Dataset modENCODE_mRNA-Seq_EXTRA_junctions

General Information
Name	modENCODE_mRNA-Seq_EXTRA_junctions	Species	D. melanogaster
Dataset type	RNA-Seq transcriptome junctions	FlyBase ID	FBlc0000460
Source & Content
Consists of	cDNA short sequencing reads from high-throughput sequencing, junctions only. (Graveley, 2011.11.3)
Created by
Available from
Strain	iso-1 (Graveley, 2011.11.3)
Stage & tissue

Cell Line
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Description & Members
Description	Additional low confidence modENCODE junctions identified by RNA-Seq analysis of cDNA prepared from polyadenylated RNA. (Graveley, 2011.11.3)
Parent collections	modENCODE_mRNA-Seq_U
Component collection(s)	mE_mRNA_em0-2hr_EXTRA_junctions mE_mRNA_em2-4hr_EXTRA_junctions mE_mRNA_em4-6hr_EXTRA_junctions mE_mRNA_em6-8hr_EXTRA_junctions mE_mRNA_em8-10hr_EXTRA_junctions mE_mRNA_em10-12hr_EXTRA_junctions mE_mRNA_em12-14hr_EXTRA_junctions mE_mRNA_em14-16hr_EXTRA_junctions mE_mRNA_em16-18hr_EXTRA_junctions mE_mRNA_em18-20hr_EXTRA_junctions mE_mRNA_em20-22hr_EXTRA_junctions mE_mRNA_em22-24hr_EXTRA_junctions mE_mRNA_L1_EXTRA_junctions mE_mRNA_L2_EXTRA_junctions mE_mRNA_L3_12hr_EXTRA_junctions mE_mRNA_L3_PS1-2_EXTRA_junctions mE_mRNA_L3_PS3-6_EXTRA_junctions mE_mRNA_L3_PS7-9_EXTRA_junctions mE_mRNA_WPP_EXTRA_junctions mE_mRNA_P5_EXTRA_junctions mE_mRNA_P6_EXTRA_junctions mE_mRNA_P8_EXTRA_junctions mE_mRNA_P9-10_EXTRA_junctions mE_mRNA_P15_EXTRA_junctions mE_mRNA_AdF_Ecl_1days_EXTRA_junctions mE_mRNA_AdF_Ecl_5days_EXTRA_junctions mE_mRNA_AdF_Ecl_30days_EXTRA_junctions mE_mRNA_AdM_Ecl_1days_EXTRA_junctions mE_mRNA_AdM_Ecl_5days_EXTRA_junctions mE_mRNA_AdM_Ecl_30days_EXTRA_junctions
Number in collection
Comment on number in collection
Members
Experimental protocol
Vector
Sample preparation	See modENCODE_mRNA-Seq_U for details. (Graveley, 2011.11.3)
Collection preparation	See modENCODE_mRNA-Seq_U for details. (Graveley, 2011.11.3)
Mode of assay	See modENCODE_mRNA-Seq_U for details. (Graveley, 2011.11.3)
Assay platform	See modENCODE_mRNA-Seq_U for details. (Graveley, 2011.11.3)
Data analysis	See modENCODE_mRNA-Seq_U for details. (Graveley, 2011.11.3)
Additional data

Associated files
Additional sites
Synonyms & Secondary IDs
Reported As
Symbol Synonym	modENCODE_mRNA-Seq_EXTRA_junctions
Secondary FlyBase IDs

References ( 1 )
Personal communication to FlyBase	Graveley, 2011.11.3, Additional low confidence modENCODE junctions. Additional low confidence modENCODE junctions. [FBrf0217580]