A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

porin, SmD2 Interaction report

General Information
Interaction Type
physical association
Interacting Genes
porin, SmD2
FlyBase ID
FBig0000045204
Interaction Network
Interactions Browser links
porin network

SmD2 network
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hideFH1674_1_1
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
porin protein
porin-PB

porin-PA
bait
SmD2 protein
snRNP2-PA
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
GH11331
DPiM_GH11331
 
reagent
Bait tag fusion clone
porin protein
TSSGIEFNTAGHSNQESGK
 
identified peptide
N=3
porin protein
VKDYGLTLTEK
 
identified peptide
N=1
porin protein
TSDKLDVGVQLSWASGTSNTK
 
identified peptide
N=2
porin protein
DFVLHTAVNDGQEFSGSIFQR
 
identified peptide
N=4
porin protein
DIFSKGYNFGLWK
 
identified peptide
N=1
porin protein
DGVTLTLSTLVDGK
 
identified peptide
N=2
porin protein
LTTNNFALGYTTK
 
identified peptide
N=6
porin protein
LRDGVTLTLSTLVDGK
 
identified peptide
N=2
porin protein
GPLINASAVLGYQGWLAGYQTAFDTQQSK
 
identified peptide
N=2
porin protein
TKTSSGIEFNTAGHSNQESGK
 
identified peptide
N=1
porin protein
GYNFGLWK
 
identified peptide
N=2
porin protein
VFGSLETK
 
identified peptide
N=1
porin protein
WNTDNTLFTEVAVQDQLLEGLK
 
identified peptide
N=4
porin protein
LDVGVQLSWASGTSNTK
 
identified peptide
N=2
porin protein
ADSDVNIDLK
 
identified peptide
N=1
porin protein
YQLDDDASVR
 
identified peptide
N=1
porin protein
VNNASQVGLGYQQK
 
identified peptide
N=5
porin protein
LSLEGNFAPQSGNK
 
identified peptide
N=3
porin protein
IGVGLELEAASFLDHSFGAR
 
identified peptide
N=3

Contains HA tag
porin protein
VAYGHENVK
 
identified peptide
N=1
SmD2 protein
SELTPEELAR
 
identified peptide
N=1
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:FH1674
hide References ( 0 )
 
No references are recorded in FlyBase at present.