Dataset mE_mRNA_P9-10_A-to-I_RNA_Editing_Sites

General Information
Name	mE_mRNA_P9-10_A-to-I_RNA_Editing_Sites	Species	D. melanogaster
Dataset type	RNA-Seq transcriptome A-to-I RNA editing sites	FlyBase ID	FBlc0000350
Source & Content
Consists of	cDNA short sequencing reads from high-throughput sequencing, sites of A-to-I RNA editing only. (Graveley et al., 2011)
Created by
Available from
Strain	iso-1 (Graveley et al., 2011)
Stage & tissue
Stage Tissue/Position (including subcellular localization) Reference pharate adult stage P9 -- P10 organism (Graveley et al., 2011) Comment:aged 3 days after collection as white prepupae
Cell Line
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Description & Members
Description	RNA A-to-I editing sites as determined from short sequencing reads of cDNA prepared from mid-late pupae (stage P9-10). For a given stage, the frequency of editing is analyzed. (Graveley et al., 2011)
Parent collections	mE_A-to-I_RNA_Editing_Sites
Component collection(s)
Number in collection
Comment on number in collection
Members
Experimental protocol
Vector
Sample preparation	See report for mE_A-to-I_RNA_Editing_Sites. (Graveley et al., 2011)
Collection preparation	See report for mE_A-to-I_RNA_Editing_Sites. (Graveley et al., 2011)
Mode of assay	See report for mE_A-to-I_RNA_Editing_Sites. (Graveley et al., 2011)
Assay platform	See report for mE_A-to-I_RNA_Editing_Sites. (Graveley et al., 2011)
Data analysis	See report for mE_A-to-I_RNA_Editing_Sites. (Graveley et al., 2011)
Additional data

Associated files
Additional sites
Synonyms & Secondary IDs
Reported As
Symbol Synonym	mE_mRNA_P9-10_A-to-I_RNA_Editing_Sites WPP_3days Edited % (Graveley et al., 2011)
Secondary FlyBase IDs

References ( 1 )
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 29. Summary of A-to-I RNA Editing Sites Discovered. [FBrf0213715]