A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Rcd5, shot Interaction report

General Information
Interaction Type
physical association
Interacting Genes
Rcd5, shot
FlyBase ID
FBig0000085838
Interaction Network
Interactions Browser links
Rcd5 network

shot network
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hide Reported Interactions
hide111209-FH4148_1_7
Reference
(Mintseris et al., 2009.11.23)
Description
physical association
Assay
anti tag coimmunoprecipitation, peptide massfingerprinting
Collection
DPiM-1
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Rcd5 protein
Rcd5-PA
bait
shot protein
shot-PQ
prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
GH01794
DPiM_GH01794
 
reagent
Bait tag fusion clone
Rcd5 protein
WYALLYEPAVSR
 
identified peptide
N=2
Rcd5 protein
SNGDFFIANEGKR
 
identified peptide
N=2
Rcd5 protein
RFDDEIVEYNIAVPTNR
 
identified peptide
N=2
Rcd5 protein
WKPIDDLALIIGIQQTNDLR
 
identified peptide
N=2
Rcd5 protein
FTFLVNYELINAIR
 
identified peptide
N=2
Rcd5 protein
KALYSVQEEDLLGTIK
 
identified peptide
N=1
Rcd5 protein
DEALEMER
 
identified peptide
N=1
Rcd5 protein
SLQNHWLLLK
 
identified peptide
N=2
Rcd5 protein
TSNPLNASFLDHSFGAR
 
identified peptide
N=1

Contains HA tag
Rcd5 protein
LEQFQELLDK
 
identified peptide
N=2
Rcd5 protein
FTLQELQQR
 
identified peptide
N=1
Rcd5 protein
NGRPMGQMATK
 
identified peptide
N=1
Rcd5 protein
SNGDFFIANEGK
 
identified peptide
N=1
Rcd5 protein
AIFIDGTPLLSANK
 
identified peptide
N=3
Rcd5 protein
SSEQPKLEQFQELLDK
 
identified peptide
N=1
Rcd5 protein
KRFDDEIVEYNIAVPTNR
 
identified peptide
N=1
Rcd5 protein
NLHPELVESVQR
 
identified peptide
N=1
Rcd5 protein
LLENELSR
 
identified peptide
N=1
Rcd5 protein
NPISNLQIEQQNDQK
 
identified peptide
N=2
Rcd5 protein
FDDEIVEYNIAVPTNR
 
identified peptide
N=1
shot protein
GGILSPLSTGSSGFGSR
 
identified peptide
N=1
shot protein
VGGGWVALDEFLQK
 
identified peptide
N=1
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
 
SAMPLE ID:111209-FH4148
hide References ( 0 )
 
No references are recorded in FlyBase at present.