A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

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Citation Lai, E.C., Wiel, C., Rubin, G.M. (2004). Complementary miRNA pairs suggest a regulatory role for miRNA:miRNA duplexes.  RNA 10(2): 171--175. (Export to RIS)
FlyBase ID FBrf0175113
Publication Type Research paper
PubMed ID 14730015
PubMed Abstract microRNAs (miRNAs) are 21-22-nucleotide noncoding RNAs that are widely believed to regulate complementary mRNA targets. However, due to the modest amount of pairing involved, only a few out of the hundreds of known animal miRNAs have thus far been connected to mRNA targets. Here, we considered the possibility that miRNAs might regulate non-mRNA targets, namely other miRNAs. To do so, we conducted a systematic assessment of the nearly complete catalogs of animal miRNAs for potential miRNA:miRNA complements. Our analysis uncovered several compelling examples that strongly suggest a function for miRNA duplexes, thus adding a potential layer of regulatory sophistication to the small RNA world. Interestingly, the most striking examples involve miRNAs complementary to members of the K-box family and Brd-box family, two classes of miRNAs previously implicated in regulation of Notch target genes. We emphasize that patterns of nucleotide constraint indicate that miRNA complementarity is not a simple consequence of miRNA:miRNA* complementarity; however, our findings do suggest that the potential regulatory consequences of the latter also deserve investigation.
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Language of Publication English
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Publication Type Journal
Abbreviation RNA
Title RNA (New York, N.Y.)
Publication Year 1995-
ISBN/ISSN 1355-8382
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