A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

ecd, Prp8 Interaction report

General Information
Interaction Type
physical association
Interacting Genes
ecd, Prp8
FlyBase ID
FBig0000011190
Interaction Network
Interactions Browser links
ecd network

Prp8 network
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hide Reported Interactions
hide092510-FH1713_1_2
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ecd protein
ecd-PA
bait
Prp8 protein
Prp8-PA
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
GH14368
DPiM_GH14368
 
reagent
Bait tag fusion clone
ecd protein
ELAQTSVGK
 
identified peptide
N=1
ecd protein
NSVIQPEEPDSTHVR
 
identified peptide
N=2
ecd protein
QVLELPHSAAQLLK
 
identified peptide
N=1
ecd protein
VEGQQLEDLPAWR
 
identified peptide
N=1
ecd protein
EEDFVEYYIFPK
 
identified peptide
N=1
ecd protein
TAPQADEDDFDDIEDFEPININVNTLR
 
identified peptide
N=2
ecd protein
DISESAVASFLDHSFGAR
 
identified peptide
N=1

Contains HA tag
ecd protein
LKEYQIAQPHFSIHR
 
identified peptide
N=1
ecd protein
KTAPQADEDDFDDIEDFEPININVNTLR
 
identified peptide
N=1
ecd protein
DNIEGSAEYQELLNK
 
identified peptide
N=2
ecd protein
LASGLEILATQAK
 
identified peptide
N=1
ecd protein
LGWHLTDPVSEPER
 
identified peptide
N=2
ecd protein
QIQSYMEQMDR
 
identified peptide
N=2
ecd protein
SYLWHKDEFQLQVR
 
identified peptide
N=1
ecd protein
EYQIAQPHFSIHR
 
identified peptide
N=1
ecd protein
IPDNVQDEGALR
 
identified peptide
N=1
ecd protein
DEFQLQVR
 
identified peptide
N=1
ecd protein
IPGSNLEFVREEDFVEYYIFPK
 
identified peptide
N=1
Prp8 protein
VESHFDLELR
 
identified peptide
N=1
Prp8 protein
LTLEDLEDSWDR
 
identified peptide
N=1
Prp8 protein
YELQLANPK
 
identified peptide
N=1
Prp8 protein
SSEMAGPPQMPNDFLTFQDTVTETAHPIR
 
identified peptide
N=1
Prp8 protein
GTYFPTWEGLFWEK
 
identified peptide
N=1
Prp8 protein
AQIAGYLYGVSPPDNPQVK
 
identified peptide
N=1
Prp8 protein
NNVNVASLTQSEIR
 
identified peptide
N=1
Prp8 protein
FGDLILK
 
identified peptide
N=1
Prp8 protein
TAEEVAALIR
 
identified peptide
N=1
Prp8 protein
ITDAYLDQYLWYEADK
 
identified peptide
N=1
Prp8 protein
EELGLIEQAYDNPHEALSR
 
identified peptide
N=1
Prp8 protein
DHNVGDEDWNEFNDINK
 
identified peptide
N=1
Prp8 protein
WGDYDSHDVER
 
identified peptide
N=1
Prp8 protein
LTPSGFEWGSK
 
identified peptide
N=1
Prp8 protein
VPGLPIPIENMILR
 
identified peptide
N=1
Prp8 protein
HGDEIITSTTSNYETQTFSSK
 
identified peptide
N=1
Prp8 protein
DGVWNLQNEITK
 
identified peptide
N=1
Prp8 protein
GMLDPLEVHLLDFPNIVIK
 
identified peptide
N=1
Prp8 protein
YIQPWESEFIDSQR
 
identified peptide
N=1
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:092510-FH1713
hideFBrf0218395-8049.DPiM
Reference
(Guruharsha et al., 2011)
Description
physical association
Assay
experimental knowledge based
Collection
DPiM-2
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ecd protein
unspecified role
Prp8 protein
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
HGScore = 240.51072
hide References ( 0 )
 
No references are recorded in FlyBase at present.