FB2020_05, released Oct 14, 2020

Result: microRNA-Seq_Profile_FlyAtlas2_Adult_Female_Head

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General Information
Name
microRNA-Seq_Profile_FlyAtlas2_Adult_Female_Head
Species
D. melanogaster
Result type
RNA-seq profile
FlyBase ID
FBlc0003664
Project
Data Provider
Title
micro RNA-Seq profile of D. melanogaster, Canton-S strain, adult female (7 days), head.
Status
Current
Accessions
    Biosample Source
    Overview
    Strain
    Canton-S
    (Leader et al., 2018)
    Stage
    adult stage
    (Leader et al., 2018)
    Sex
    female
    (Leader et al., 2018)
    Tissue isolated
    adult head
    (Leader et al., 2018)
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    light-dark cycle
    (Leader et al., 2018)
    Sample preparation
    Biosamples analyzed by this result (1)
    Biosample
    Type
    Title
    BS_FlyAtlas2_Adult_Female_Head
    tissue
    D. melanogaster, Canton-S strain, adult female (7 days), head, source for RNA.
    Data Analyzed
    Assay
    short RNA-Seq
    (Leader et al., 2018)
    Assay methods
    total RNA isolation
    (Leader et al., 2018)
    Illumina sequencing
    (Leader et al., 2018)
    Key genes
    Protocol
    Mode of Assay
    Raw Data Analyzed (1)
    Assay / Reagent collection
    Type
    Title
    microRNA-Seq_FlyAtlas2_Adult_Female_Head
    short RNA-Seq
    micro RNA-Seq of D. melanogaster, Canton-S strain, adult female (7 days), head.
    Processed Data Analyzed (0)
    Result
    Type
    Title
    Analysis
    Methods
    Reference Genome
    Reference Annotation
    Data analysis

    Reads from 3 biological replicates were aligned to Dmel_Release_6 reference genome, Ensembl BDGP6, dated March 2016, as provided by Illumina, using the Tuxedo pipeline. The resulting bam files were merged.

    (Leader et al., 2018)
    Comments
    Associated Data
    Size
    Files
    Additional Information
    Synonyms and Secondary IDs (3)
    Reported As
    Symbol Synonym
    Fhd
    (Leader et al., 2018)
    microRNA-Seq_Profile_FlyAtlas2_Adult_Female_Head
    Name Synonyms
    micro RNA-Seq profile of D. melanogaster, Canton-S strain, adult female (7 days), head.
    (Leader et al., 2018)
    Secondary FlyBase IDs
      References (1)