FB2025_01 , released February 20, 2025
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000097603
Interaction Network
Interactions Browser links
usp network
EcR network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0055576-1.EMSA.A
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

usp

neutral component
usp 

usp

neutral component
usp 

usp

neutral component
EcR 

EcR

neutral component
EcR 

EcR

neutral component
EcR 

EcR

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Proteins were assayed for cooperative DNA binding to [32]P labeled EcR DNA element from Hsp27 promoter in gel shift assays. Neither usp or EcR bind to DNA alone.

The presence of each usp and EcR in the protein:DNA complex was confirmed by using antibodies to bind and supershift the protein:DNA complex.

Interaction in vitro; proteins produced by in vitro translation.

FBrf0064761-1.EMSA.A
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

neutral component
usp 

USP

neutral component
usp 

USP

neutral component
EcR 

EcR

neutral component
EcR 

EcR

neutral component
EcR 

EcR

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

usp and/or EcR were mixed with [32]P labeled Hsp27 ecdysone-response element DNA. DNA-protein complexes observed by EMSA were used to deduce protein-protein interactions.

usp and EcR bind the DNA probe cooperatively; alone, neither was observed to bind DNA.

Interaction in vitro; proteins produced by in vitro translation.

FBrf0083464-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to LexA DNA-binding domain

usp 
EcR 

EcR

prey

fused to B42 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
usp 
ligand binding domain
sufficient binding region
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast GAL4-BD/VP16-AD

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

FBrf0083464-4.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

neutral component
usp 

USP

neutral component
usp 

USP

neutral component
EcR 

ECR

neutral component
EcR 

ECR

neutral component
EcR 

ECR

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

S2 nuclear extract was mixed with [32]P labeled Hsp27 DNA, then treated with anti-usp or anti-EcR antibodies to detect each protein in the DNA-protein complex (detected as decreased mobility (super shift) of the observed EMSA band).

Together, usp and EcR form a DNA-protein complex with Hsp27 DNA.

Interaction in vitro; proteins derived from S2 nuclear extract.

FBrf0086205-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to GAL4 DNA-binding domain

EcR 

EcR

prey

fused to GAL4 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast GAL4-BD/GAL4-AD

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

FBrf0086205-3.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

fused to GAL4 DNA-binding domain

usp 

USP

prey

fused to GAL4 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast GAL4-BD/GAL4-AD

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

FBrf0148982-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to GAL4 DNA-binding domain

usp 
EcR 

EcR

prey

fused to GAL4 activation domain

EcR 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
usp 
ligand-binding domain
sufficient binding region
aa 172-508
EcR 
ligand-binding domain
sufficient binding region
aa 375-627
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast GAL4-BD/GAL4-AD. Treatment with ecdysone receptor agonist, Muristerone A, increases the usp-EcR interaction.

FBrf0148982-2.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

fused to GAL4 DNA-binding domain

EcR 
usp 

USP

prey

fused to GAL4 activation domain

usp 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
usp 
ligand-binding domain
sufficient binding region
aa 172-508
EcR 
ligand-binding domain
sufficient binding region
aa 375-627
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast GAL4-BD/GAL4-AD. Treatment with ecdysone receptor agonist, Muristerone A, increases the usp-EcR interaction.

FBrf0148982-3.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

neutral component
EcR 

EcR

neutral component
EcR 
EcR 

EcR

neutral component
EcR 
usp 

USP

neutral component
usp 
usp 

USP

neutral component
usp 

USP

neutral component
usp 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
usp 
ligand-binding domain
sufficient binding region
aa 172-508
EcR 
ligand-binding domain
sufficient binding region
aa 375-652
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; components produced as recombinant fusion proteins in yeast system.

FBrf0159222-1.EMSA.A
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

neutral component
EcR 

EcR

neutral component
EcR 

EcR

neutral component
usp 

USP

neutral component
usp 

USP

neutral component
usp 

USP

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; components produced as recombinant fusion proteins in reticulocyte lysate system.

A [32]P ATP labelled 80-bp DNA fragment containing a single GAL4 binding site was used as a DNA target for this experiment.

FBrf0167549-1.XC
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

neutral component

GST tag

usp 
usp 

USP

neutral component

GST tag

usp 
usp 

USP

neutral component

GST tag

EcR 
EcR 

EcR

neutral component

GST tag

EcR 

EcR

neutral component

GST tag

EcR 
EcR 

EcR

neutral component

GST tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
usp 
interaction domain
sufficient binding region
aa 94-179
EcR 
interaction domain
sufficient binding region
aa 256-364
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

proteins were crystallized with IR-1 DNA.

Interaction in vitro; participants produced as a recombinant fusion protein in bacterial system.

FBrf0174397-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to GAL4 DNA-binding domain

usp 
EcR 

EcR

prey

fused to GAL4 activation domain

EcR 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
EcR 
ligand binding domain
sufficient binding region
aa 375-652

coordinates relative to EcR-PB

usp 
ligand binding domain
sufficient binding region
aa 172-508

coordinates relative to usp-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast GAL4-BD/GAL4-AD

FBrf0179134-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to GAL4 DNA-binding domain

usp 
usp 
usp 
usp 
usp 
EcR 

EcR

prey

fused to GAL4 activation domain

EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
EcR 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
EcR 
ligand-binding domain
sufficient binding region
aa 375-652

coordinates relative to EcR-PB

usp 
ligand-binding domain
sufficient binding region
aa 172-508
EcR 
ligand binding domain residue 553
mutation increasing interaction
aa 553

S553A, S553D (stronger increase with mutation to polar residue)

EcR 
ligand binding domain residue 572
mutation decreasing interaction
aa 572

D572A

EcR 
ligand binding domain residue 572
mutation increasing interaction
aa 572

D572S

EcR 
ligand binding domain residue 583
mutation increasing interaction
aa 583

E583L

EcR 
ligand binding domain residue 613
mutation decreasing interaction
aa 613

K613A

EcR 
ligand binding domain residue 615
mutation decreasing interaction
aa 615

L615A

EcR 
ligand binding domain residue 619
mutation increasing interaction
aa 619

T619A, T619K (stronger increase with mutation to polar residue)

EcR 
ligand binding domain residue 463
mutation decreasing interaction
aa 463

I463T

EcR 
ligand binding domain residue 504
mutation decreasing interaction
aa 504

M504R

EcR 
ligand binding domain residue 511
mutation decreasing interaction
aa 511

R511Q

EcR 
ligand binding domain residue 497
mutation increasing interaction
aa 497

K497A, K497E, binding independent of ligand (stronger increase with mutation to polar residue)

EcR 
ligand binding domain residue 626
mutation increasing interaction
aa 626

N626A

EcR 
ligand binding domain residue 647
mutation decreasing interaction
aa 647

E647R

EcR 
ligand binding domain residue 648
mutation decreasing interaction
aa 648

E648K

EcR 
ligand binding domain residue 476
mutation decreasing interaction
aa 476

E476A

EcR 
ligand binding domain residue 531
mutation decreasing interaction
aa 531

S531T

EcR 
ligand binding domain residue 612
mutation decreasing interaction
aa 612

A612V

EcR 
ligand binding domain residue 617
mutation decreasing interaction
aa 617

I617A

EcR 
ligand binding domain residue 617
mutation increasing interaction
aa 617

I617E

usp 
ligand binding domain residue 281
mutation decreasing interaction
aa 281

L281Y, decreased binding upon addition of ligand

usp 
ligand binding domain residue 322
mutation increasing interaction
aa 322

L322G, increased binding upon addition of ligand

usp 
ligand binding domain residue 323
mutation increasing interaction
aa 323

I323A, increased binding upon addition of ligand

usp 
ligand binding domain residues 329-330
mutation decreasing interaction
aa 329-330

C329A+S330N, decreased binding upon addition of ligand

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast GAL4-BD/GAL4-AD

FBrf0179976-1.2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

fused to GAL4 DNA-binding domain

EcR 
usp 

USP

prey

fused to VP16 activation domain

usp 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
EcR 
DEF region
sufficient binding region
aa 362-878
usp 
DEF region
sufficient binding region
aa 230-508
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Muriateron A enhances dimerization of EcR and usp.

Source was S2 cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

S2 cell Two-hybrid system: GAL4-BD/VP16-AD

FBrf0179976-2.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

GST tag

EcR 
usp 

USP

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
EcR 
DEF region
sufficient binding region
aa 362-878
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0183966-1.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait
EcR 

EcR

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of Sf9 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0202965-11.Y2H
Reference
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

fused to LexA DNA-binding domain

usp 

USP

prey

fused to B42 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast LexA-BD/B42-AD

FBrf0202965-15.Y2H
Reference
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to LexA DNA-binding domain

EcR 

EcR

prey

fused to B42 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast LexA-BD/B42-AD

FBrf0202965-25.PD.A
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

GST tag

usp 
EcR 

EcR

prey

[35]S label

EcR 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
usp 
C terminal region
sufficient binding region
aa 172-508
EcR 
N terminal AB region deleted
sufficient binding region
aa 224-878

coordinates relative to EcR-PB, EcR-PG

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0206889-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

fused to LexA DNA-binding domain

EcR 
usp 

USP

prey

fused to B42 activation domain

usp 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
EcR 
ligand-binding domain
sufficient binding region
aa 375-652

coordinates relative to EcR-PB

usp 
ligand-binding domain
sufficient binding region
aa 172-508

coordinates relative to usp-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast LexA-BD/B42-AD

Positive control.

FBrf0206889-10.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

fused to GAL4 DNA-binding domain

usp 

USP

prey

fused to VP16 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was Drosophila melanogaster L57-3-11 cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast GAL4-BD/VP16-AD

Luciferase reporter was used to assess two hybrid activity.

Positive control.

FBrf0206889-2.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait

fused to LexA DNA-binding domain

usp 
EcR 

EcR

prey

fused to B42 activation domain

EcR 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
EcR 
ligand-binding domain
sufficient binding region
aa 375-652

coordinates relative to EcR-PB

usp 
ligand-binding domain
sufficient binding region
aa 172-508

coordinates relative to usp-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast LexA-BD/B42-AD

Positive control.

FBrf0215764-1.BiFC.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

neutral component

YFP tag, N-terminal fragment

EcR 

EcR

neutral component

YFP tag, N-terminal fragment

EcR 

EcR

neutral component

YFP tag, N-terminal fragment

usp 

usp

neutral component

YFP tag, C-terminal fragment

usp 

usp

neutral component

YFP tag, C-terminal fragment

usp 

usp

neutral component

YFP tag, C-terminal fragment

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live CHO-K1 or COS-7 cells; proteins produced from transfected constructs.

FBrf0226757-1.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

usp

bait

FLAG tag

EcR 

EcR

prey

Myc tag

EcR 
EcR 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

Interaction shown with EcR isoforms A and B1

FBrf0227292-601.TFIN
Description
physical association
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 
unspecified role
EcR 
unspecified role
EcR 
unspecified role
usp 
unspecified role
usp 
unspecified role
usp 
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2R+ cell line; proteins produced from transfected construct or endogenous gene.

HGScore = 43.885422

FBrf0229176-1.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait
usp 

USP

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was white prepupae of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Positive control.

FBrf0229176-26a.coIP.MS
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait
EcR 

EcR

prey

8 peptides identified

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was white prepupae of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0229176-3.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

USP

bait
EcR 

EcR

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was white prepupae of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Positive control.

FBrf0229176-7a.coIP.MS
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait
usp 

usp

prey

9 peptides identified

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was white prepupae of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0235228-4.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

usp

bait

HA tag

EcR 

EcR

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of Sf9 cell line; bait produced from recombinant baculovirus; prey produced from recombinant baculovirus.

FBrf0250119-2.PD.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
usp 

Usp

bait

GST tag

EcR 

EcR

prey

His tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced as a recombinant fusion protein in bacterial system.

FBrf0259207-1.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
EcR 

EcR

bait

FLAG tag

usp 

USP

prey

HA tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2R+ cell line; bait produced from transfected construct; prey produced from transfected construct.

Experiment carried out in cells expression EcR, usp and twi.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (20)