FB2025_01 , released February 20, 2025
Human Disease Model Report: Pitt-Hopkins-like syndrome 2
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General Information
Name
Pitt-Hopkins-like syndrome 2
FlyBase ID
FBhh0000979
Disease Ontology Term
Parent Disease
Overview

This report describes Pitt-Hopkins-like syndrome 2 (PTHSL2); PTHSL2 exhibits autosomal recessive inheritance. The human gene implicated in this disease, NRXN1, encodes a single-pass membrane protein that belongs to the neurexin family; the neurexin/neuroligin complex is present at neural synapses and is required for efficient neurotransmission and in the formation of synaptic contacts. There is a single orthologous gene in Drosophila, Dmel\Nrx-1, for which classical amorphic alleles, RNAi targeting constructs, and alleles caused by insertional mutagenesis have been generated. Dmel\Nrx-1 is also orthologous to second gene in human, NRXN3. NRXN1 has also been implicated in a deletion syndrome associated with susceptibility to schizophrenia (MIM:614332) and as an autism susceptibility locus (FBhh0000516).

A UAS construct of the wild-type human Hsap\NRXN1 gene has been introduced into flies, but has not been characterized.

Animals homozygous for amorphic mutations of Dmel\Nrx-1 typically die before reaching adult stage. Larvae exhibit locomotor, neurophysiology, and neuroanatomy defects, including decreased number of synaptic boutons in NMJs; overexpression results in increased bouton number. Genetic and physical interactions for Dmel\Nrx-1 have been described; see below and in the Nrx-1 gene report.

[updated Apr. 2020 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: Pitt-Hopkins-like syndrome 2
OMIM report

[PITT-HOPKINS-LIKE SYNDROME 2; PTHSL2](https://omim.org/entry/614325)

Human gene(s) implicated

[NEUREXIN I; NRXN1](https://omim.org/entry/600565)

Symptoms and phenotype

Pitt-Hopkins syndrome is characterized by mental retardation, wide mouth and distinctive facial features, and intermittent hyperventilation followed by apnea (Zweier et al., 2007; pubmed:17436255). [from MIM:610954; 2019.02.27]

A severe mental retardation syndrome resembling Pitt-Hopkins syndrome; autistic behaviors and recurrent seizures may also be present. [from MIM:614325; 2019.02.27]

Genetics

Pitt-Hopkins-like syndrome-2 (PTHSL2) is caused by compound heterozygous mutation in the NRXN1 gene. [from MIM:614325; 2019.02.27]

Deletions at 2p16.3 involving exons of NRXN1 are associated with susceptibility to autism, schizophrenia (SCZD17), developmental delay, intellectual disability, and dysmorphic features. The phenotype is highly variable and shows incomplete penetrance (summary by Dabell et al., 2013; pubmed:23495017). [from MIM:614325; 2019.02.27]

Cellular phenotype and pathology
Molecular information

The NRXN1 gene encodes a single-pass type I membrane protein that belongs to the neurexin family. [Gene Cards, NRXN1; 2017.03.18]

Neurexins are presynaptic proteins that help to connect neurons at the synapse. They are located mostly on the presynaptic membrane and contain a single transmembrane domain. The extracellular domain interacts with proteins in the synaptic cleft, most notably neuroligin, while the intracellular cytoplasmic portion interacts with proteins associated with exocytosis. Neurexin and neuroligin "shake hands," resulting in the connection between the two neurons and the production of a synapse. Neurexins mediate signaling across the synapse, and influence the properties of neural networks by synapse specificity. (HGNC Gene group, Neurexins, https://www.genenames.org/data/genegroup/#!/group/1582)

Neurexins, including NRXN1, are cell-surface receptors that bind neuroligins to form a Ca(2+)-dependent neurexin/neuroligin complex at synapses in the central nervous system. This transsynaptic complex is required for efficient neurotransmission and is involved in the formation of synaptic contacts (Reissner et al., 2008; pubmed:18812509). [from MIM:600565; 2019.02.27]

External links
Disease synonyms
intellectual disability, syndromic, Pitt-Hopkins-like
PTHSL2
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
Symbol / Name
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: 3 human to 1 Drosophila. The other human genes are NRXN2 and NRXN3.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    Neurexin 1 (Nrx-1) encodes a transmembrane synaptic adhesive molecule that regulates the synaptic architecture and function in the brain and neuromuscular junction. It contributes to synaptic growth, transmission, synaptic formation and also regulation of learning and memory, locomotion and visual function. [Date last reviewed: 2019-03-14]
    Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human NRXN1, NRXN2 and NRXN3 (1 Drosophila to 3 human). Dmel\Nrx-1 shares 32-33% identity and 47-49% similarity with the human genes.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (14 groups)
        RNA-protein
        Interacting group
        Assay
        References
        anti bait coimmunoprecipitation, quantitative reverse transcription pcr
        protein-protein
        Interacting group
        Assay
        References
        anti bait coimmunoprecipitation, western blot, two hybrid, pull down
        two hybrid, pull down, western blot, anti bait coimmunoprecipitation
        anti bait coimmunoprecipitation, western blot, pull down, two hybrid
        anti tag coimmunoprecipitation, anti tag western blot
        two hybrid, pull down, molecular weight estimation by staining, anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        two hybrid, isothermal titration calorimetry, predetermined participant, anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, western blot, pull down
        x-ray crystallography, pull down, molecular weight estimation by staining, two hybrid, anti bait coimmunoprecipitation, western blot, isothermal titration calorimetry, predetermined participant
        anti tag coimmunoprecipitation, anti tag western blot
        Alleles Reported to Model Human Disease (Disease Ontology) (11 alleles)
        Models Based on Experimental Evidence ( 5 )
        Modifiers Based on Experimental Evidence ( 4 )
        Models Based on Experimental Evidence ( 4 )
        Modifiers Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Interaction
        References
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        P-element activity
        amorphic allele - molecular evidence
        P-element activity
        Delta2-3 transposase
        Delta2-3 transposase
        References (8)