A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

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Citation Vieira, J., Vieira, C.P., Hartl, D.L., Lozovskaya, E.R. (1997). A framework physical map of Drosophila virilis based on P1 clones: applications in genome evolution.  Chromosoma 106(2): 99--107. (Export to RIS)
FlyBase ID FBrf0097690
Publication Type Research paper
PubMed ID 9215559
PubMed Abstract The analysis of patterns of genome evolution may help to evaluate the evolutionary forces that shape the composition and organization of the genome. Comparisons between the physical maps of divergent species can be used to identify conserved blocks of closely linked genes whose synteny is possibly under selective constraint. We have used in situ hybridization to determine the genomic position of 732 randomly selected clones from a bacteriophage P1 library of Drosophila virilis. The resulting map includes at least one clone in each of 69% of the subdivisions into which the D. virilis polytene chromosomes are divided. A subset of these clones was used to carry out a comparative physical analysis of chromosome 2 from D. virilis and from Drosophila montana. A number of discrepancies with the classical scenario of chromosome evolution were noted. The D. virilis P1 clones were also used to determine the physical relations between ten genes that are located in the X chromosome of Drosophila melanogaster between the markers crn (2F1) and omb (4C5-6). In this region, which is approximately 2 Mb in length, there have been at least six breakpoints since the divergence of the species, and six of the genes are found at widely scattered locations in the D. virilis X chromosome. However, a block of four functionally unrelated genes, including white, roughest, Notch, and dunce, seems to be conserved between the two species.
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Language of Publication English
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Publication Type Journal
Abbreviation Chromosoma
Title Chromosoma
Publication Year 1939-
ISBN/ISSN 0009-5915
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