A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

CG3107, snRNP-U1-70K Interaction report

General Information
Interaction Type
physical association
Interacting Genes
CG3107, snRNP-U1-70K
FlyBase ID
FBig0000029494
Interaction Network
Interactions Browser links
CG3107 network

snRNP-U1-70K network
Close All Open All
hide Reported Interactions
hideFH1914_1_7
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
CG3107 protein
CG3107-PA

CG3107-PB
bait
snRNP-U1-70K protein
snRNP70K-PA
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
LD22374
DPiM_LD22374
 
reagent
Bait tag fusion clone
CG3107 protein
LAYNDLVEFHK
 
identified peptide
N=2
CG3107 protein
YPVRDPFFK
 
identified peptide
N=1
CG3107 protein
LDNMGTTIDR
 
identified peptide
N=2
CG3107 protein
NDSNNVFSINFR
 
identified peptide
N=2
CG3107 protein
LENKDIFDK
 
identified peptide
N=1
CG3107 protein
VSDMISGLR
 
identified peptide
N=2
CG3107 protein
TGGFDFK
 
identified peptide
N=1
CG3107 protein
GPNSPFYK
 
identified peptide
N=2
CG3107 protein
LENKDIFDKQSK
 
identified peptide
N=1
CG3107 protein
NLIEPNFSGGYNQTTGYSSDTK
 
identified peptide
N=2
CG3107 protein
LFIQNVQNVR
 
identified peptide
N=1
CG3107 protein
IYSYGLFDASK
 
identified peptide
N=2
CG3107 protein
TLNAFDETYK
 
identified peptide
N=1
CG3107 protein
LHLIEDVR
 
identified peptide
N=1
CG3107 protein
GLILDSYQK
 
identified peptide
N=1
CG3107 protein
GVVYNEMK
 
identified peptide
N=2
CG3107 protein
GAFSENAQVFSQNLLNNIFPDHTYR
 
identified peptide
N=2
CG3107 protein
SLLYGVDHIDFMK
 
identified peptide
N=3
CG3107 protein
TGTELWHIDRNDSNNVFSINFR
 
identified peptide
N=1
CG3107 protein
WIINNASFLDHSFGAR
 
identified peptide
N=1

Contains HA tag
CG3107 protein
LTLTMSPDEAYEDKFK
 
identified peptide
N=4
CG3107 protein
GAINTTQSYEPSAISNYEK
 
identified peptide
N=3
CG3107 protein
DTTFVVGLQDLR
 
identified peptide
N=2
CG3107 protein
ISSDGIFSFYSYR
 
identified peptide
N=1
CG3107 protein
LTLTMSPDEAYEDK
 
identified peptide
N=2
CG3107 protein
ISSDGIFSFYSYRDPNSTK
 
identified peptide
N=2
CG3107 protein
ALFTVPYLHQDHPTLR
 
identified peptide
N=1
CG3107 protein
ANQNVIDQQSLFESK
 
identified peptide
N=2
CG3107 protein
LAYNDLVEFHKK
 
identified peptide
N=2
CG3107 protein
VEHISEFELTSYTFR
 
identified peptide
N=2
CG3107 protein
TGTELWHIDR
 
identified peptide
N=1
CG3107 protein
VPTNEITYFK
 
identified peptide
N=1
CG3107 protein
QAELELVEQK
 
identified peptide
N=1
CG3107 protein
HVSGGNPLEIPK
 
identified peptide
N=3
CG3107 protein
TIINSMNDGFDSQHVESVLHNLELSLK
 
identified peptide
N=2
CG3107 protein
FLESLPTFGK
 
identified peptide
N=2
CG3107 protein
TLALLDEEYLSDQSWVDNSYSLIR
 
identified peptide
N=2
CG3107 protein
HQNPNFGNTLLFNSTALWNHDGDVVSNLR
 
identified peptide
N=1
snRNP-U1-70K protein
IKEEPVDDGYPTFDYQNATIKR
 
identified peptide
N=1
snRNP-U1-70K protein
IKEEPVDDGYPTFDYQNATIK
 
identified peptide
N=1
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:FH1914
hideFBrf0218395-1029.DPiM
Reference
(Guruharsha et al., 2011)
Description
physical association
Assay
experimental knowledge based
Collection
DPiM-2
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
snRNP-U1-70K protein
unspecified role
CG3107 protein
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
HGScore = 63.90665
hide References ( 0 )
 
No references are recorded in FlyBase at present.