A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

Reference
Citation Robertson, H. (2003.6.17). FlyBase error report for Gr64f on Mon Jun 16 23:52:20 2003.  (Export to RIS)
FlyBase ID FBrf0159822
Publication Type Personal communication to FlyBase
PubMed ID
PubMed Abstract
Text of Personal Communication
From flybase-error@XXXXXXXXXXXXXXX Tue Jun 17 07:53:21 2003
Envelope-to: gm119@XXXXXXXXXXXXXXX
Delivery-date: Tue, 17 Jun 2003 07:53:21 \+0100
From: FlyBase-error@XXXXXXXXXXXXXXX
Date: Mon, 16 Jun 2003 23:52:21 \-0700
To: flybase-updates@XXXXXXXXXXXXXXX
Cc: hughrobe@XXXXXXXXXXXXXXX
Subject: FlyBase error report for Gr64f on Mon Jun 16 23:52:20 2003
Error report from Hugh Robertson (hughrobe@XXXXXXXXXXXXXXX)
Gene or accession: Gr64f
Release: 3
Gene annotation error
Gene Gr64f has incorrect exon/intron structure or translation start site.
Gene cDNA sequence:>DmGr64f.cDNA
ATGAAGATTCTTCCGAAGCTGGAGCGCAAGTTGAGGCGGCTGAAGAAAAGGGTAACCCGGACATCACTGTTCAGAAAATT
GGATTTGGTTCACGAGAGTGCCCGAAAAAAGGCATTTCAAGAGAGTTGTGAGACCTACAAAAATCAGATTGAGAATGAGT
ACGAAATCAGGAATAGTTTGCCCAAGCTGTCTCGTAGCGATAAGGAGGCATTCCTCAGCGATGGAAGCTTCCACCAGGCG
GTGGGCAGAGTGCTCCTAGTGGCGGAGTTCTTTGCCATGATGCCGGTCAAGGGTGTGACGGGCAAACATCCTTCGGATCT
GAGCTTCTCTTGGCGCAACATACGCACCTGTTTCAGTCTGCTTTTCATCGCCTCGAGCTTAGCTAACTTTGGACTGTCGT
TGTTTAAGGTGTTAAACAATCCGATTAGTTTCAACAGTATTAAGCCCATTATATTCCGGGGTTCTGTCCTGCTGGTCTTG
ATAGTGGCTCTTAATCTGGCTAGGCAGTGGCCCCAGTTGATGATGTACTGGCACACGGTGGAGAAGGATCTGCCGCAGTA
CAAGACACAGTTGACCAAGTGGAAGATGGGTCATACCATTTCCATGGTCATGCTGCTGGGAATGATGCTGTCCTTTGCGG
AGCATATCCTGAGCATGGTATCGGCCATAAACTACGCCTCATTCTGCAACCGCACCGCCGATCCCATCCAGAACTACTTT
CTGCGCACCAACGATGAGATCTTCTTCGTGACCAGCTACTCCACAACTCTGGCCTTGTGGGGCAAATTCCAGAATGTGTT
TTCGACCTTCATATGGAACTACATGGACCTGTTCGTGATGATTGTGAGCATTGGACTGGCTTCGAAGTTTCGCCAGCTCA
ACGATGATTTGCGAAACTTTAAAGGAATGAATATGGCTCCATCTTACTGGTCAGAGCGTCGTATTCAGTACAGAAATATA
TGCATACTGTGCGACAAAATGGACGATGCCATATCACTCATAACAATGGTGTCCTTCTCCAACAACTTGTATTTCATTTG
CGTCCAGTTGCTGAGAAGCTTGAACACTATGCCATCGGTGGCCCATGCTGTGTACTTTTACTTCTCGCTCATCTTTCTAA
TTGGTCGCACTCTGGCGGTTTCACTGTACTCCTCGAGTGTTCATGATGAATCCAGGCTGACTTTGAGATATCTGCGCTGT
GTGCCCAAGGAGTCCTGGTGTCCGGAGGTGAAACGATTTACGGAGGAGGTAATCAGCGATGAGGTGGCCCTCACTGGCAT
GAAGTTTTTCCACCTCACAAGGAAGCTGGTGCTGAGTGTGGCTGGAACCATCGTCACGTACGAACTTGTTCTCATCCAAT
TTCATGAGGACAACGACCTGTGGGACTGCGATCAGAGCTATTACTCATAG
Protein sequence:>DmGr64f
MKILPKLERKLRRLKKRVTRTSLFRKLDLVHERARKKAFQESCETYKNQIENEYEIRNSLPKLSRSDKEAFLSDGSFHQ
AVGRVLLVAEFFAMMPVKGVTGKHPSDLSFSWRNIRTCFSLLFIASSLANFGLSLFKVLNNPISFNSIKPIIFRGSVLL
VLIVALNLARQWPQLMMYWHTVEKDLPQYKTQLTKWKMGHTISMVMLLGMMLSFAEHILSMVSAINYASFCNRTADPIQ
NYFLRTNDEIFFVTSYSTTLALWGKFQNVFSTFIWNYMDLFVMIVSIGLASKFRQLNDDLRNFKGMNMAPSYWSERRIQ
YRNICILCDKMDDAISLITMVSFSNNLYFICVQLLRSLNTMPSVAHAVYFYFSLIFLIGRTLAVSLYSSSVHDESRLTL
RYLRCVPKESWCPEVKRFTEEVISDEVALTGMKFFHLTRKLVLSVAGTIVTYELVLIQFHEDNDLWDCDQSYYS
Comments: In the original annotation revision I sent a long time ago I made a
mistake, revealed by comparison with the D. pseudoobscura ortholog. I missed
an exon in the first current intron. This corrected gene structure also makes
it more similar to its paralog, Gr64e.
DOI
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