A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Pomp, Prosβ3 Interaction report

General Information
Interaction Type
physical association
Interacting Genes
Pomp, Prosβ3
FlyBase ID
FBig0000031809
Interaction Network
Interactions Browser links
Pomp network

Prosβ3 network
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hide Reported Interactions
hide032509-FH382_1_8
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Pomp protein
Pomp-PA
bait
Prosβ3 protein
Prosbeta3-PA
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
LD03247
DPiM_LD03247
 
reagent
Bait tag fusion clone
Pomp protein
QVGRLPFLSSSNFMDDVLTGR
 
identified peptide
N=1
Pomp protein
NHEGLGVPLK
 
identified peptide
N=1
Pomp protein
DSELNYNEHQYNR
 
identified peptide
N=3
Pomp protein
NHEGLGVPLKMGMER
 
identified peptide
N=2
Pomp protein
LPFLSSSNFMDDVLTGR
 
identified peptide
N=4
Pomp protein
LRDSELNYNEHQYNR
 
identified peptide
N=4
Pomp protein
NMQMLR
 
identified peptide
N=1
Pomp protein
VQPAEVSVLNATGR
 
identified peptide
N=3
Prosβ3 protein
VFHIGPR
 
identified peptide
N=1
Prosβ3 protein
MFLGLTGLQTDILTVR
 
identified peptide
N=2
Prosβ3 protein
FGIQAQTISTDFK
 
identified peptide
N=1
Prosβ3 protein
FGPYFIEPVVAGLDPK
 
identified peptide
N=3
Prosβ3 protein
FGIQAQTISTDFKK
 
identified peptide
N=2
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:032509-FH382
hide032509-FH133_1_3
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Prosβ3 protein
Prosbeta3-PA
bait
Pomp protein
Pomp-PA
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
LD16402
DPiM_LD16402
 
reagent
Bait tag fusion clone
Prosβ3 protein
VFHIGPR
 
identified peptide
N=1
Prosβ3 protein
DAMSGWGATVYIIEK
 
identified peptide
N=2
Prosβ3 protein
MFLGLTGLQTDILTVR
 
identified peptide
N=5
Prosβ3 protein
FGIQAQTISTDFK
 
identified peptide
N=1
Prosβ3 protein
FGPYFIEPVVAGLDPK
 
identified peptide
N=5
Prosβ3 protein
KNLYETR
 
identified peptide
N=1
Prosβ3 protein
FGIQAQTISTDFKK
 
identified peptide
N=2
Pomp protein
NHEGLGVPLK
 
identified peptide
N=1
Pomp protein
VQPAEVSVLNATGR
 
identified peptide
N=3
Pomp protein
LPFLSSSNFMDDVLTGR
 
identified peptide
N=2
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:032509-FH133
hideFBrf0218395-5069.DPiM
Reference
(Guruharsha et al., 2011)
Description
physical association
Assay
experimental knowledge based
Collection
DPiM-2
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Prosβ3 protein
unspecified role
Pomp protein
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
HGScore = 605.04949
hide References ( 0 )
 
No references are recorded in FlyBase at present.