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FB2025_01
,
released February 20, 2025
Tools
Tools Overview & Help
Query by symbols/IDs
Batch Download
Sequence Downloader
ID Validator
Feature Mapper
Search/Browse Portals
QuickSearch
Vocabularies
QueryBuilder
CytoSearch
Interactions Browser
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BLAST
JBrowse
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Coordinates Converter
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modENCODE RNA-Seq
Overview
RNA-Seq Similarity
RNA-Seq Profile
RNA-Seq By Region
JBrowse
Submit Data
Fast-Track Your Paper
Submit Personal Communication
Feedback on Gene Snapshots
Downloads
Overview
Current Release
Archived Data
Map Conversion
FTP Site:
Releases (FTP)
Genomes (FTP)
Links
External Resources
Model Organisms (MODs)
Alliance of Genome Resources
BeeBase
DictyBase
EcoCyc
Gramene
MGI
PomBase
Pseudobase
RGD
SGD
TAIR
VectorBase
WormBase
Xenbase
ZFIN
Stock Collections
Bloomington Drosophila Stock Center (BDSC)
FlyORF
Korea Drosophila Resource Center (KDRC)
Kyoto Stock Center
NIG-FLY
Tsinghua Fly Center (THFC)
Vienna Drosophila Resource Center (VDRC)
BDGP
DGRC
DRSC/TRiP
DIS by issue
FlyBook
FlyExpress
Interactive Fly
Virtual Fly Brain
FlyCyc
Community
Fast-Track Your Paper
FlyBase Community
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Technical Advances
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X (formerly Twitter)
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About
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New In This Release
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Gene Ontology (GO) Annotation
Nontraditional alleles
Vectors & Constructs
New to Flies?
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Programmatic Access
to FlyBase: APIs, etc.
Outreach Funding Opportunity
FlyBase IP blocks
66
th
ADRC
New Metabolic Pathway reports
Bulk data best practices
Previous
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FB2025_01
,
released February 20, 2025
Project: BDGP_genomic_clones
J2G
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General Information
Name
BDGP_genomic_clones
Species
D. melanogaster
Project type
reagent
FlyBase ID
FBlc0003325
Parent Project
Data Provider
BDGP
Title
BDGP generated genomic clone collections.
Accessions
Overview
Description
Project attributes
Biosample type
whole organism
(
FlyBase Curators, 2016-
,
Hoskins et al., 2011
,
Osoegawa et al., 2007
,
Yandell et al., 2005
,
Hoskins et al., 2000
,
Smoller et al., 1991
)
Assay type
RNA-Seq
(
Hoskins et al., 2011
)
Reagent type
genomic clone collection
(
Osoegawa et al., 2007
,
Hoskins et al., 2000
,
Smoller et al., 1991
)
Result type
Key genes
GO term(s)
SO term(s)
BAC_cloned_genomic_insert
(
FlyBase Curators, 2016-
)
cDNA_clone
genomic_clone
Details
Sample preparation
Protocol
Mode of Assay
Data analysis
Comments
Files
Additional Information
BDGP: Genomic Libraries(http://www.fruitfly.org/about/materials/)
(
FlyBase Curators, 2016-
)
Related Datasets
Biosamples generated (9)
Export to HitList
Biosample
Type
Title
BS_AM_cDNA
whole organism
D. melanogaster, iso-1 strain, mixed stages, source for cDNA.
BS_CHORI-221_BAC
whole organism
D. melanogaster, iso-1 strain, adult, source for BAC genomic clones.
BS_CHORI-223_BAC
whole organism
D. melanogaster, iso-1 strain, adult, source for BAC genomic clones.
BS_DrosBAC
whole organism
D. melanogaster, iso-1 strain, embryo, source for BAC genomic clones.
BS_MODENCODE_DM_A_cDNA
whole organism
D. melanogaster, iso-1 strain, adult, source for cDNA.
BS_P1_clones
whole organism
D. melanogaster, iso-1 strain, adult, nucleus, source for P1 genomic clones.
BS_RM_cDNA
whole organism
D. melanogaster, iso-1 strain, embryo, source for cDNA.
BS_RP_cDNA
whole organism
D. melanogaster, iso-1 strain, embryo, source for cDNA.
BS_RPCI-98_BAC
whole organism
D. melanogaster, iso-1 strain, adult, nucleus, source for BAC genomic clones.
Reagent collections (5)
Export to HitList
Reagent collection
Type
Title
CHORI-221_BAC
genomic clone collection
BAC genomic clone collection for D. melanogaster, iso-1 strain, adult, 115kb inserts.
CHORI-223_BAC
genomic clone collection
BAC genomic clone collection for D. melanogaster, iso-1 strain, adult, 48kb inserts.
DrosBAC
genomic clone collection
BAC genomic clone collection for D. melanogaster, iso-1 strain, embryo, 75-150kb inserts.
P1_clones
genomic clone collection
P1 genomic clone collection for D. melanogaster, iso-1 strain, adult.
RPCI-98_BAC
genomic clone collection
BAC genomic clone collection for D. melanogaster, iso-1 strain, adult, 163kb inserts.
Raw data generated (4)
Export to HitList
Assay
Type
Title
AM_cDNA
cDNA sequences of D. melanogaster, iso-1 strain, mixed stages.
MODENCODE_DM_A_cDNA
cDNA sequences of D. melanogaster, iso-1 strain, adult.
RM_cDNA
cDNA sequences of D. melanogaster, iso-1 strain, embryo, 5' ends of capped transcripts.
RP_cDNA
RNA-Seq
RNA-Seq of D. melanogaster, iso-1 strain, embryo, 5' ends of capped transcripts.
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
BDGP_genomic_clones
Name Synonyms
BDGP generated genomic clone collections.
(
FlyBase Curators, 2016-
)
Secondary FlyBase IDs
References (6)
Report Sections
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General Information
Overview
Details
Related Datasets
Synonyms and Secondary IDs
References