Reference
Citation
Florea, L., Hartzell, G., Zhang, Z., Rubin, G.M., Miller, W. (1998). A computer program for aligning a cDNA sequence with a genomic DNA sequence.  Genome Res. 8(9): 967--974.
FlyBase ID
FBrf0105376
Publication Type
Research paper
Abstract
We address the problem of efficiently aligning a transcribed and spliced DNA sequence with a genomic sequence containing that gene, allowing for introns in the genomic sequence and a relatively small number of sequencing errors. A freely available computer program, described herein, solves the problem for a 100-kb genomic sequence in a few seconds on a workstation.
PubMed ID
PubMed Central ID
PMC310774 (PMC) (EuropePMC)
DOI
Associated Information
Comments
Associated Files
Other Information
Secondary IDs
    Language of Publication
    English
    Additional Languages of Abstract
    Parent Publication
    Publication Type
    Journal
    Abbreviation
    Genome Res.
    Title
    Genome Research
    Publication Year
    1995-
    ISBN/ISSN
    1088-9051
    Data From Reference
    Genes (1)