crn, Prp8 Interaction report

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General Information

Interaction Type

physical association

Interacting Genes

crn, Prp8

FlyBase ID

FBig0000006756

Interaction Network

Interactions Browser links

crn network

Prp8 network

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Reported Interactions

101009-FH4134_1_14

Reference

(Mintseris et al., 2009.11.23)

Description

physical association

Assay

anti tag coimmunoprecipitation, peptide massfingerprinting

Collection

DPiM-1

Source/Stage

Cell line used

Participants

Corresponds to

Reported as

Role

Note

crn protein

crn-PA

bait

Prp8 protein

Prp8-PA

prey

Experimental entities

Corresponds to

Identifier

Reported

Role

Note

LD21701

DPiM_LD21701

reagent

Bait tag fusion clone

crn protein

LDMPELLWK

identified peptide

N=4

crn protein

AYIDFEVALGETELAR

identified peptide

N=1

crn protein

APAEVQITAEQLLR

identified peptide

N=3

crn protein

YAQWEEQQQEIQR

identified peptide

N=5

crn protein

FVYVHPDVK

identified peptide

N=1

crn protein

FEMGLSHGDSGPDAELNVQLAR

identified peptide

N=4

crn protein

VNQFWYK

identified peptide

N=1

crn protein

KYQYEQEVAANPTNYDAWFDYLR

identified peptide

N=2

crn protein

FAELENLLGDTDR

identified peptide

N=2

crn protein

YQYEQEVAANPTNYDAWFDYLR

identified peptide

N=1

crn protein

DLEILPPPPK

identified peptide

N=3

crn protein

IVSDNGVEEGWEEVFDYIFPEDEMARPNLK

identified peptide

N=1

crn protein

YTYMEEMLENVAGAR

identified peptide

N=2

crn protein

ERDLEILPPPPK

identified peptide

N=1

crn protein

MVVSHWIK

identified peptide

N=1

crn protein

ISDPAELADYQQR

identified peptide

N=3

crn protein

TFEDNLR

identified peptide

N=1

crn protein

WMEWQPEEQAWQTYVNFELR

identified peptide

N=2

crn protein

VLLLEAWR

identified peptide

N=2

crn protein

VWMSFAK

identified peptide

N=1

crn protein

AVEFFGDDYIEER

identified peptide

N=1

crn protein

NKAPAEVQITAEQLLR

identified peptide

N=2

crn protein

DNTVDDPPATAIASEPEPAADAAPADTTDSGDASFLDHSFGAR

identified peptide

N=2

Contains HA tag

crn protein

GYIDLEIQLR

identified peptide

N=1

crn protein

VKNKAPAEVQITAEQLLR

identified peptide

N=1

crn protein

AIFELAVQQPR

identified peptide

N=1

crn protein

AGIEDVIVSK

identified peptide

N=2

crn protein

NVTLWLK

identified peptide

N=1

Prp8 protein

ADWWTNTAHYNR

identified peptide

N=1

Prp8 protein

FAPIPFPPLSYK

identified peptide

N=1

Prp8 protein

WNTALIGLMTYFR

identified peptide

N=1

Prp8 protein

ASVMHDIVDMMPEGIK

identified peptide

N=1

Prp8 protein

QQIAEIEKQTK

identified peptide

N=1

Prp8 protein

ETGYTYILPK

identified peptide

N=1

Prp8 protein

LLENMPMPWEQIR

identified peptide

N=1

Prp8 protein

SSEMAGPPQMPNDFLTFQDTVTETAHPIR

identified peptide

N=1

Prp8 protein

ATEPQMVLFNLYDDWLK

identified peptide

N=1

Prp8 protein

GTYFPTWEGLFWEK

identified peptide

N=1

Prp8 protein

WNLSLPQLATLYR

identified peptide

N=1

Prp8 protein

EELGLIEQAYDNPHEALSR

identified peptide

N=1

Prp8 protein

VPGLPIPIENMILR

identified peptide

N=2

Prp8 protein

YLTEHPDPNNENIVGYNNK

identified peptide

N=1

Prp8 protein

HGDEIITSTTSNYETQTFSSK

identified peptide

N=1

Prp8 protein

QILMASGSTTFTK

identified peptide

N=1

Prp8 protein

KGMLDPLEVHLLDFPNIVIK

identified peptide

N=1

Prp8 protein

DGVWNLQNEITK

identified peptide

N=1

Prp8 protein

WLGNLLSR

identified peptide

N=1

Prp8 protein

YIQPWESEFIDSQR

identified peptide

N=1

Prp8 protein

FTLWWSPTINR

identified peptide

N=1

Prp8 protein

TEDPDLPAFYFDPLINPISHR

identified peptide

N=1

Subregions with role in interaction

Corresponds to

Description

Role

Coordinates

Note

Isoform-specific participants

Corresponds to

Description

Role

Note

Comments concerning this interaction

SAMPLE ID:101009-FH4134

FBrf0218395-6839.DPiM

Reference

(Guruharsha et al., 2011)

Description

physical association

Assay

experimental knowledge based

Collection

DPiM-2

Source/Stage

Cell line used

Participants

Corresponds to

Reported as

Role

Note

crn protein

unspecified role

Prp8 protein

unspecified role

Experimental entities

Corresponds to

Identifier

Reported

Role

Note

Subregions with role in interaction

Corresponds to

Description

Role

Coordinates

Note

Isoform-specific participants

Corresponds to

Description

Role

Note

Comments concerning this interaction

HGScore = 80.13557

References ( 0 )

No references are recorded in FlyBase at present.