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Reference Report
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| Citation | Kovalick, G. (2002.11.6). FlyBase error report for CG11977 on Wed Nov 6 12:39:58 2002. (Export to RIS) | ||
| FlyBase ID | FBrf0155345 | ||
| Publication Type | Personal communication to FlyBase | ||
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| Text of Personal Communication |
From: FlyBase-error@XXXXXXXXXXXXXXX
Date: Wed, 6 Nov 2002 12:39:58 \-0800 To: flybase-updates@XXXXXXXXXXXXXXX Cc: kovalick_g@XXXXXXXXXXXXXXX Subject: FlyBase error report for CG11977 on Wed Nov 6 12:39:58 2002 Error report from Gae Kovalick (kovalick_g@XXXXXXXXXXXXXXX) Gene or accession: CG11977 Release: 3 Gene annotation error Gene CG11977 has incorrect exon/intron structure or translation start site. Gene cDNA sequence: >CG11977 atgaatcttttgtgggctatagtgattgtggccgaactgaaatgtcatacgggccatactccacccgattactgcaatg cagacatttgtccggccaacaagaagcacatcacctgcggcttcaaattttggtctacgaaatgcggtagaaatcacga gggcgtcaggatgagcgattatcgctatgatatcgtgaggaatgtgaacaactttcgacggaagttggaatggggcctg gggaatctgcccagagcggtcaaatttaagaacatcaagtgggacgatgagctgtcggtgatggcgatgcgggtctcta atcaatgcttgcagcacactttctcaccctgcgtgaatacgttcctctacaaggatgtgggcgagtcctcagatttcgt caaggtgcagaacacttccaagggcttcaacgtgatcagcttcctgaatatgtggttcgaataccacaagatgatgaag cccagctatgtgaacaactttcccaatatagcccctcaggatcggctcattatcttcgccaatctgatctacgagaaga acaagaaaatgggctgcggaatggtgaagtcggggcaggggcgcttcctgacctgcctcttcgataagaaaatcaagcc aaaccagaagctttacaccactcggttgaatgatccatttcgcacaaatcggaaaacaaacgaaacagaatcgatccaa tcgaatagtagtagcacagaagcaattgtaaatttgaacacagcgtataaatag Protein sequence: >CG11977 MNLLWAIVIVAELKCHTGHTPPDYCNADICPANKKHITCGFKFWSTKCGRNHEGVRMSDYRYDIVRNVNNFRRKLEWGL GNLPRAVKFKNIKWDDELSVMAMRVSNQCLQHTFSPCVNTFLYKDVGESSDFVKVQNTSKGFNVISFLNMWFEYHKMMK PSYVNNFPNIAPQDRLIIFANLIYEKNKKMGCGMVKSGQGRFLTCLFDKKIKPNQKLYTTRLNDPFRTNRKTNETESIQ SNSSSTEAIVNLNTAYK Comments: CG11977 has sequence similarity to SCP/TPX-1/Ag5/PR-1/Sc (SCP/TAPS) proteins. In vespid wasps, Ag5 proteins have a sequence containing four conserved cysteines in a domain N-terminal to the SCP/TAPS domain. The four conserved cysteines participate in disulfide bonding. A similar domain with four conserved cysteines is also present in some Drosophila proteins with an SCP/TAPS domain. These proteins include Agr, Agr2, CG9400, CG6628, CG8072, CG5106, CG5207, CG10284, CG17210, CG3640, CG9822, CG13569, and CG17575. A sequence with similarity to this N-terminal domain lies upstream of the CG11977 SCP/TAPS domain. The sequence is interrupted by an apparent phase 0 intron. A phase 0 intron with a similar location is present in Agr, CG3640, CG9822, CG17575, CG6628, CG8072, CG5106, CG5207, CG10284, and CG17210. |
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| Language of Publication | English | ||
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Data from Reference
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| Genes (16)
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