A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

Reference
Citation Whitfield, E. (2000.6.22). FlyBase error report for CG5227 on Thu Jun 22 06:51:10 2000.  (Export to RIS)
FlyBase ID FBrf0129220
Publication Type Personal communication to FlyBase
PubMed ID
PubMed Abstract
Text of Personal Communication
From FlyBase-error@XXXXXXXXXXXXXXX Thu Jun 22 14:45:30 2000
Envelope-to: gm119@XXXXXXXXXXXXXXX
Delivery-date: Thu, 22 Jun 2000 14:45:30 \+0100
From: FlyBase-error@XXXXXXXXXXXXXXX
Date: Thu, 22 Jun 2000 06:51:10 \-0700 (PDT)
X-Authentication-Warning: hedgehog.lbl.gov: web set sender to FlyBase-error
using \-f
To: flybase-updates@XXXXXXXXXXXXXXX
Cc: eleanor@XXXXXXXXXXXXXXX
Subject: FlyBase error report for CG5227 on Thu Jun 22 06:51:10 2000
Content-Length: 984
Error report from Eleanor Whitfield (eleanor@XXXXXXXXXXXXXXX)
Gene or accession: CG5227
Gene annotation error
Gene CG5227 has incorrect exon/intron structure.
Comments: CDS feature of Celera sequence (AE003418; AAF45541) has a different
splice
site for the first exon/intron junction compared to EDGP annotation (AL132792;
CAB65848) and sequence submission from Nguyen et al U88578; AAD09632.1. The
differing splice sites means the length of the protein varies from 2221-2224
amino acids.
EDGP MLKSAASSLRRRRPKTTITATLAIEMPSQPKLASLLAVLVLLCYCDSCFFCYADANLQQQ
Nguyen MLKSAASSLRRRRPKTTITATLAIEMPSQPKLASLLAVLVLLCYCDSCFFCYADANLQQQ
Celera MLKSAASSLRRRRPKTTITATLAIEMPSQPKLASLLAVLVLLCYCDSCFFY---ANLQQQ
Could you please correct the splice site and amend the CDS and mRNA features.
thanks
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