FB2025_01 , released February 20, 2025
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000095851
Interaction Network
Interactions Browser links
GABPI network
β4GalNAcTB network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0206521-1.ENZ
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

GABPI

unspecified role

GABPI

unspecified role

GABPI

unspecified role

beta4GalNAcTB

unspecified role

beta4GalNAcTB

unspecified role

beta4GalNAcTB

unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; enzyme produced as a recombinant fusion protein in bacterial system; enzyme target produced as a recombinant fusion protein in bacterial system.

Assayed by immunocytochemical staining against LacdiNAc, a product of the β4GalNAcTB glycosyltransferase reaction, on the cell surface. Both GABPI and β4GalNAcTB cDNAs were required.

FBrf0206521-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

GABPI

bait

HA tag

beta4GalNAcTB

prey

FLAG tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was HEK293 (human embryonic kidney) cell line transfected with tagged GABPI and β4GalNAcTB constructs.

FBrf0206521-3.LM.IM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

GABPI

bait

HA tag

beta4GalNAcTB

prey

FLAG tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
stem region
necessary binding region
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was S2 cell line transfected with tagged GABPI and β4GalNAcTB constructs.

Assayed for localization of β4GalNAcTB protein to the Golgi. Specific regions of β4GalNAcTB protein analyzed by creating chimeric proteins with β4GalNAcTA, which does not interact with the GABPI protein.

FBrf0216778-1.EZ
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TMD3/4 luminal loop
necessary binding region
aa 168-179
TMD5/6 luminal loop
necessary binding region
aa 327-361
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Transiently transfected HEK293 (human embryonic kidney) cells, contransfected with β4GalNAcTB and HA-insertion constructs of GABPI.

Insertion of HA tags in the predicted luminal loops of the GABPI protein disrupted the reaction.

Ability of GABPI protein to activate β4GalNAcTB protein on the cell surface of transfected HEK293 cells assayed by immunostaining against LacdiNAc, a product of the β4GalNAcTB glycosyltransferase reaction.

FBrf0216778-2.EZ
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
P176A
necessary binding region
aa 176

Within TMD3/4 luminal loop; replacement of P176 with Ala eliminates binding.

EE177/178AA
necessary binding region
aa 177-178

Within TMD3/4 luminal loop; replacement of both E178 and E178 with Ala eliminates binding (replacement of one or the other not sufficient).

H335A
necessary binding region
aa 335

Within TMD5/6 luminal loop; replacement of H335 with Ala eliminates binding.

P346A
necessary binding region
aa 346

Within TMD5/6 luminal loop; replacement of P346 with Ala eliminates binding.

LL348/349AA
necessary binding region
aa 348-349

Within TMD5/6 luminal loop; replacement of both L348 and L349 with Ala eliminates binding (replacement of one or the other not sufficient).

C353A
necessary binding region
aa 353

Within TMD5/6 luminal loop; replacement of C353 with Ala eliminates binding.

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Transiently transfected HEK293 (human embryonic kidney) cells, contransfected with β4GalNAcTB and GABPI constructs.

Ability of GABPI protein to activate β4GalNAcTB protein on the cell surface of transfected HEK293 cells assayed by immunostaining against LacdiNAc, a product of the β4GalNAcTB glycosyltransferase reaction.

FBrf0216778-3.EZ
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Transiently transfected HEK293 (human embryonic kidney) cells, transfected with β4GalNAcTB-GABPI fusion constructs.

Expressing mutant GABPI and wild-type β4GalNAcTB as a fusion protein overcomes disruption of the interaction seen with some amino acid replacements (H335A and P346A) in the TMD5/6 luminal loop of the GABPI protein.

Ability of GABPI protein to activate β4GalNAcTB protein on the cell surface of transfected HEK293 cells assayed by immunostaining against LacdiNAc, a product of the β4GalNAcTB glycosyltransferase reaction.

FBrf0216778-4.EZ
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
stem region
necessary binding region
aa 33-42
F34S
necessary binding region
aa 34

Replacement of F34 with Ser eliminates binding.

I41S
necessary binding region
aa 41

Replacement of I41 with Ser eliminates binding.

YY38/40SS
necessary binding region
aa 38-40

Replacement of both Y38 and Y40 with Ser eliminates binding (replacement of one or the other not sufficient).

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Transiently transfected HEK293 (human embryonic kidney) cells, contransfected with β4GalNAcTB and GABPI constructs.

Ability of GABPI protein to activate β4GalNAcTB protein on the cell surface of transfected HEK293 cells assayed by immunostaining against LacdiNAc, a product of the β4GalNAcTB glycosyltransferase reaction.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (2)