-3 transposase
        loss of function allele
        Delta2-3 transposase
        amorphic allele - molecular evidence
        amorphic allele - genetic evidence
        ethyl methanesulfonate
        loss of function allele
        ethyl methanesulfonate
        amorphic allele - genetic evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        amorphic allele - genetic evidence
        ethyl methanesulfonate
        References (5)