Snap, koko Interaction report

General Information

Interaction Type

physical association

Interacting Genes

Snap, koko

FlyBase ID

FBig0000095309

Interaction Network

Interactions Browser links

Snap network

koko network

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Reported Interactions

FH33-C_1_30

Reference

(Mintseris et al., 2009.11.23)

Description

physical association

Assay

anti tag coimmunoprecipitation, peptide massfingerprinting

Collection

DPiM-1

Source/Stage

Cell line used

Participants

Corresponds to

Reported as

Role

Note

Snap protein

Snap-PA

bait

koko protein

koko-PF

prey

Experimental entities

Corresponds to

Identifier

Reported

Role

Note

LD21601

DPiM_LD21601

reagent

Bait tag fusion clone

Snap protein

HHQSIAEMYESDPNNLAK

identified peptide

N=9

Snap protein

IKKAADEDPDLR

identified peptide

N=1

Snap protein

SIDIYTDMGRFTMAAK

identified peptide

N=1

Snap protein

LDQWYTTILLR

identified peptide

N=1

Snap protein

AISIYEQVAASSLESSLLK

identified peptide

N=1

Snap protein

AGECFCEAATLHAR

identified peptide

N=1

Snap protein

HDAGTCYVDASNCYKK

identified peptide

N=1

Snap protein

GFLGSLFGGSNK

identified peptide

N=1

Snap protein

SIQHYEQAADYFK

identified peptide

N=3

Snap protein

VAQYAAQLEDYEK

identified peptide

N=5

Snap protein

ALQLMAEAEK

identified peptide

N=2

Snap protein

ALQLMAEAEKK

identified peptide

N=5

Snap protein

ALQLMAEAEKKLTQQK

identified peptide

N=1

Snap protein

SIDIYTDMGR

identified peptide

N=2

Snap protein

KVDVESAVNCLMK

identified peptide

N=1

Snap protein

YAQQYPAFQDSR

identified peptide

N=3

Snap protein

SIQHYEQAADYFKGEESVSSANK

identified peptide

N=3

koko protein

RLEDADQDLSK

identified peptide

N=1

koko protein

LEDADQDLSK

identified peptide

N=1

koko protein

RQAQLAASTYDVLQR

identified peptide

N=1

koko protein

SNQIAIETENMGAEVLGELGEQR

identified peptide

N=2

koko protein

QAQLAASTYDVLQR

identified peptide

N=2

Subregions with role in interaction

Corresponds to

Description

Role

Coordinates

Note

Isoform-specific participants

Corresponds to

Description

Role

Note

Comments concerning this interaction

SAMPLE ID:FH33-C

FH959_1_2

Reference

(Mintseris et al., 2009.11.23)

Description

physical association

Assay

anti tag coimmunoprecipitation, peptide massfingerprinting

Collection

DPiM-1

Source/Stage

Cell line used

Participants

Corresponds to

Reported as

Role

Note

Snap protein

Snap-PA

bait

koko protein

koko-PF

prey

Experimental entities

Corresponds to

Identifier

Reported

Role

Note

LD21601

DPiM_LD21601

reagent

Bait tag fusion clone

Snap protein

HHQSIAEMYESDPNNLAK

identified peptide

N=10

Snap protein

VEDAIECYQR

identified peptide

N=1

Snap protein

VLCENLEEQNIEGFTEAVKDYDSISR

identified peptide

N=1

Snap protein

LDQWYTTILLR

identified peptide

N=4

Snap protein

AISIYEQVAASSLESSLLK

identified peptide

N=2

Snap protein

AGECFCEAATLHAR

identified peptide

N=1

Snap protein

KAADEDPDLR

identified peptide

N=2

Snap protein

VLCENLEEQNIEGFTEAVK

identified peptide

N=1

Snap protein

GFLGSLFGGSNK

identified peptide

N=2

Snap protein

SIQHYEQAADYFK

identified peptide

N=3

Snap protein

VAQYAAQLEDYEK

identified peptide

N=4

Snap protein

ALQLMAEAEK

identified peptide

N=6

Snap protein

ALQLMAEAEKK

identified peptide

N=5

Snap protein

SIDIYTDMGR

identified peptide

N=4

Snap protein

AADEDPDLR

identified peptide

N=2

Snap protein

AALCHLSVDLLNAQHAIEK

identified peptide

N=1

Snap protein

YAQQYPAFQDSR

identified peptide

N=4

Snap protein

SIQHYEQAADYFKGEESVSSANK

identified peptide

N=6

koko protein

RLEDADQDLSK

identified peptide

N=2

koko protein

SNQIAIETENMGAEVLGELGEQR

identified peptide

N=4

koko protein

LEDADQDLSK

identified peptide

N=1

koko protein

RQAQLAASTYDVLQR

identified peptide

N=2

koko protein

RLEDADQDLSKSR

identified peptide

N=1

koko protein

SNQIAIETENMGAEVLGELGEQRESLLR

identified peptide

N=2

koko protein

QAQLAASTYDVLQR

identified peptide

N=1

Subregions with role in interaction

Corresponds to

Description

Role

Coordinates

Note

Isoform-specific participants

Corresponds to

Description

Role

Note

Comments concerning this interaction

SAMPLE ID:FH959

FBrf0218395-9196.DPiM

Reference

(Guruharsha et al., 2011)

Description

physical association

Assay

experimental knowledge based

Collection

DPiM-2

Source/Stage

Cell line used

Participants

Corresponds to

Reported as

Role

Note

koko protein

unspecified role

Snap protein

unspecified role

Experimental entities

Corresponds to

Identifier

Reported

Role

Note

Subregions with role in interaction

Corresponds to

Description

Role

Coordinates

Note

Isoform-specific participants

Corresponds to

Description

Role

Note

Comments concerning this interaction

HGScore = 301.15630

References ( 0 )

No references are recorded in FlyBase at present.