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| Citation | Misra, S. (2001.8.16). FlyBase error report for CG18225 on Thu Aug 16 15:18:25 2001. (Export to RIS) | ||
| FlyBase ID | FBrf0137500 | ||
| Publication Type | Personal communication to FlyBase | ||
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| Text of Personal Communication |
From: FlyBase-error@XXXXXXXXXXXXXXX
Date: Thu, 16 Aug 2001 15:18:25 \-0700 (PDT) To: flybase-updates@XXXXXXXXXXXXXXX Cc: sima@XXXXXXXXXXXXXXX Subject: FlyBase error report for CG18225 on Thu Aug 16 15:18:25 2001 Error report from Sima Misra (sima@XXXXXXXXXXXXXXX) Gene or accession: CG18225 Release: 1 Gene annotation error Gene CG18225 has a mistake in the supporting evidence or functional assignment. Comments: CG18225 can be deleted--it appears to be part of a Waldo-A element (just 83% identity but over its whole length). Query= CG18225|FBgn0033011|CT41254|FBan0018225 GO:<up></up> located on: 2R 41F3-41F3; |cDNA sequence (306 letters) Database: /data/blast/db/na_te.dros 55 sequences; 282,078 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N gb|AC005734|Waldo-A WALDOA 5150bp 963 3.7e-40 1>gb|AC005734|Waldo-A WALDOA 5150bp Length = 5171 Plus Strand HSPs: Score = 963 (150.5 bits), Expect = 3.7e-40, P = 3.7e-40 Identities = 231/276 (83%), Positives = 231/276 (83%), Strand = Plus / Plus Query: 1 ATGGCCCTTAATCCTCGGAGCCATGAACTGAATGGGGATTGCGGAGTATCTGAGGATAGT 60 ||||||| ||||||||| |||||| || | |||||||| ||||||| || |||||||| Sbjct: 3554 ATGGCCCGTAATCCTCGCGGCCATGTACCGTATGGGGATCCCGGAGTACCTAAGGATAGT 3613 Query: 61 CGTTGGCAGCTACTTTACGGACCGGGTCCTATGGTGCGATACGGAAGCTGGCCCAAAATG 120 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 3614 CGTTGGCAGCTACTTTAGGGACCGGGTCCTATGGTACGATACGGAAGATGGCCCAAAAAG 3673 Query: 121 ATACCGAGTTTCGGCAGGTGTTCCCCAAGAATCGGTACGTGGACCAATCCTGTAGAACAT 180 ||||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||| Sbjct: 3674 ATACCGAGTTTCGGCAGGTGTTCCCCAAGGATCGGTACTTGGACCAATCCTATGGAACAT 3733 Query: 181 CATGTACGATGGGATCTTGGGCATCAACAGGCCCGTGGGAGTAGGGTGGCAAT-TACAGC 239 ||||||||||||||||||||||||||||||||||| ||||||| | ||| | | || Sbjct: 3734 TATGTACGATGGGATCTTGGGCATCAACAGGCCCGTAGGAGTAGAGCTGCATTGTTTTGC 3793 Query: 240 AGCCGCCAAAACAATCGCAGG-GTTGCAAGATAAAT 274 | || ||||| ||| || | | | ||| Sbjct: 3794 TGACGATGTGGCAATCACAGCTGTCTCGAAAACAAT 3829 Score = 284 (48.7 bits), Expect = 2.3e-09, P = 2.3e-09 Identities = 132/211 (62%), Positives = 132/211 (62%), Strand = Plus / Plus Query: 96 GCGATACGGAAGCTGGCCCAAAATGATACCGAGTTTCGGCAGGTGTTCCCCAAGAATCGG 155 | | | ||| || || || || ||| | | || | | | | || | | | Sbjct: 3679 GAGTTTCGGCAGGTGTTCCCCAAGGAT-CGGTACTTGGACCAATCCTATGGAACATTATG 3737 Query: 156 TACG-TGGACCAATCCTGTAGAACATCATGTACGATGGGATCTTGGGCATCAACAGGCCC 214 |||| ||| ||| || | || || | || | ||| | | || || | Sbjct: 3738 TACGATGGG---ATCTTGGGCATCAACAGGCCCG-TAGGAG-TAGAGCTGCATT-GTTTT 3791 Query: 215 GTGGGAGTAGGGTGGCAATTACAGCAGCCGCCAAAACAATCGCAGGGTTGCAAGATAAAT 274 | | | | | ||||||| ||||| | | | |||||||||||||||||| |||| |||| Sbjct: 3792 GCTGACG-ATG-TGGCAATCACAGCTGTCTCGAAAACAATCGCAGGGTTGGAAGACAAAT 3849 Query: 275 GTAACATTACGATTGGTGCTACCATCCACTG 305 | ||| |||||| |||||| |||||| ||| Sbjct: 3850 GCAACTCTACGATCGGTGCTGCCATCCGCTG 3880 |
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| Language of Publication | English | ||
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