FB2025_01 , released February 20, 2025
Human Disease Model Report: retinal degeneration, excessive endocytosis of rhodopsin
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General Information
Name
retinal degeneration, excessive endocytosis of rhodopsin
FlyBase ID
FBhh0000999
Disease Ontology Term
Parent Disease
OMIM
Overview

Work in Drosophila and analyses of specific mutations in human rhodopsin support a connection between high levels of light-dependent rhodopsin endocytosis and retinal degeneration. In Drosophila photoreceptors, endocytosis of a large amount of rhodopsin at a rapid rate results in cell death.

Initial work in Drosophila was done with mutations in the norpA gene, which encodes an eye-specific phospholipase C that is essential for the photoresponse. Loss-of-function mutations of norpA exhibit very high levels of rhodopsin endocytosis under light stimulation, light-dependent photoreceptor cell death, and retinal degeneration.

Data are consistent with a model that photoreceptor cell death is induced by excessive light-dependent endocytosis of rhodopsin and its subsequent accumulation in the late endosomes. Mutations in Drosophila genes impacting endocytosis and lysosomal degradation, including cm and lt, have been used to investigate this process. Loss-of-function mutations in these genes also result in high levels of rhodopsin endocytosis, light-dependent photoreceptor cell death, and retinal degeneration.

Impaired autophagy may contribute to endosomal rhodopsin accumulation. Light-dependent retinal degeneration is observed in the knockdown or mutation of autophagy-essential components such as Atg7, Atg8a, Pisd and bbc. It is postulated that activated rhodopsin is degraded by autophagy in collaboration with endosomal pathways.

It has been shown that the retromer complex is expressed in fly photoreceptors and that it is required for recycling endocytosed rhodopsin upon light stimulation. Assessed in somatic clones in the eye, loss of either retromer subunit Vps35 or Vps26 causes rhodopsin mislocalization in the photoreceptors and severe light-induced photoreceptor degeneration. The human orthologs of Dmel\Vps26, Hsap\VPS26A and Hsap\VPS26B, have been introduced into flies. Ubiquitous expression of either wild-type human gene results in heterologous rescue (functional complementation) of the lethal phenotype of a Dmel\Vps26 loss-of-function mutation; the light-dependent retinal degeneration phenotype is also rescued.

Some mutations that result in impaired mitochondrial energy production appear to causes light-induced photoreceptor degeneration that is independent of oxidative stress; mutations in the Drosophila genes Lrpprc2 (see FBhh0000353) and Pdha fall into this category. It is postulated that the observed photoreceptor degeneration is the result of excessive endocytosis of rhodopsin during light exposure.

Although features of the observed photoreceptor cell death resemble those of developmental apoptosis, evidence in flies supports involvement of a different cell-death pathway.

See also the human disease model reports 'retinal disease, rhodopsin-related' (FBhh0000219) and 'mitochondrial complex IV deficiency, nuclear type 5' (FBhh0000353). One of the retromer components, VPS35, is implicated in a form of Parkinson disease (see FBhh0000030).

[updated Apr. 2021 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: retinal degeneration, excessive endocytosis of rhodopsin
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics
Cellular phenotype and pathology
Molecular information
External links
    Disease synonyms
    Ortholog Information
    Human gene(s) in FlyBase
    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (6)
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human PLCB4; Dmel\norpA shares 50% identity and 66% similarity with the human gene. Other human PLCB genes (PLCB1, 2, and 3) are more closely related to Dmel\Plc21C.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Molecular function (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human AP3M1 and AP3M2. Dmel\cm shares 69-70% identity and 85% similarity with the human genes.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      light (lt) encodes a cellular-protein trafficking protein that forms part of the homotypic fusion and vacuolar protein sorting (HOPS) and class C core vacuole/endosome tethering (CORVET) complexes. It is required for fusion of autophagosomes with lysosomes, endocytic down-regulation of Notch signaling, and eye pigment biogenesis. [Date last reviewed: 2019-03-14]
      Molecular function (GO)
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human VPS41. Dmel\lt shares 38% identity and 58% similarity with the human gene.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      Vacuolar protein sorting 35 (Vps35) encodes a component of the retromer complex that acts to recycle membrane proteins to the Golgi or plasma membrane from endocytosed vesicles. [Date last reviewed: 2018-10-18]
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human VPS35 (1 Drosophila to 1 human). Dmel\Vps35 shares 61% identity and 78% similarity with the human gene.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human VPS26A and VPS26B (1 Drosophila to 2 human). Dmel\Vps26 shares 65-69% identity and 75-81% similarity with the human genes.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human PDHA1 and PDHA2 (1 Drosophila to 2 human). Dmel\Pdha shares 53-56% identity and 68-72% similarity with the human genes.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (29 groups)
        protein-protein
        Interacting group
        Assay
        References
        isothermal titration calorimetry, predetermined participant, anti bait coimmunoprecipitation, western blot, nuclear magnetic resonance, fluorescence polarization spectroscopy, pull down, x-ray crystallography, far western blotting, molecular sieving, comigration in sds page, molecular weight estimation by staining, enzyme linked immunosorbent assay, autoradiography, anti tag coimmunoprecipitation, anti tag western blot
        anti bait coimmunoprecipitation, molecular weight estimation by staining, western blot, pull down, Identification by mass spectrometry
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot, Identification by mass spectrometry
        anti tag coimmunoprecipitation, western blot
        pull down, peptide massfingerprinting
        anti tag coimmunoprecipitation, western blot
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, anti tag western blot
        proximity ligation assay, fluorescence microscopy
        pull down, peptide massfingerprinting
        pull down, anti tag western blot, anti tag coimmunoprecipitation
        pull down, anti tag western blot
        proximity ligation assay, fluorescence microscopy
        pull down, anti tag western blot, anti tag coimmunoprecipitation
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, western blot, experimental knowledge based
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, anti tag western blot
        pull down, peptide massfingerprinting
        pull down, peptide massfingerprinting
        experimental knowledge based
        anti tag coimmunoprecipitation, western blot, experimental knowledge based
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, Identification by mass spectrometry
        anti tag coimmunoprecipitation, peptide massfingerprinting
        experimental knowledge based
        Alleles Reported to Model Human Disease (Disease Ontology) (25 alleles)
        Models Based on Experimental Evidence ( 3 )
        Modifiers Based on Experimental Evidence ( 4 )
        Models Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 6 )
        Modifiers Based on Experimental Evidence ( 11 )
        Allele
        Disease
        Interaction
        References
        model of  brain cancer
        is ameliorated by DeltaDN.UAS
        is ameliorated by DeltaDN.UAS
        is ameliorated by DeltaHMS01309
        is ameliorated by HrsUAS.cLa
        is ameliorated by NGD14477
        is ameliorated by Rab5S43N.UAS
        is ameliorated by Rab7Q67L.UAS
        is ameliorated by Su(dx)UAS.cCa
        is ameliorated by kuzDN.UAS
        Models Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 3 )
        Models Based on Experimental Evidence ( 2 )
        Modifiers Based on Experimental Evidence ( 3 )
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        P-element activity
        amorphic allele - genetic evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        amorphic allele - molecular evidence
        ethyl methanesulfonate
        References (16)