A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

Reference
Citation Robertson, H. (2003.6.18). FlyBase error report for CG17213 on Tue Jun 17 20:51:57 2003.  (Export to RIS)
FlyBase ID FBrf0159824
Publication Type Personal communication to FlyBase
PubMed ID
PubMed Abstract
Text of Personal Communication
From: FlyBase-error@XXXXXXXXXXXXXXX
Date: Tue, 17 Jun 2003 20:51:57 \-0700
To: flybase-updates@XXXXXXXXXXXXXXX
Cc: hughrobe@XXXXXXXXXXXXXXX
Subject: FlyBase error report for CG17213 on Tue Jun 17 20:51:57 2003
Error report from Hugh Robertson (hughrobe@XXXXXXXXXXXXXXX)
Gene or accession: CG17213
Release: 3
Gene annotation error
Gene CG17213 has incorrect exon/intron structure or translation start site.
Gene cDNA sequence:
>DmGr33a.cDNA
ATGATTCAAATTATGAATTGGTTTTCAATGGTCATAGGCCTCATTCCACTGAATCGCCAGCAATCGGAAACTAACTTCAT
ACTCGACTACGCCATGATGTGCATTGTGCCCATCTTCTATGTGGCTTGCTATCTTCTCATAAATCTTAGCCACATTATTG
GCCTCTGTTTACTGGACTCTTGCAATAGTGTTTGCAAGCTGAGCAGCCATCTCTTTATGCATTTGGGCGCATTTCTATAT
CTGACCATCACCCTGCTGTCACTTTATCGCCGAAAGGAGTTTTTCCAGCAGTTTGATGCGAGACTTAATGACATTGATGC
AGTTATCCAGAAATGCCAGCGGGTGGCGGAAATGGACAAGGTGAAGGTTACTGCGGTGAAACACAGTGTGGCCTATCACT
TCACCTGGCTTTTCCTATTCTGCGTTTTCACCTTTGCCCTTTACTATGACGTCAGATCTTTGTACTTGACCTTCGGCAAT
CTCGCCTTCATTCCGTTCATGGTGTCCAGTTTCCCATATTTGGCCGGCAGCATCATTCAGGGTGAGTTCATCTATCACGT
GTCGGTCATCTCGCAGCGCTTCGAGCAGATTAACATGCTGCTGGAGAAGATTAACCAGGAGGCGCGCCATCGCCACGCAC
CCCTTACCGTGTTCGATATCGAGAGCGAGGGCAAAAAGGAGCGGAAGACCGTTACACCGATTACGGTCATGGACGGCAGG
ACGACGACAGGATTTGGCAATGAGAACAAGTTCGCCGGCGAAATGAAGCGCCAGGAGGGGCAACAAAAGAACGACGATGA
CGATTTGGACACCAGCAACGACGAGGACGAGGATGACTTTGATTATGACAATGCCACCATCGCGGAAAATACTGGAAACA
CATCGGAAGCCAATTTACCAGATCTCTTCAAGCTGCATGATAAAATCCTGGCGCTCAGCGTGATTACAAACGGCGAGTTT
GGACCACAGTGTGTACCCTATATGGCGGCCTGCTTTGTGGTGAGCATCTTTGGCATTTTCCTGGAGACCAAGGTCAACTT
CATTGTGGGCGGCAAGAGTCGACTGCTGGACTATATGACCTATTTGTACGTGATTTGGAGCTTCACCACCATGATGGTGG
CCTACATAGTGCTTCGACTATGCTGCAATGCCAACAATCATTCCAAACAATCGGCGATGATTGTCCATGAGATTATGCAA
AAGAAACCGGCATTTATGTTGAGCAACGATCTGTTCTACAACAAAATGAAGTCATTCACACTGCAGTTTCTTCACTGGGA
GGGTTTCTTTCAATTCAACGGCGTGGGATTGTTTGCTCTGGACTACACATTCATTTTCTCGACTGTAAGTGCAGCCACAT
CCTATTTAATTGTCCTGCTGCAGTTTGACATGACTGCAATTTTGCGCAACGAGGGGCTAATGTCATAA
Protein sequence:>DmGr33a
MIQIMNWFSMVIGLIPLNRQQSETNFILDYAMMCIVPIFYVACYLLINLSHIIGLCLLDSCNSVCKLSSHLFMHLGAFL
YLTITLLSLYRRKEFFQQFDARLNDIDAVIQKCQRVAEMDKVKVTAVKHSVAYHFTWLFLFCVFTFALYYDVRSLYLTF
GNLAFIPFMVSSFPYLAGSIIQGEFIYHVSVISQRFEQINMLLEKINQEARHRHAPLTVFDIESEGKKERKTVTPITVM
DGRTTTGFGNENKFAGEMKRQEGQQKNDDDDLDTSNDEDEDDFDYDNATIAENTGNTSEANLPDLFKLHDKILALSVIT
NGEFGPQCVPYMAACFVVSIFGIFLETKVNFIVGGKSRLLDYMTYLYVIWSFTTMMVAYIVLRLCCNANNHSKQSAMIV
HEIMQKKPAFMLSNDLFYNKMKSFTLQFLHWEGFFQFNGVGLFALDYTFIFSTVSAATSYLIVLLQFDMTAILRNEGLMS
Comments: Comparison with D. pseudoobscura shows that the donor splice site
for the first intron should be a little earlier than in the current annotation.
DOI
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