FB2025_01 , released February 20, 2025
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000108764
Interaction Network
Interactions Browser links
ftz network
ftz-f1 network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0091385-1.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

Ftz

bait

GST tag

Ftz-F1

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0091385-3a.FW.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

Ftz

bait

GST tag

ftz 

Ftz-F1

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ftz 
N-terminal region
necessary binding region
aa 101-150

coordinates relative to ftz-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0091418-1.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

Ftz

bait

Ftz-F1

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0091418-2.EMSA.A
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

Ftz

neutral component

His tag

ftz 

Ftz

neutral component

His tag

ftz 

Ftz

neutral component

His tag

Ftz-F1

neutral component

His tag

Ftz-F1

neutral component

His tag

Ftz-F1

neutral component

His tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; proteins produced as a recombinant fusion proteins in bacterial system.

ftz and ftz-f1 bind DNA cooperatively.

Various combinations of ftz and ftz-f1 were mixed with [32]P labeled DNA. DNA-protein complexes observed by EMSA were used to deduce protein-protein interactions.

FBrf0109169-1.Y2H
Reference
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

ftz

bait

Ftz-F1

prey

fused to GAL4 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey from embryo cDNA expression library).

Two-hybrid system: yeast ftz-BD/GAL4-AD

This modified two hybrid system used full length ftz and a ftz proximal enhancer.

FBrf0134590-1.FW.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

FTZ

bait
ftz 
ftz 

FTZ-F1

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ftz 
LXXLL nuclear receptor box
necessary binding region
aa 112-118

coordinates relative to ftz-PA

ftz 
homeodomain
necessary binding region
aa 257-265

coordinates relative to ftz-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

Deletion of the ftz LXXLL motif strongly reduces binding to ftz-f1, while deletion of part of the homeodomain has a more modest effect; however, deletion of both regions abolishes the ftz-ftz-f1 interaction.

FBrf0134590-3.FW.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

FTZ-F1

bait
ftz 

ftz

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ligand binding domain
sufficient binding region
aa 567-803

coordinates relative to ftz-f1-PA

AF2 helix
necessary binding region
PTQTLLMEMLHAKRKG
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0138468-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

Ftz

bait

fused to GAL4 DNA-binding domain

Ftz-F1

prey

fused to GAL4 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Multiple regions of ftz-f1 interact with ftz.

Two-hybrid system: yeast GAL4-BD/GAL4-AD

FBrf0138468-2.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

ftz

neutral component
ftz 

ftz

neutral component
ftz 

ftz

neutral component

ftz-f1

neutral component

ftz-f1

neutral component

ftz-f1

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; proteins produced as a recombinant fusion proteins in bacterial system.

ftz and ftz-f1 bind to DNA cooperatively.

ftz and/or ftz-f1 were mixed with [32]P labeled DNA. DNA-protein complexes observed by EMSA were used to deduce protein-protein interactions.

FBrf0139794-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

FTZ

bait

fused to GAL4 DNA-binding domain

ftz 

FTZ-F1

prey

fused to VP16 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ligand binding domain
sufficient binding region
aa 762-1027

coordinates relative to ftz-f1-PB

AF2 helix
necessary binding region
aa 1021-1027

coordinates relative to ftz-f1-PB

ligand binding domain residue V845
mutation disrupting interaction
aa 845

V845R, coordinates relative to ftz-f1-PB

ligand binding domain residue V859
mutation disrupting interaction
aa 859

V859D, coordinates relative to ftz-f1-PB

ligand binding domain residue M863
mutation disrupting interaction
aa 863

M863D or M863R, coordinates relative to ftz-f1-PB

ftz 
LXXLL motif L112 and L113
mutation disrupting interaction
aa 112-113

L112A and L113A, coordinates relative to ftz-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: mammalian GAL4-BD/VP16-AD

FBrf0207535-4.PD.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

FTZ

bait

His tag

Ftz-F1

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0207535-6.PD.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ftz-F1

bait

His tag

ftz 

FTZ

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0215056-1.FW.A
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ftz 

FTZ

bait

GST tag

ftz 

FTZ-F1

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ftz 
interaction domain
sufficient binding region
aa 88-119
LBD domain
sufficient binding region
aa 791-1027
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled in bacterial system.

FBrf0215056-2.SPR
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

FTZ-F1

bait

His tag

ftz 

FTZ

prey
ftz 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ftz 
interaction domain
sufficient binding region
aa 102-120
LBD domain
sufficient binding region
aa 791-1027
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey peptide synthesized in vitro.

FBrf0215056-3.ITC
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

FTZ-F1

bait

His tag

ftz 

FTZ

prey
ftz 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ftz 
interaction domain
sufficient binding region
aa 102-120
LBD domain
sufficient binding region
aa 791-1027
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey peptide synthesized in vitro.

FBrf0215056-4.XC
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

FTZ-F1

bait

His tag

ftz 

FTZ

prey
ftz 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ftz 
interaction domain
sufficient binding region
aa 102-120
LBD domain
sufficient binding region
aa 791-1027
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey peptide synthesized in vitro.

FBrf0238535-1.NMR
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ftz-F1

neutral component

Ftz-F1

neutral component

Ftz-F1

neutral component
ftz 

Ftz

neutral component
ftz 
ftz 

Ftz

neutral component
ftz 

Ftz

neutral component
ftz 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ligand binding domain
sufficient binding region
aa 785-1027
ftz 
LxxLL peptide
sufficient binding region
aa 103-119
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; protein produced as a recombinant fusion protein in bacterial system; ligand peptide synthesized in vitro.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (9)