A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Rpn11, Rpn7 Interaction report

General Information
Interaction Type
physical association
Interacting Genes
Rpn11, Rpn7
FlyBase ID
FBig0000014539
Interaction Network
Interactions Browser links
Rpn11 network

Rpn7 network
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hide Reported Interactions
hide033009-FH2055_1_10
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Rpn11 protein
Rpn11-PA
bait
Rpn7 protein
Rpn7-PA
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
RE07468
DPiM_RE07468
 
reagent
Bait tag fusion clone
Rpn11 protein
SLEDEEKMTPEQLAIK
 
identified peptide
N=3
Rpn11 protein
LINPNMLVLGQEPR
 
identified peptide
N=4
Rpn11 protein
LGGAMPQAAPPTDAPVVDTAEQVYISSLALLK
 
identified peptide
N=1
Rpn11 protein
HYYSISINYRK
 
identified peptide
N=1
Rpn11 protein
AVAVVVDPIQSVK
 
identified peptide
N=2
Rpn11 protein
SLEDEEKMTPEQLAIKNVGK
 
identified peptide
N=1
Rpn11 protein
VVIDAFR
 
identified peptide
N=1
Rpn11 protein
AVAVVVDPIQSVKGK
 
identified peptide
N=1
Rpn11 protein
HYYSISINYR
 
identified peptide
N=2
Rpn11 protein
GKVVIDAFRLINPNMLVLGQEPR
 
identified peptide
N=1
Rpn7 protein
FLLTLAEYK
 
identified peptide
N=1
Rpn7 protein
MKENNRVEVEQLDAAIEDAEK
 
identified peptide
N=1
Rpn7 protein
VYQGVYSVAVR
 
identified peptide
N=1
Rpn7 protein
NLGEMEVR
 
identified peptide
N=1
Rpn7 protein
GSEIQEVLHGLPDVK
 
identified peptide
N=1
Rpn7 protein
LGLFYLDHDLITR
 
identified peptide
N=2
Rpn7 protein
VEVEQLDAAIEDAEK
 
identified peptide
N=1
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:033009-FH2055
hideFBrf0218395-749.DPiM
Reference
(Guruharsha et al., 2011)
Description
physical association
Assay
experimental knowledge based
Collection
DPiM-2
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Rpn7 protein
unspecified role
Rpn11 protein
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
HGScore = 144.90870
hide References ( 0 )
 
No references are recorded in FlyBase at present.