Dataset NIH_mRNA_Dmel_adults_junctions

General Information
Name	NIH_mRNA_Dmel_adults_junctions	Species	D. melanogaster
Dataset type	RNA-Seq transcriptome junctions	FlyBase ID	FBlc0000449
Source & Content
Consists of	cDNA short sequencing reads from high-throughput sequencing, junctions only. (Malone et al., 2011.8.9)
Created by
Available from
Strain
Stage & tissue

Cell Line
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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Description & Members
Description	Umbrella record for 2 collections of RNA-Seq data from adults. RNA junctions (corresponding to introns) identified and characterized (presented in GBrowse and in RNA junction reports). (Malone et al., 2011.8.9)
Parent collections	NIH_mRNA_Dmel_adults
Component collection(s)	NIH_Dmel_1_M_junctions NIH_Dmel_1_F_junctions
Number in collection	93,733 (Malone et al., 2011.8.9)
Comment on number in collection	Total of uniquely aligned reads for component collections (RNA-Seq transcriptome junctions); determined by FlyBase. (Malone et al., 2011.8.9)
Members
Experimental protocol
Vector
Sample preparation	See report for NIH_mRNA_Dmel_adults. (Malone et al., 2011.8.9)
Collection preparation	See report for NIH_mRNA_Dmel_adults. (Malone et al., 2011.8.9)
Mode of assay	See report for NIH_mRNA_Dmel_adults. (Malone et al., 2011.8.9)
Assay platform	See report for NIH_mRNA_Dmel_adults. (Malone et al., 2011.8.9)
Data analysis	Used >3 offset reads. See report for NIH_mRNA_Dmel_adults. (Malone et al., 2011.8.9)
Additional data

Associated files
Additional sites
Synonyms & Secondary IDs
Reported As
Symbol Synonym	NIH_mRNA_Dmel_adults_junctions
Secondary FlyBase IDs

References ( 1 )
Personal communication to FlyBase	Malone et al., 2011.8.9, mRNA-Seq of adult flies from the genus Drosophila mRNA-Seq of adult flies from the genus Drosophila [FBrf0214763]