FB2025_01 , released February 20, 2025
Human Disease Model Report: obesity, susceptibility to (postulated), SEC16B-related
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General Information
Name
obesity, susceptibility to (postulated), SEC16B-related
FlyBase ID
FBhh0001500
Disease Ontology Term
Parent Disease
OMIM
Overview

The human gene SEC16B has been associated with obesity, diabetes, and metabolic syndrome in multiple GWAS and other studies. SEC16B encodes a conserved peripheral membrane protein localized to endoplasmic reticulum (ER) exit sites (ERES). There is a single orthologous gene in Drosophila, Sec16, for which a number of genetic reagents have been generated, including RNAi-targeting constructs. Dmel\Sec16 is also ortholgous to the human gene SEC16A.

The human SEC16B gene has not been introduced into flies.

Using RNAi reagents, it has been shown that global reduction of Dmel\Sec16 results in increased food intake and triglyceride levels. Sec16 acting in the nervous system, primarily in insulin-like peptide producing cells (IPCs), controls fat accumulation.

[updated Feb. 2023 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: obesity, susceptibility to (fly models overview)
Symptoms and phenotype

Obesity is an abnormal accumulation of body fat, usually 20% or more over an individual's ideal body weight. Obesity is associated with increased risk of illness, disability, and death. (http://medical-dictionary.thefreedictionary.com/obesity).

The development of obesity is recognized as having both genetic and environmental components (https://www.sciencelearn.org.nz/resources/203-obesity-genetic-or-environmental).

Specific Disease Summary: obesity, susceptibility to (postulated), SEC16B-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics

SEC16B has been strongly associated with obesity in multiple GWAS and other studies using different populations; it has also been associated with diabetes and metabolic syndrome (FBrf0255552 and references cited therein).

Cellular phenotype and pathology
Molecular information

The protein encoded by SEC16B plays a role in the organization of the endoplasmic reticulum exit sites (ERES); it is required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus and is involved in peroxisome biogenesis. [Gene Cards, SEC16B; 2023.02.25]

External links
Disease synonyms
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    Many to one: 2 human genes to 1 Drosophila gene.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      Secretory 16 (Sec16) encodes a protein involved in the organization of endoplasmic reticulum exit sites. It contributes to stress response to amino-acid starvation, during which it mediates the formation of both Sec bodies and stress granules. [Date last reviewed: 2018-11-15]
      Gene Groups / Pathways
        Comments on ortholog(s)

        Moderate-scoring ortholog of human SEC16A and SEC16B (1 Drosophila gene to 2 human genes).

        Orthologs and Alignments from DRSC
        DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
        Other Genes Used: Viral, Bacterial, Synthetic (0)
          Summary of Physical Interactions (3 groups)
          protein-protein
          Interacting group
          Assay
          References
          anti tag coimmunoprecipitation, anti tag western blot
          phenotype-based detection assay, fluorescence microscopy, inferred by author, anti bait coimmunoprecipitation, western blot, affinity technology, Identification by mass spectrometry
          anti tag coimmunoprecipitation, anti tag western blot
          Alleles Reported to Model Human Disease (Disease Ontology) (1 alleles)
          Models Based on Experimental Evidence ( 1 )
          Allele
          Disease
          Evidence
          References
          Modifiers Based on Experimental Evidence ( 0 )
          Allele
          Disease
          Interaction
          References
          Alleles Representing Disease-Implicated Variants
          Genetic Tools, Stocks and Reagents
          Sources of Stocks
          Contact lab of origin for a reagent not available from a public stock center.
          Bloomington Stock Center Disease Page
          Related mammalian, viral, bacterial, or synthetic transgenes
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila transgenes
          Allele
          Transgene
          Publicly Available Stocks
          RNAi constructs available
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila classical alleles
          Allele
          Allele class
          Mutagen
          Publicly Available Stocks
          References (4)