Subject: Re: Liang anon-EST's ... See attached file for Lang EST cleanup. File as a pc and do the merges needed. For those that are not in genome or are plasmid vector I suggest add a note and these must be status_uncertain Q's to me Michael Executive summary; anon- EST:Liang-1.11 == CG9022? anon- EST:Liang-1.13 = CG11798 anon- EST:Liang-1.16 = CG31738 anon- EST:Liang-1.18 == CG11107 anon- EST:Liang-1.21 == CG5931 anon- EST:Liang-1.24 = CG32743 anon- EST:Liang-1.25 = CG11525 anon- EST:Liang-1.3 = ? something new ? anon- EST:Liang-1.34 = ? something new ? anon- EST:Liang-1.38 == something new ? anon- EST:Liang-1.39 = no sequence data available anon- EST:Liang-1.4 = CG7977 anon- EST:Liang-1.40 == ? not in genome anon- EST:Liang-1.43 = CG5720 anon- EST:Liang-1.52 = CG3998 anon- EST:Liang-1.53 = looks like bacterial plasmid seq to me anon- EST:Liang-1.56 = CG7808 anon- EST:Liang-1.62 no sequence data available anon- EST:Liang-1.66 = CG4978 anon- EST:Liang-1.72 = CG12011 anon- EST:Liang-1.74 = CG14938 anon- EST:Liang-1.75 = CG5481 anon- EST:Liang-1.76 = CG31363 anon- EST:Liang-1.79 = CG5395 anon- EST:Liang-1.80 == CG14996 anon- EST:Liang-1.83 = CG7055 anon- EST:Liang-2.1 no sequence data available anon- EST:Liang-2.12 = CG17841 anon- EST:Liang-2.13 = ? on hth intron ? anon- EST:Liang-2.14 = sd? anon- EST:Liang-2.15 == CG15100 anon- EST:Liang-2.16 = CG4602? match bad, but note n's in query seq >anon- EST:Liang-2.19 = CG32177 anon- EST:Liang-2.2 = CG15154 anon- EST:Liang-2.23 = roo element anon- EST:Liang-2.24 == CG11525 anon- EST:Liang-2.28 = CG2210 anon- EST:Liang-2.31 = not in genome anon- EST:Liang-2.39 = in how intron ? anon- EST:Liang-2.40 = no sequence data available anon- EST:Liang-2.41 = CG32662 anon- EST:Liang-2.42 = CG5014 anon- EST:Liang-2.47 = CG1499 anon- EST:Liang-2.48 = CG14938 anon- EST:Liang-2.49 = CG3821 anon- EST:Liang-2.51 == CG7533 (charybde) (1-635 only; chimeric? Last anon- EST:Liang-2.54 == CG9894 anon- EST:Liang-20 == CG10035 anon- EST:Liang-38 == CG17579 (sca) anon- EST:Liang-97 == CG3359 (1-468 only; chimeric cDNA? Last 300bp not identifiable \-- het?) Michael \# 1. Blast at FB vs Predicted genes NT 2. If no: Blast at FB vs euchromatic and heterochromatic scaffolds NT 2. Blast Drosophila TE's at FB 4. If no Blast at FB all Drosophila NT 5. Blastn at NCBI \# anon- EST:Liang-1.11 == CG9022? >anon- EST:Liang-1.11 aaaantggnc ataatggtng tgnantangc atagagcggt gtgttnnata agntggnngg taatcngaac ntngtngagt ntattatnaa ntgggtattt ggngagantg gtntnttgnn nnnggcatnn gtgtaagatt ataaggaggg gganntgntg ttacgggata aggnn Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003446 |gb|AE003446| arm:X 8788012..9078081 estimated- cyto:8C4-8E1 gadfly- seqname:AE003446 seq_release:3 Length = 290070 Score = 81.4 bits (42), Expect = 6e-15 Genome Map Identities = 107/154 (69%) Strand = Plus / Minus Query: 20 gtgnantangcatagagcggtgtgttnnataagntggnnggtaatcngaacntngtngag 79 ||| | || ||| ||||||||||||| | ||| ||| ||||||| || | | ||| Sbjct: 108565 gtgcagtacgcacagagcggtgtgttccacaagctggccggtaatcgcgacgtggccgag 108506 Query: 80 tntattatnaantgggtatttggngagantggtntnttgnnnnnggcatnngtgtaagat 139 | |||| || ||||||||||| |||| ||| ||| ||||| ||| || || Sbjct: 108505 tccattagcaagtgggtatttggagagactggccgcttgcgcgtggcatccgtgcaacat 108446 Query: 140 tataaggaggggganntgntgttacgggataagg 173 | |||||||| || || || || |||| ||| Sbjct: 108445 cacaaggagggcgagctgctgccaccggatcagg 108412 BLAST against: Database: dmel_all_transcript_r320 >CG9022-RA type=mRNA; loc= X:complement (8895906..8897199,8897274..8897495); Genome Map ID=Ost48-RA; name=Ost48-RA; db_xref='CG9022,FlyBase:FBgn0014868'; len=1516 Length = 1516 Score = 81.4 bits (42), Expect = 2e-15 Identities = 107/154 (69%) Strand = Plus / Plus Query: 20 gtgnantangcatagagcggtgtgttnnataagntggnnggtaatcngaacntngtngag 79 ||| | || ||| ||||||||||||| | ||| ||| ||||||| || | | ||| Sbjct: 846 gtgcagtacgcacagagcggtgtgttccacaagctggccggtaatcgcgacgtggccgag 905 Query: 80 tntattatnaantgggtatttggngagantggtntnttgnnnnnggcatnngtgtaagat 139 | |||| || ||||||||||| |||| ||| ||| ||||| ||| || || Sbjct: 906 tccattagcaagtgggtatttggagagactggccgcttgcgcgtggcatccgtgcaacat 965 Query: 140 tataaggaggggganntgntgttacgggataagg 173 | |||||||| || || || || |||| ||| Sbjct: 966 cacaaggagggcgagctgctgccaccggatcagg 999 Database: na_all.dros >BACR19P22-T7 (STS) made from BACR19P22 Length = 809 Score = 81.4 bits (42), Expect = 3e-14 Identities = 107/154 (69%) Strand = Plus / Plus Query: 20 gtgnantangcatagagcggtgtgttnnataagntggnnggtaatcngaacntngtngag 79 ||| | || ||| ||||||||||||| | ||| ||| ||||||| || | | ||| Sbjct: 476 gtgcagtacgcacagagcggtgtgttccacaagctggccggtaatcgcgacgtggccgag 535 Query: 80 tntattatnaantgggtatttggngagantggtntnttgnnnnnggcatnngtgtaagat 139 | |||| || ||||||||||| |||| ||| ||| ||||| ||| || || Sbjct: 536 ttcattagcaagtgggtatttggagagactggccgcttgcgcgtggcatccgtgcaacat 595 Query: 140 tataaggaggggganntgntgttacgggataagg 173 | |||||||| || || || || |||| ||| Sbjct: 596 cacaaggagggcgagctgctgccaccggatcagg 629 \# anon- EST:Liang-1.13 = CG11798 >anon- EST:Liang-1.13 aaaagcttgc ttgttctttt tgcagaagct cagaataaac gctcaacttt gggacctgca cccccccccc cccccctcga tcgctcggca gcgcccagca ttgaatacga gtccagtgcg gccggtgcct ctggcaacaa cttggccacc acccaggcca atgtaatcca caacaacagc agcagcaaca gcaagcggag tcgggcaact ccgtggtggt gacggccaca gtggggcgac tgtggtgccg gcacccagtg tatcggccgt tggtggcttc aagtccgagg atcatctgag cactgccttc gggctggcag ccctgatgca aacggtttcg caccggccag gcgggtctgc tgaaaccggc gagcaacaaa gcgctgggct caggacggat ctggtctggt ggcgccgcac cggcggaacc acaactcgtg cagtggactc gggcggaaag ctccaagcta cgctcatgtc aaccaacacg cacactaata acccgcatag acatccaatc aaaaaacacc taggaacatg cggctgaatt gattaccacc ccccacatcg ggcaatgcgg gccaaaatct tggcccaaat ccatatccac cttagcgccc atgtaatatg cgttgggggc tcacactcct ccggtggaaa gaagggtccg aaaaggccct accgttttcc gcc Database: dmel_all_transcript_r320 >CG11798-RA type=mRNA; loc= 2R:join (10192641..10192910,10201827..10202161, 10202234..10202706,10202804..10203820, 10205562..10208508); ID=CG11798-RA; name=CG11798-RA; db_xref='CG11798,FlyBase:FBgn0033992'; len=5042 Length = 5042 Genome Map Score = 642 bits (334), Expect = 0.0 Identities = 407/421 (96%), Gaps = 9/421 (2%) Strand = Plus / Plus Query: 77 tcgatcgctcggcagcgcccagcattgaatacgagtccagtgcggccggtgcctctggca 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 tcgatcgctcggcagcgcccagcattgaatacgagtccagtgcggccggtgcctctggca 672 Query: 137 acaacttggccaccacccaggccaatgtaatcca-caacaacagcagcagcaacagcaag 195 ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 673 acaacgtggccaccacccaggccaatgtaatccagcaacaacaacagcagcaacagcaag 732 Query: 196 cggagtcgggcaactccgtggtggtgacggcca-cagtggggcgactgtggtgccggcac 254 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 733 cggagtcgggcaactccgtggtggtgacggccagcagtggggcgactgtggtgccggcac 792 Query: 255 ccagtgtatcggccgttggtggcttcaagtccgaggatcatctgagcactgccttcgggc 314 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 ccagtgtagcggccgttggtggcttcaagtccgaggatcatctgagcactgccttcgggc 852 Query: 315 tggcagccctgatgca-aacggtttcgca-ccggccaggcgggtctgctgaaa-ccggcg 371 |||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 853 tggcagccctgatgcagaacggtttcgcagccggccaggcgggtctgctgaaagccggcg 912 Query: 372 agcaacaa-agcgctgggctcaggacggatctggtctggtggc-gccgcaccggcggaac 429 |||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 913 agcagcaacagcgctgggctcaggacggatctggtctggtggcggccgcagcggcggaac 972 Query: 430 cacaactcgtgcagtgga-ctcgggcggaaagctcca-agctacgctcatgtcaaccaac 487 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 973 cacaactcgtgcagtggacctcgggcggaaagctccagagctacgctcatgtcaaccaac 1032 Query: 488 a 488 | Sbjct: 1033 a 1033 \# anon- EST:Liang-1.16 = CG31738 >anon- EST:Liang-1.16 agcagttcca gttccctaaa actgggctgg gagcggcggg ctcaagatgg tgacttcctg ctgcaactac aagatgcaga aacaggtcat ggtttcctca atacctacaa gggtacagag ctgcaaacgg agtgcctgca attaaggcgg gctagcagct accaattccg tctgagatcc gaaaacgaag ccggtttttc accctggtca ccggaggtta gctaccgcac tttagcggaa cgcccgggaa ggccagggaa accgcatgcc aagggaaaga ttcatggcac tcagtttaag gcccgctggg atgcacccag cgattccggt ggtgctgaga tcctgtgcta ccacttggag ttaagtgccg ctgggccaac tttcgaaagg atctacagtg gcgccgaaac agaagccatg tgcgaaagac ttcagccggg taccacatac gctctgcgag cctgttgcga angtccaagc tggtcagagt ccgtactccg atataggaca agtcaccacn gaaggcggtg ccaccaatct gctcccgcct ccaaccgcaa ttgcagtgat cctccctcgc cgtacgccgc ccctactgaa gctccggggc tcccggaata taaacngtng nngctccnga ttttaaaagt ttgnagcccc aaaatccgtt cncctaanag cnaagttgcn agccngcccg cantttgggt ttaccgccgg naaagcanaa cctanctttg ttggcccaag gatnttgaaa accc Database: dmel_all_transcript_r320 >CG31738-RA type=mRNA; loc= 2L:join (16635199..16635513,16635583..16636036, 16636108..16640110); ID=CG31738-RA; name=CG31738-RA; db_xref='CG31738,FlyBase:FBgn0051738'; len=4772 Length = 4772 Genome Map Score = 1040 bits (541), Expect = 0.0 Identities = 596/607 (98%), Gaps = 7/607 (1%) Strand = Plus / Plus Query: 1 agcagttccagttccctaaaactgggctgggagcggcgggctcaagatggtgacttcctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 agcagttccagttccctaaaactgggctgggagcggcgggctcaagatggtgacttcctg 1806 Query: 61 ctgcaactacaagatgcagaaacaggtcatggtttcctcaatacctacaagggtacagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1807 ctgcaactacaagatgcagaaacaggtcatggtttcctcaatacctacaagggtacagag 1866 Query: 121 ctgcaaacggagtgcctgcaattaaggcgggctagcagctaccaattccgtctgagatcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1867 ctgcaaacggagtgcctgcaattaaggcgggctagcagctaccaattccgtctgagatcc 1926 Query: 181 gaaaacgaagccggtttttcaccctggtcaccggaggttagctaccgcactttagcggaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1927 gaaaacgaagccggtttttcaccctggtcaccggaggttagctaccgcactttagcggaa 1986 Query: 241 cgcccgggaaggccagggaaaccgcatgccaagggaaagattcatggcactcagtttaag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1987 cgcccgggaaggccagggaaaccgcatgccaagggaaagattcatggcactcagtttaag 2046 Query: 301 gcccgctgggatgcacccagcgattccggtggtgctgagatcctgtgctaccacttggag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2047 gcccgctgggatgcacccagcgattccggtggtgctgagatcctgtgctaccacttggag 2106 Query: 361 ttaagtgccgctgggccaactttcgaaaggatctacagtggcgccgaaacagaagccatg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2107 ttaagtgccgctgggccagctttcgaaaggatctacagtggcgccgaaacagaagccatg 2166 Query: 421 tgcgaaagacttcagccgggtaccacatacgctctgcgagcctgttgcgaangtccaagc 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 2167 tgcgaaagacttcagccgggtaccacatacgctctgcgagcctgttgcgaaggtcc-agc 2225 Query: 481 tggtcagagtccgtactccgatataggacaagtcaccacngaaggcggtgccaccaatct 540 |||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||| Sbjct: 2226 tggtcagagtccgtactccgatataggacacgtcaccacgg-aggcggtgccacc-atct 2283 Query: 541 gctcccgcctccaaccgcaattgcagtgatcctccctcgccgtacgccgcccctactgaa 600 ||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 2284 gct-ccgcctcc-accgc-attgcagtgatcctccctcgccgtacgccg-ccctactgaa 2339 Query: 601 gctccgg 607 ||||||| Sbjct: 2340 gctccgg 2346 \# anon- EST:Liang-1.18 == CG11107 \# anon- EST:Liang-1.21 == CG5931 \# anon- EST:Liang-1.24 = CG32743 >anon- EST:Liang-1.24 aaagtacaga caaactgacg gacacggatt tgctgtggac cggaagccgt tggatcgtgg catatgccac gtgctctctc ggatcgcaat ccgcattttg aattccgagt ggacataacg agttgctggc cgagtagcag cagatgcagc ggctgacaca gcctcctata gctcccgatg taagagatct gggctcgatg acgttatcgg atacgatata ttccaggttt tagatacaaa attttcgttt accggccctc cgttatattt cctttttttt ttttaaaatg ctgttgtgca acttttccta tacgattcga ttataaacta tatattaatt tacaccatac cggaagtgtt ttttttttat tacgtgttaa gccactctca gtttcagccg ccttccccca ctcccctcta aaaccaaatc tgtagccgca ttagaactat atgtacaacc caatatatat atatatatat atatatatat gtatatgtat atccgcgatg cccgttcata gccgatgtcg gctatgcccg cccgttctcg ttttagttat ttcaataaac acaatgctga atataaatat aaatgttcgt ttccttcgag tgtaagtgag ctaanaactt tttgtgggaa taaaatcact cattttaatt ttctaaaagt tcaanccccg aattgcgcat cccgtttttt actt CG32743-RA type=mRNA; loc= X:join (6565014..6565362,6565432..6565795, 6565866..6568125,6568194..6571694,6574241..6574560, 6574626..6575970,6576021..6576989,6577057..6577405, 6577477..6578626); ID=Smg1-RA; name=Smg1-RA; db_xref='CG32743,FlyBase:FBgn0052743'; len=10607 Length = 10607 Genome Map Score = 756 bits (393), Expect = 0.0 Identities = 434/463 (93%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 1 aaagtacagacaaactgacggacacggatttgctgtggaccggaagccgttggatcgtgg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9918 aaagtacagacagactgacggacacggatttgctgtggaccggaagccgttggatcgtgg 9977 Query: 61 catatgccacgtgctctctcggatcgcaatccgcattttgaattccgagtggacataacg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9978 catatgccacgtgctctctcggatcgcaatccgcattttgaattccgagtggacataacg 10037 Query: 121 agttgctggccgagtagcagcagatgcagcggctgacacagcctcctatagctcccgatg 180 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10038 agttgctggccgagtagcagcagatgcagcggcttacacagcctcctatagctcccgatg 10097 Query: 181 taagagatctgggctcgatgacgttatcggatacgatatattccaggttttagatacaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10098 taagagatctgggctcgatgacgttatcggatacgatatattccaggttttagatacaaa 10157 Query: 241 attttcgtttaccggccctccgttatattt-ccnnnnnnnnnnnnaaaatgctgttgtgc 299 |||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 10158 attttcgtttaccggccctccgttttatttccctttttttttttttaaatgctgttgtgc 10217 Query: 300 aacttttcctatacgattcgattataaactatatattaatttacaccataccggaagtgn 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10218 aacttttcctatacgattcgattataaactatatattaatttacaccatactggaagtgt 10277 Query: 360 nnnnnnnnnattacgtgttaagccactctcagtttcagccgccttcccccactcccctct 419 |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10278 tttttttttattacgtgttaagccactcttagtttcagccgccttcccccactcccctct 10337 Query: 420 aaaaccaaatctgtagccgcattagaactatatgtacaaccca 462 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10338 aaaaccaaatctgtagccgcattagaactatatgtacaaccca 10380 \# anon- EST:Liang-1.25 = CG11525 >anon- EST:Liang-1.25 gagggccggt atgggacacc gggtgctgct ggcttggaat atcagaagta cgaacaacaa caacaactgg aggatctggc ggagtccgag gcaggagccg tcggtggagc cagcaacaac aacggcgaat cgtcgtcgtc cttgaaaaag ctagaggatc agctgcacgc cctcacctcg gacgagttgt acgaaaccct caaggagtac gacgtcctgc aggacaagtt ccacacggtg ctgctgttgc ccaaggaatc aaggcgtgag gttactgccg gaggacgaga tggatccgcc tacgtgctgc gctgcctgaa gatgtggtac gagctgccct ccgacgtcct gttctcggcc atgagcctgg tggaccgctt cctggatcgc atggccgtca agccgaagca catggcctgc atgagcgtgg cctcgttcca cttggccatc aagcagctgg acttgaaacc cattcccgcc gaggatctgg ttacaatatc tcantgtggt tgtaccgctg gtgatctgga acgcaaggcc ggcgtngatt gccaacaaan ctgggcgttc aagatgggac atgcaccgat taacntctgt gagctacctg gcgcatctac taangcccct cttccgcaaa ctttggncga aaggannatt tggggggnga acttttttaa agnttctaac aaacaa Database: dmel_all_transcript_r320 >CG11525-RD type=mRNA; loc= 3R:complement (27413538..27414436,27415477..27415691, 27415762..27416136,27416200..27416439,27416504..27417318, 27427399..27427752); ID=CycG-RD; name=CycG-RD; db_xref='CG11525,FlyBase:FBgn0039858'; len=2898 Length = 2898 Genome Map Score = 1092 bits (568), Expect = 0.0 Identities = 624/639 (97%), Gaps = 7/639 (1%) Strand = Plus / Plus Query: 1 gagggccggtatgggacaccgggtgctgctggcttggaatatcagaagtacgaacaacaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 gagggccggtatgggacaccgggtgctgctggcttggaatatcagaagtacgaacaacaa 965 Query: 61 caacaactggaggatctggcggagtccgaggcaggagccgtcggtggagccagcaacaac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 caacaactggaggatctggcggagtccgaggcaggagccgtcggtggagccagcaacaac 1025 Query: 121 aacggcgaatcgtcgtcgtccttgaaaaagctagaggatcagctgcacgccctcacctcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1026 aacggcgaatcgtcgtcgtccttgaaaaagctagaggatcagctgcacgccctcacctcg 1085 Query: 181 gacgagttgtacgaaaccctcaaggagtacgacgtcctgcaggacaagttccacacggtg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1086 gacgagttgtacgaaaccctcaaggagtacgacgtcctgcaggacaagttccacacggtg 1145 Query: 241 ctgctgttgcccaaggaatcaaggcgtgaggttactgccggaggacgagatggatccgcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1146 ctgctgttgcccaaggaatcaaggcgtgaggttactgccggaggacgagatggatccgcc 1205 Query: 301 tacgtgctgcgctgcctgaagatgtggtacgagctgccctccgacgtcctgttctcggcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1206 tacgtgctgcgctgcctgaagatgtggtacgagctgccctccgacgtcctgttctcggcc 1265 Query: 361 atgagcctggtggaccgcttcctggatcgcatggccgtcaagccgaagcacatggcctgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1266 atgagcctggtggaccgcttcctggatcgcatggccgtcaagccgaagcacatggcctgc 1325 Query: 421 atgagcgtggcctcgttccacttggccatcaagcagctggacttgaaacccattcccgcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 atgagcgtggcctcgttccacttggccatcaagcagctggacttgaaacccattcccgcc 1385 Query: 481 gaggatctggttacaatatctcantgtggttgtaccgctggtgatctggaacgcaaggcc 540 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 1386 gaggatctggttacaatatctcagtgtggttgtaccgctggtgatctggaacgcatggcc 1445 Query: 541 ggcgtngattgccaacaaanctgggcgttcaagatgggacatgcaccgattaacntctgt 600 ||||| |||||||||| || ||||||| || |||||||||||||||||| | || ||||| Sbjct: 1446 ggcgt-gattgccaac-aagctgggcg-tccagatgggacatgcaccga-tcacttctgt 1501 Query: 601 gagctacctggcgcatctactaangcccctcttccgcaa 639 ||||||||| |||||||||||| ||||||||||||| Sbjct: 1502 gagctacct-gcgcatctactacg--ccctcttccgcaa 1537 \# anon- EST:Liang-1.3 = ? something new ? >anon- EST:Liang-1.3 attagcctgc gagcaggcaa cagatggcac atcacatgca atccacatac ccccatacca aaccatacca ttccatacta taccatcctc caatcctccg atcctccgat cttgcaatct tggtgaactt gagcgcattg cgatgtgctc atatatttct tgctgctcgt tgaggatgat gggaaaactc gtttttcgtt gcattcttcg gccggcgtca tcgatgatgc tgataatgat aatgataatg acaatgataa taatgatgat aatattaaag aggttccatt ggcataagtc cggctcgatg atgatcgcga tttgccttgg cacaacgcaa tgccaaagtt gttgtgccgg ttgttgcctt ccagctccta tatatatata catacagata tactatgtac atatgttttt tcttttattt tctttgtccg gggcactctt gtctcccggg ttccgttcta cagacgacct taaggagggg gtcttgggag gccagtcggg agactggagc aaaccacatt tcgtattccg tanacctggc gaaatattcg atnacatgcg attttcaaca accagaggac attgtttcta ttgaaatata ataaaataag taaatatggt atgtaacang aaaaagttta agctttgatg attgttttgt tacaanagag cacgtcttaa gaagttttta ttcaaggcaa aangacaaat gagggccttt tttttttttt c Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003490 |gb|AE003490| arm:X 12354616..12657280 estimated- cyto:11B5-11D3 gadfly- seqname:AE003490 seq_release:3 Length = 302665 Score = 431 bits (224), Expect = e-119 Genome Map Identities = 224/224 (100%) Strand = Plus / Minus Query: 1 attagcctgcgagcaggcaacagatggcacatcacatgcaatccacatacccccatacca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268279 attagcctgcgagcaggcaacagatggcacatcacatgcaatccacatacccccatacca 268220 Query: 61 aaccataccattccatactataccatcctccaatcctccgatcctccgatcttgcaatct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268219 aaccataccattccatactataccatcctccaatcctccgatcctccgatcttgcaatct 268160 Query: 121 tggtgaacttgagcgcattgcgatgtgctcatatatttcttgctgctcgttgaggatgat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268159 tggtgaacttgagcgcattgcgatgtgctcatatatttcttgctgctcgttgaggatgat 268100 Query: 181 gggaaaactcgtttttcgttgcattcttcggccggcgtcatcga 224 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268099 gggaaaactcgtttttcgttgcattcttcggccggcgtcatcga 268056 Score = 394 bits (205), Expect = e-108 Genome Map Identities = 258/271 (95%), Gaps = 7/271 (2%) Strand = Plus / Minus Query: 436 gtccggggcactcttgtctcccgggttccgttctacagacgaccttaaggagggggtctt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267838 gtccggggcactcttgtctcccgggttccgttctacagacgaccttaaggagggggtctt 267779 Query: 496 gggaggccagtcgggagactggagcaaaccacatttcgtattccgtanacctggcgaaat 555 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 267778 gggaggccagtcgggagactggagcaaaccacatttcgtattccgtacacctggcgaaat 267719 Query: 556 attcgatnacatgcgattttcaacaaccagaggacattgtttctattgaaatataataaa 615 ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 267718 attcgatcacatgcgattttcaacaagcaga-gacattgtttctattgaaatataataaa 267660 Query: 616 ataagtaaatatggtatgtaacangaaaaagtttaagctttgatgattgttttgttacaa 675 |||||||||||| |||||||||| |||||| | |||||||||||||||||||| |||| Sbjct: 267659 ataagtaaatat-gtatgtaacag--aaaagtat-agctttgatgattgttttgtaacaa 267604 Query: 676 nagagcacgtcttaagaagtttttattcaag 706 ||||||||||||||| |||||||||||||| Sbjct: 267603 \-agagcacgtcttaag-agtttttattcaag 267575 Score = 198 bits (103), Expect = 1e-49 Genome Map Identities = 103/103 (100%) Strand = Plus / Minus Query: 275 ttaaagaggttccattggcataagtccggctcgatgatgatcgcgatttgccttggcaca 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267999 ttaaagaggttccattggcataagtccggctcgatgatgatcgcgatttgccttggcaca 267940 Query: 335 acgcaatgccaaagttgttgtgccggttgttgccttccagctc 377 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267939 acgcaatgccaaagttgttgtgccggttgttgccttccagctc 267897 \# anon- EST:Liang-1.34 = ? something new ? >anon- EST:Liang-1.34 aaaacaaaac aaaacaaaaa cgacaaagca taaaaactgt atgttggttc ttttattata ttatacttta tttctataaa tattattgta attgtactgt gtattatgat tttgctaacc aaaatccctt agtatgagat gctcatcgat atttcacccc catacacaaa atcaaatcaa ttcgaaccaa aaagaatact cggccatcca aacgaacaaa atttaccatt tattttgtac gcaattgtaa ctacttttat atgtatgtac atatgtatgt acattctcta ttttggtacg tccactgaaa caaaattata gtacgcctca tttgattttt caactgtctt gtgtttcata cgatttaatt taatgatatt gattatgcaa atatatatat aaatataaac atcatttcta ttgtaattaa aatgctgcag acaacaaaga cgaacgacaa aaactcatag aaaacacaan aaaaacatct gaggagaagc cggagcggaa gaactggaaa gaattctccg cggggagggt cactaccccc ctcgcgttct cctactccaa cactttctcc ctttacatcc aanttgggct tccgtttaat cacgggattc ctcgggtgtt taattggttt tccctttttt tccncgccaa ctttctcata aaaatcaaan gaatcaatca tcaagnccgc agatgggaga ag Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003527 |gb|AE003527| arm:3L 16253079..16532982 estimated- cyto:72E1-73A10 gadfly- seqname:AE003527 seq_release:3 Length = 279904 Score = 987 bits (513), Expect = 0.0 Genome Map Identities = 564/589 (95%), Gaps = 4/589 (0%) Strand = Plus / Minus Query: 37 ctgtatgttggttcttttattatattatactttatttctataaatattattgtaattgta 96 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99748 ctgtatgttggttcttttattatattatactttatttctataaatattattgtaattgta 99689 Query: 97 ctgtgtattatgattttgctaaccaaaatcccttagtatgagatgctcatcgatatttca 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99688 ctgtgtattatgattttgctaaccaaaatcccttagtatgagatgctcatcgatatttca 99629 Query: 157 cccccatacacaaaatcaaatcaattcgaaccaaaaagaatactcggccatccaaacgaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99628 cccccatacacaaaatcaaatcaattcgaaccaaaaagaatactcggccatccaaacgaa 99569 Query: 217 caaaatttaccatttattttgtacgcaattgtaactacttttatatgtatgtacatatgt 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99568 caaaatttaccatttattttgtacgcaattgtaactacttttatatgtatgtacatatgt 99509 Query: 277 atgtacattctctattttggtacgtccactgaaacaaaattatagtacgcctcatttgat 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99508 atgtacattctctattttggtacgtccactgaaacaaaattatagtacgcctcatttgat 99449 Query: 337 ttttcaactgtcttgtgtttcatacgatttaatttaatgatattgattatgcaannnnnn 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99448 ttttcaactgtcttgtgtttcatacgatttaatttaatgatattgattatgcaaatatat 99389 Query: 397 nnnnnnnnnnnaacatcatttctattgtaattaaaatgctgcagacaacaaagacgaacg 456 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99388 atataaatataaacatcatttctattgtaattaaaatgctgcagacaacaaagacgaacg 99329 Query: 457 acaaaaactcatagaaaacacaanaaaaacatctgaggagaagccggagcggaagaactg 516 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99328 acaaaaactcatagaaaacacaaaaaaaacatctgaggagaagccggagcggaagaactg 99269 Query: 517 gaaagaattctccgcggggagggtcactacccccctcgcgttctcctactccaacacttt 576 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99268 g-aagaattctccgcgggga-ggtcactacccccctcgcgttctcctactccaacacttt 99211 Query: 577 ctccctttacatccaanttgggcttccgtttaatcacgggattcctcgg 625 |||||||||||||| | |||| |||||||||| |||| ||||||||||| Sbjct: 99210 ctccctttacatcc-agttggccttccgtttattcac-ggattcctcgg 99164 \# anon- EST:Liang-1.38 == something new ? >anon- EST:Liang-1.38 aataactttt acaaaataca taccaaaaat acttaattaa atgcaagcag gtattttttc aaataaaccg aatattccaa aaacacgttg cccaaataca cctacgatta attctaaagc aaacaaaatg ctcatataca cgtagctact aatgtaataa aaagaacact aaacgaatcc aaaacttaaa tcaggtattc acattttttt cgtattactt agactaagat aaagcgagtc ggcgagccgc cagcctgact aaatgactaa aatcatcgtg agatgatttc aaagattttt caaagatata aggaggatgt aaggaggagc gagcgttgca agacccacat atgtaactat ttactaagcc acgttttata acaaacataa caacaaatcg atcgacgatg ctaaagcaaa cggaatgaac tcttatcaaa atacaatttt gngtaatact tttaaaacga caaatgcaaa naacaganng aaaaaaanaa acgaatgctg cggccgccga attccggtct ccctanagtg agtcgtantt aatttcgata agccaagctg cattaangaa atcgggncaa ngcgcggggg anaggcggtt tgcgtnattg gggcgctctt ccggnttnct ngctcantnn gactncnctg cngcttnggt cgttngggct ggcggggaag c Database: dmel_all_scaffolds_r310 gadfly| SEG:AE003841 |gb|AE003841| arm:2R 2310945..2577370 estimated- cyto:43A2-43D3 gadfly- seqname:AE003841 seq_release:3 Length = 266426 Score = 898 bits (467), Expect = 0.0 Genome Map Identities = 476/485 (98%) Strand = Plus / Minus Query: 1 aataacttttacaaaatacataccaaaaatacttaattaaatgcaagcaggtattttttc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230552 aataacttttacaaaatacataccaaaaatacttaattaaatgcaagcaggtattttttc 230493 Query: 61 aaataaaccgaatattccaaaaacacgttgcccaaatacacctacgattaattctaaagc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230492 aaataaaccgaatattccaaaaacacgttgcccaaatacacctacgattaattctaaagc 230433 Query: 121 aaacaaaatgctcatatacacgtagctactaatgtaataaaaagaacactaaacgaatcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230432 aaacaaaatgctcatatacacgtagctactaatgtaataaaaagaacactaaacgaatcc 230373 Query: 181 aaaacttaaatcaggtattcacannnnnnncgtattacttagactaagataaagcgagtc 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 230372 aaaacttaaatcaggtattcacatttttttcgtattacttagactaagataaagcgagtc 230313 Query: 241 ggcgagccgccagcctgactaaatgactaaaatcatcgtgagatgatttcaaagattttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230312 ggcgagccgccagcctgactaaatgactaaaatcatcgtgagatgatttcaaagattttt 230253 Query: 301 caaagatataaggaggatgtaaggaggagcgagcgttgcaagacccacatatgtaactat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230252 caaagatataaggaggatgtaaggaggagcgagcgttgcaagacccacatatgtaactat 230193 Query: 361 ttactaagccacgttttataacaaacataacaacaaatcgatcgacgatgctaaagcaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230192 ttactaagccacgttttataacaaacataacaacaaatcgatcgacgatgctaaagcaaa 230133 Query: 421 cggaatgaactcttatcaaaatacaattttgngtaatacttttaaaacgacaaatgcaaa 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 230132 cggaatgaactcttatcaaaatacaattttgagtaatacttttaaaacgacaaatgcaaa 230073 Query: 481 naaca 485 |||| Sbjct: 230072 aaaca 230068 \# anon- EST:Liang-1.39 = no sequence data available \# anon- EST:Liang-1.4 = CG7977 >anon- EST:Liang-1.4 ttttcatttc tttttctcnt aaaaatgnca cccaaaaagc caaccgaaaa atccgccaag cctggcnaca anaacccata gcagaanaag actgctgngg ctcccgctgc cggcaagaan gaggctgctc cctcggntgc caantcanct gccgctgcgc ccaagaaggc tgctgcccca gcggctaata aggctgctcc ggncgccaaa aanccagcga ccgcnggtgc tgcngccaat aagcccgcng ccgtnaagan gancgcggtc gccaaggcca atagcaagga tgccaaganc aaggtcctcn ccggcaanaa nccccagtcc gtgctggcca anctctctgc caaggctcgc gcggccgtca angccaaaaa cggcgttaag cccgtgacca agcccnccaa gggaacngcn aaggccaagg ntgtggctct gctgaacgcc aagaangtcc agaagaagat atcaanggcn ccttcngnac ccntgcccgc aagatncgca ccaacgtgca cttccgtcgg taaccaccct gaagctgccc atggagtccc aagtacccca agnaaatcgg tgcccaccan gntaaccgca tggaccgcgt taacatcatc aaagtaccac tgga Database: dmel_all_transcript_r320 >CG7977-RA type=mRNA; loc= 3L:complement (1647819..1648364,1648438..1648850, 1649225..1649306); ID=RpL23a-RA; name=RpL23a-RA; db_xref='CG7977,FlyBase:FBgn0026372'; len=1041 Length = 1041 Genome Map Score = 850 bits (442), Expect = 0.0 Identities = 548/607 (90%), Gaps = 6/607 (0%) Strand = Plus / Plus Query: 1 ttttcatttctttttctcntaaaaatgncacccaaaaagccaaccgaaaaatccgccaag 60 |||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||||| Sbjct: 28 ttttcatttctttttctcgtagaaatgccacccaaaaagccaaccgagaaatccgccaag 87 Query: 61 cctggcnacaanaacccatagcagaanaagactgctgnggctcccgctgccggcaagaan 120 |||||| |||| || ||| ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 88 cctggcgacaagaagccagagcagaagaagactgctgcggctcccgctgccggcaagaag 147 Query: 121 gaggctgctccctcggntgccaantcanctgccgctgcgcccaagaaggctgctgcccca 180 |||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| Sbjct: 148 gaggctgctccctcggctgccaagccagctgccgctgcgcccaagaaggctgctgcccca 207 Query: 181 gcggctaataaggctgctccggncgccaaaaanccagcgaccgcnggtgctgcngccaat 240 |||||||| ||||||||||||| |||||| || ||||||||||| |||||||| ||||| Sbjct: 208 gcggctaagaaggctgctccggccgccaagaagccagcgaccgccggtgctgctgccaag 267 Query: 241 aagcccgcngccgtnaagangancgcggtcgccaaggccaatagcaaggatgccaaganc 300 |||||||| ||||| |||| || ||||| |||||||||||| |||||||||||||||| Sbjct: 268 aagcccgcggccgtaaagacgaccgcggccgccaaggccaagagcaaggatgccaagaag 327 Query: 301 aaggtcctcnccggcaanaanccccagtccgtgctggccaanctctctgccaaggctcgc 360 ||||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 328 aaggtcctcgccggcaagaagccccagtccgtgctggccaagctctctgccaaggctcgc 387 Query: 361 gcggccgtcaangccaaaaacggcgttaagcccgtgaccaagcccnccaagggaacngcn 420 ||||||| ||| ||||| || ||||| |||||||||||||||||| |||||||||| || Sbjct: 388 gcggccgccaaggccaagaagggcgtgaagcccgtgaccaagcccgccaagggaaccgcc 447 Query: 421 aaggccaaggntgtggctctgctgaacgccaagaangtccagaagaagat-atcaanggc 479 |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 448 aaggccaaggctgtggctctgctgaacgccaagaaggtccagaagaagatcatcaagggc 507 Query: 480 nccttcngnacccntgcccgcaagatncgcaccaacgtgcacttccgtcgg-taaccacc 538 ||||| | |||| |||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 508 gccttcggcacccgtgcccgcaagatccgcaccaacgtgcacttccgtcggccaaccacc 567 Query: 539 ctgaagctgcccatggagtcccaagtaccccaagnaaatcggtgcccaccangntaaccg 598 ||||||||||||| ||||||||||||||||| || |||||||||||||||| | ||||| Sbjct: 568 ctgaagctgccca-ggagtcccaagtacccc-aggaaatcggtgcccaccagg--aaccg 623 Query: 599 catggac 605 ||||||| Sbjct: 624 catggac 630 \# anon- EST:Liang-1.40 == ? not in genome >anon- EST:Liang-1.40 aaatntctnt nanatgggan tcgtttnatt cgnangnaan ggaattgg Database: na_all.dros 377,099 sequences; 626,972,236 total letters Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 2,262,611 sequences; 10,883,439,008 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs No significant similarity found. For reasons why, click here. \# anon- EST:Liang-1.43 = CG5720 >anon- EST:Liang-1.43 aaaagcgatg aatatgatga ggatctgttg aacttgagcg cgagggagga gtctgtagac caggagccag aagaggatcc cccgaaattg gaggctccac cacgaaaagc taagagcccc attattttta acagacgcga gaagacaccc gaaaagcgtc caaaggctga accggagatc gattcccgcc aggaggaggc ggaggagaag agccccaaaa aagattcttc ggctgacaag gccaaggaag accggtctga aaggcgatcg gtgcatgacc gtctcggttc aaagggccaa acgccggcag atcgttcgca acgcaaccaa aaggagctct atgtgccgac ccatcggcga cggagcgaac ccgaagccac caaagagcgc agtcaaagag agcgcacccg agaacgacgc tccagccgcg atactctaag gacactaacc gtaatcaacg ccancgtcgt tcgcctaatc cgggagggtc caagtacaaa agcaacgcat tgtctcccaa gttattgttg gccgtttaca agccaccgga gcccgtcgga cgatgaagga tttggccgaa aaaaccaant caactccgtt aataaaggnc aaacccanga ncaaatnttt ctcccaaaaa naanaggctg caagaaaact cctggtgcga acaatngggg gnngcncaaa ngtttcaaaa tnctcgncaa aganttntga cncaaaaagg ggggaccang gatttnggca aanattnana aattc Database: dmel_all_transcript_r320 >CG5720-RA type=mRNA; loc= 3R:complement (20131027..20131577,20131639..20131908, 20131971..20134220,20134275..20134500, 20134594..20134799); ID=CG5720-RA; name=CG5720-RA; db_xref='CG5720,FlyBase:FBgn0028471'; len=3503 Length = 3503 Genome Map Score = 975 bits (507), Expect = 0.0 Identities = 606/636 (95%), Gaps = 10/636 (1%) Strand = Plus / Plus Query: 2 aaagcgatgaatatgatgaggatctgttgaacttgagcgcgagggaggagtctgtagacc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 859 aaagcgatgaatatgatgaggatctgttgaacttgagcgcgagggaggagtctgtagacc 918 Query: 62 aggagccagaagaggatcccccgaaattggaggctccaccacgaaaagctaagagcccca 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 919 aggagccagaagaggatcccccgaaattggaggctccaccacgaaaagctaagagcccca 978 Query: 122 ttatttttaacagacgcgagaagacacccgaaaagcgtccaaaggctgaaccggagatcg 181 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 979 ttatttttaacagacgcgagaagacacccgaaaagcgtccagaggctgaaccggagatcg 1038 Query: 182 attcccgccaggaggaggcggaggagaagagccccaaaaaagattcttcggctgacaagg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 attcccgccaggaggaggcggaggagaagagccccaaaaaagattcttcggctgacaagg 1098 Query: 242 ccaaggaagaccggtctgaaaggcgatcggtgcatgaccgtctcggttcaaagggccaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1099 ccaaggaagaccggtctgaaaggcgatcggtgcatgaccgtctcggttcaaaggcccaaa 1158 Query: 302 cgccggcagatcgttcgcaacgcaaccaaaaggagctctatgtgccgacccatcggcgac 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1159 cgccggcagatcgttcgcagcgcaaccaaaaggagctctatgtgccgacccatcggcgac 1218 Query: 362 ggagcgaacccgaagccaccaaagagcgcagtcaaagagagcgcacccgagaacgacgct 421 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 ggagcgaacccgaggccaccaaagagcgcagtcaaagagagcgcacccgagaacgacgct 1278 Query: 422 ccagccgcgata-ctctaaggacactaaccgtaatcaacgccancgtcgttcgcctaatc 480 |||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||| || Sbjct: 1279 ccagccgcgatacctctagggacactaaccgtaatcagcgccagcgtcgttcgcctagtc 1338 Query: 481 cgggagggtccaagtacaaaagcaacgcattgtctcccaagttattgttggccgtttaca 540 | ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 1339 c-ggaggctccaagtac-aaagcaacgcattgtctcccaagttattg-tggccgttaaca 1395 Query: 541 agccaccggagcccgtcggacgatgaaggatttggccgaaaaaaccaantcaactccgtt 600 ||||||||||| ||||||||||||| ||||| |||||| |||| | | ||||||||||| Sbjct: 1396 agccaccggag-ccgtcggacgatg-aggatatggccg--aaaagccagtcaactccgtt 1451 Query: 601 aataaaggncaaacccangancaaatntttctccca 636 || |||| | || ||| || ||||| ||||||||| Sbjct: 1452 \-attaaggtc-aagccaagaccaaatgtttctccca 1485 \# anon- EST:Liang-1.52 = CG3998 >anon- EST:Liang-1.52 actcgccagc agcgcattgg cgttttttca ttttttaaag tgtacttaag agttgttaat atttttcgca gtgctcggcc cgaccacaac aaacaataat agccgaataa tagtgtgagt gaaaatgcgg cgagctgcat tcggcgcaaa accaagtgtt ccgcagcacc caaagcccaa atcgaacaac tcgaaatcgg aatcaggcga agccatcatt agcgagacat ttgtatttgt ctgacccctc aacggtgtct gagaatctcg gagagtcgtc gtggagcggt gtggagagga gagagcagga gcagaaaagg gcccacaatc caagtccaag gaagcaccac tccgatactg caccgatatg gaaaccgagt cgatggctcc aagcagcagt gcggcggctg cagccaccaa gctcctggtg gagatnacca ccgacgggaa taccaagctg cactgcccgg tgtgcaacaa agngctggtc tccctaaccg gatatgtgaa agcacgttaa ggaagcacca gccgncgggc ggnttcnagt tgccgtcact gcgatgctcc ggttttgcca cgaaggaggg agctnaccca gcnatgcaaa ggnatnanca agggggtcac tgggggccgg taactgggnc agggagccaa aagccntttc ntttgttaaa aaattgcggg cngggntana agttncaagg aggnataacc nttngccact ggaaggncca aatttttggn gaagga Database: dmel_all_transcript_r320 >CG3998-RA type=mRNA; loc= 2L:join (9750567..9750982,9751909..9752282, 9752350..9753728,9753794..9754606); ID=zf30C-RA; name=zf30C-RA; db_xref='CG3998,FlyBase:FBgn0022720'; len=2982 Length = 2982 Genome Map Score = 929 bits (483), Expect = 0.0 Identities = 574/612 (93%), Gaps = 7/612 (1%) Strand = Plus / Plus Query: 1 actcgccagcagcgcattggcgnnnnnnnnnnnnnnaaagtgtacttaagagttgttaat 60 ||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 46 actcgccagcagctcattggcgttttttcattttttaaagtgtacttaagagttgttaat 105 Query: 61 atttttcgcagtgctcggcccgaccacaacaaacaataatagccgaataatagtgtgagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 atttttcgcagtgctcggcccgaccacaacaaacaataatagccgaataatagtgtgagt 165 Query: 121 gaaaatgcggcgagctgcattcggcgcaaaaccaagtgttccgcagcacccaaagcccaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 gaaaatgcggcgagctgcattcggcgcaaaaccaagtgttccgcagcacccaaagcccaa 225 Query: 181 atcgaacaactcgaaatcggaatcaggcgaagccatcattagcgagacatttgtatttgt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 atcgaacaactcgaaatcggaatcaggcgaagccatcattagcgagacatttgtatttgt 285 Query: 241 ctgacccctcaacggtgtctgagaatctcggagagtcgtcgtggagcggtgtggagagga 300 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ctgacccctcagcggtgtctgagaatctcggagagtcgtcgtggagcggtgtggagagga 345 Query: 301 gagagcaggagcagaaaagggcccacaatccaagtccaaggaagcaccactccgatactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 346 gagagcaggagcagaaaagggcccacaatccaagtccaaggaagcaccactccgataccg 405 Query: 361 caccgatatggaaaccgagtcgatggctccaagcagcagtgcggcggctgcagccaccaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 aaccgatatggaaaccgagtcgatggctccaagcagcagtgcggcggctgcagccaccaa 465 Query: 421 gctcctggtggagatnaccaccgacgggaataccaagctgcactgcccggtgtgcaacaa 480 ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| Sbjct: 466 gctcctggtggagatcaccaccgacggaatacccaagctgcactgcccggtgtgcaacaa 525 Query: 481 agngctggtctccctaaccggatatgtgaaagcacgttaaggaagcaccagccgncgggc 540 | ||||||||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||| Sbjct: 526 ggcgctggtctccctagccggatatgtg-aagcacg-taaagaagcaccagccgccgggc 583 Query: 541 ggnttcnagttgccgtcactgcgatgctccggttttgccacgaaggagggagctnaccca 600 || ||| || |||||||||||||||||| ||||||||||||| |||| |||||| ||||| Sbjct: 584 ggcttcgag-tgccgtcactgcgatgct-cggttttgccacg-agga-ggagctcaccca 639 Query: 601 gcnatgcaaagg 612 || ||||||||| Sbjct: 640 gc-atgcaaagg 650 \# anon- EST:Liang-1.53 = looks like bacterial plasmid seq to me >anon- EST:Liang-1.53 aaaaaaaaaa aacgaatgct gcggccgccg aattccggtc tccctatagt gagtcgtatt aatttcgata agccagctgc attaatgaat cggccaacgc gcggggagag gcggtttgcg tattgggcgc tcttccgctt cctcgctcac tgactcgctg cgctcggtcg ttcggctgcg gcgagcggta tcagctcact caaaggcggt aatacggtta tccacagaat caggggataa cgcaggaaag aacatgtgag caaaaggcca gcaaaaggcc aggaaccgta aaaaggccgc gttgctggcg tttttccata ggctccgccc ccctgacgag catcacaaaa atcgacgctc aagtcagagg tggcgaaacc cgacaggact ataaagatac caggcgtttc cccctggaag ctccctcgtg cgctctcctg ttccgaccct gccgcttacc ggatacctgt ccgcctttct cccttcggga agcgtggcgc tttctcatag ctcacgctgt aggtatctca gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc gttnagcccg accgctgcgc cttanccggt aactancgtc ttgagtccaa cccggttaag acacgactta tcgccactgg gcagcagcca atggtaacan ggattaagca naaccnaggt aattnaggcg ggtgctanan aanttcttga antgggtggc ctaactac Database: na_all.dros >gi||gb|X01803|ATPG418 Transposable P vector conferring G418 resistance in Drosophila. (06-JUL-2002) Length = 5073 Score = 1104 bits (574), Expect = 0.0 Identities = 599/608 (98%), Gaps = 2/608 (0%) Strand = Plus / Plus Query: 72 gccagctgcattaatgaatcggccaacgcgcggggagaggcggtttgcgtattgggcgct 131 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 gccagctggattaatgaatcggccaacgcgcggggagaggcggtttgcgtattgggcgct 970 Query: 132 cttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtat 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 cttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtat 1030 Query: 192 cagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 cagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaaga 1090 Query: 252 acatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 acatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgt 1150 Query: 312 ttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggt 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 ttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggt 1210 Query: 372 ggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 ggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgc 1270 Query: 432 gctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaa 1330 Query: 492 gcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgct 551 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 gcgtggcgctttctcaatgctcacgctgtaggtatctcagttcggtgtaggtcgttcgct 1390 Query: 552 ccaagctgggctgtgtgcacgaaccccccgttnagcccgaccgctgcgccttanccggta 611 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 1391 ccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggta 1450 Query: 612 actancgtcttgagtccaacccggttaagacacgacttatcgccactgggcagcagccaa 671 |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 1451 actatcgtcttgagtccaacccgg-taagacacgacttatcgccact-ggcagcagccac 1508 Query: 672 tggtaaca 679 |||||||| Sbjct: 1509 tggtaaca 1516 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 2,262,611 sequences; 10,883,439,008 total letters Score E Sequences producing significant alignments: (bits) Value gi|31414875|gb|AY260554.1| Retrotransposon vector MEL/ELM, ... 1233 0.0 gi|31414872|gb|AY260553.1| Retrotransposon vector ELM 5, co... 1233 0.0 gi|58199|emb|X65302.1|CVPGEM3 Cloning vector pGEM-3 1233 0.0 gi|58196|emb|X65300.1|CVPGEM1 Cloning vector pGEM-1 1233 0.0 gi|3142442|gb|AF062998.1|AF062998 Retrotransposon vector pV... 1233 0.0 gi|3142439|gb|AF062997.1|AF062997 Retrotransposon vector pV... 1233 0.0 gi|3142436|gb|AF062996.1|AF062996 Retrotransposon vector pV... 1233 0.0 gi|310816|gb|L08951.1|SYNPT7T318 pT7T318 cloning vector 1233 0.0 gi|310773|gb|L08872.1|SYNPGEM3V pGEM3 cloning vector Gemini... 1233 0.0 gi|310771|gb|L08870.1|SYNPGEM1V pGEM1 cloning vector Gemini... 1233 0.0 gi|58197|emb|X65301.1|CVPGEM2 Cloning vector pGEM-2 1225 0.0 gi|310772|gb|L08871.1|SYNPGEM2V pGEM2 cloning vector Gemini... 1225 0.0 gi|58205|emb|X65303.1|CVPGEM4 Cloning vector pGEM-4 1225 0.0 gi|310845|gb|L08948.1|SYNSP6T719 pSP6T719 cloning vector 1217 0.0 gi|310817|gb|L08952.1|SYNPT7T319 pT7T319 cloning vector 1217 0.0 gi|34105724|gb|AY336796.1| Transformation vector pICon, com... 1148 0.0 gi|32140408|gb|AY301066.1| Transposition vector RescueMu, c... 1148 0.0 gi|31747150|gb|AY279346.1| Gene silencing vector pMTCbLCVA.... 1148 0.0 gi|31747149|gb|AY279345.1| Gene silencing vector pCPCbLCVA.... 1148 0.0 gi|31747148|gb|AY279344.1| Gene silencing vector pCPCbLCVB.... 1148 0.0 gi|31580803|gb|AY297714.1| Yeast truncation assay backbone ... 1148 0.0 gi|20454202|gb|AF502128.1| Transient expression vector pBI2... 1148 0.0 gi|23506937|gb|AY157312.1| Cloning vector YDp-W, complete s... 1148 0.0 gi|23506935|gb|AY157311.1| Cloning vector YDp-U, complete s... 1148 0.0 gi|23506933|gb|AY157310.1| Cloning vector YDp-L, complete s... 1148 0.0 gi|23506931|gb|AY157309.1| Cloning vector YDp-K, complete s... 1148 0.0 gi|23506929|gb|AY157308.1| Cloning vector YDp-H, complete s... 1148 0.0 gi|22347652|gb|AF531173.1| Cloning vector pDblet, complete ... 1148 0.0 gi|47420069|gb|AY603762.1| Cloning vector pLucFXR, complete... 1148 0.0 gi|47420067|gb|AY603761.1| Cloning vector pLucLRH-1, comple... 1148 0.0 etc etc \# anon- EST:Liang-1.56 = CG7808 >anon- EST:Liang-1.56 ttttctcgct ttttactcga acatgggtat tagccgcgat agtgcacaca aacgccgggc caccggaggc aagcgcaagt cgctccgcaa gaagcgcaag ttcgagttgg gacgccccgc cgccaacacc aagcttggct ccggccgcgt gcacaaggtg cgcacccgtg gtggaaacac caagctccgt gctctgcgcc tggaaaccgg aaacttcgcc tgggcctccg agggagtggc gcgcaagacc cgtatcgccg atgttgtgta caacgcctcc aacaacgagc tggtgcgaac caagaccttg gtgaagaaca gcatcgtggt catcgatgcc acgcccttcc gccagtggta cgaggctcac tacgtgctgc ccctgggacg caagcgtaac cccaagcacg cccagaagga ggacgagaac gacgtgctga ccaagaagcg cagcgaaaag gttatgaaga agtactggag cgccaaaagt acggcaaggt cgaacaaggc ctcgaggata attcaactcc gggcgcatcn tgggttgcat ttcttccgcc ccgganatnc ggtcgctccg aangggtaaa atttggaang naaaggantt ggaattcaac ntaagaagnn taagnttaaa gaaataaggn actanataaa ccttgaaaga cattgatttt gaaacaaaaa acngggataa aanaacttgg ttttttaaag gaagtgcatt Database: dmel_all_transcript_r320 >CG7808-RC type=mRNA; loc= 3R:join (25676955..25677022,25677287..25677393, 25677873..25678284,25678503..25678717); ID=CG7808-RC; name=CG7808-RC; db_xref='CG7808,FlyBase:FBgn0039713'; len=802 Length = 802 Genome Map Score = 1035 bits (538), Expect = 0.0 Identities = 682/734 (92%), Gaps = 12/734 (1%) Strand = Plus / Plus Query: 2 tttctcgctttttactcgaacatgggtattagccgcgatagtgcacacaaacgccgggcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 tttctcgctttttactcgaacatgggtattagccgcgatagtgcacacaaacgccgggcc 103 Query: 62 accggaggcaagcgcaagtcgctccgcaagaagcgcaagttcgagttgggacgccccgcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 accggaggcaagcgcaagtcgctccgcaagaagcgcaagttcgagttgggacgccccgcc 163 Query: 122 gccaacaccaagcttggctccggccgcgtgcacaaggtgcgcacccgtggtggaaacacc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gccaacaccaagcttggctccggccgcgtgcacaaggtgcgcacccgtggtggaaacacc 223 Query: 182 aagctccgtgctctgcgcctggaaaccggaaacttcgcctgggcctccgagggagtggcg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 aagctccgtgctctgcgcctggaaaccggaaacttcgcctgggcctccgagggagtggcg 283 Query: 242 cgcaagacccgtatcgccgatgttgtgtacaacgcctccaacaacgagctggtgcgaacc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 cgcaagacccgtatcgccgatgttgtgtacaacgcctccaacaacgagctggtgcgaacc 343 Query: 302 aagaccttggtgaagaacagcatcgtggtcatcgatgccacgcccttccgccagtggtac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 aagaccttggtgaagaacagcatcgtggtcatcgatgccacgcccttccgccagtggtac 403 Query: 362 gaggctcactacgtgctgcccctgggacgcaagcgtaaccccaagcacgcccagaaggag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 404 gaggctcactacgtgctgcccctgggacgcaagcgtaaccccaagcacgcccagaaagag 463 Query: 422 gacgagaacgacgtgctgaccaagaagcgcagcgaaaaggttatgaagaagta-ctggag 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 464 gacgagaacgacgtgctgaccaagaagcgcagcgaaaaggttatgaagaagtacctggag 523 Query: 481 cgccaaaagtacggcaaggtcgaacaaggcctcgaggat-aattcaactccgggcgcatc 539 ||||| ||||||||||||||||| || | |||||||||| | |||| |||||| |||||| Sbjct: 524 cgccagaagtacggcaaggtcgagcaggccctcgaggatcagttcacctccggccgcatc 583 Query: 540 ntgggttgcatttctt-ccgccccggana-tncggtcgctccgaangggtaaaatttgga 597 ||| ||||||||||| |||||||||| | | ||||||||||| | || || | |||||| Sbjct: 584 ttggcttgcatttcttcccgccccggacagtgcggtcgctccg-acggctacattttgga 642 Query: 598 angnaaagganttggaattc-aacntaagaagnntaagnttaaagaaataaggnactana 656 | | ||||| ||||||||| | | ||||||| ||| ||| || |||| |||| | Sbjct: 643 aggc-aaggagttggaattctaccttaagaagatcaagtctaagaaataaaggcactaga 701 Query: 657 taaaccttgaaagacattgattttgaaacaaaaaacngggataaaanaacttggtttttt 716 | || |||| |||||| |||||| ||||||||| || |||||| ||||| ||||||| Sbjct: 702 t-aagcttgcaagaca-tgatttgcaaacaaaaa--cggaataaaacaactt-gtttttt 756 Query: 717 aaaggaagtgcatt 730 | |||||||||||| Sbjct: 757 ataggaagtgcatt 770 \# anon- EST:Liang-1.62 no sequence data available \# anon- EST:Liang-1.66 = CG4978 >anon- EST:Liang-1.66 gaccaggtgc ccgtgggcca cattccgcgc agcatgacca tcatgtgcag gggtgaggtc actcgaatgg cccagcctgg ggatcacatt gtggtctctg gagtgttctt gccactgatg cgcacaggtt tcgctcagat gattcagggt ttgctctcgg agacattcct tcaagctcac cgcatcatct gtatcaacaa gaacgacgag atttcggaca aggatgccga gctgactcca gaagagctgg aggaattggc ccaggatgac ttctacgagc gcttggccac cagcttggca cccgaaatct atggccattt ggatgttaag aaagcgctgc tcttgctgtt ggtcggagga gttgacaagc ggcccgatgg catgaagatt cgtggcaaca tcaacatctg cctgatggga gatcccggtg tggccaagtc gcaactgctg ggctacatta gccgattggc cgtgcgatcg cagtacacca caggacgaag ttcttcgggg gtgggtctca cgctgcggtc atgaaggatc ccctcacagg cgaaatgact tggaaggaag actcttgtgc tggctgatca gggatctgct gcattgataa ttcacaaatg gcggatcagg atcttacacc ttcatagtga tggaacacaa accatttcat accaaaagca ggctctacaa cctaaacctc ctttcaatcc tgggccgctg ctaatccccc ttttggaacc taccatcctc cttcctacc Database: dmel_all_transcript_r320 >CG4978-RA type=mRNA; loc= 3L:join (8850320..8850489,8850554..8850923, 8850995..8851496,8851564..8852621,8852684..8853045); ID=Mcm7-RA; name=Mcm7-RA; db_xref='CG4978,FlyBase:FBgn0020633'; len=2462 Length = 2462 Genome Map Score = 1063 bits (553), Expect = 0.0 Identities = 626/645 (97%), Gaps = 7/645 (1%) Strand = Plus / Plus Query: 1 gaccaggtgcccgtgggccacattccgcgcagcatgaccatcatgtgcaggggtgaggtc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 863 gaccaggtgcccgtgggccacattccgcgcagcatgaccatcatgtgcaggggtgaggtc 922 Query: 61 actcgaatggcccagcctggggatcacattgtggtctctggagtgttcttgccactgatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 923 actcgaatggcccagcctggggatcacattgtggtctctggagtgttcttgccactaatg 982 Query: 121 cgcacaggtttcgctcagatgattcagggtttgctctcggagacattccttcaagctcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 cgcacaggtttcgctcagatgattcagggtttgctctcggagacattccttcaagctcac 1042 Query: 181 cgcatcatctgtatcaacaagaacgacgagatttcggacaaggatgccgagctgactcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 cgcatcatctgtatcaacaagaacgacgagatttcggacaaggatgccgagctgactcca 1102 Query: 241 gaagagctggaggaattggcccaggatgacttctacgagcgcttggccaccagcttggca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1103 gaagagctggaggaattggcccaggatgacttctacgagcgcttggccaccagcttggca 1162 Query: 301 cccgaaatctatggccatttggatgttaagaaagcgctgctcttgctgttggtcggagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 cccgaaatctatggccatttggatgttaagaaagcgctgctcttgctgttggtcggagga 1222 Query: 361 gttgacaagcggcccgatggcatgaagattcgtggcaacatcaacatctgcctgatggga 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1223 gttgacaagcggcccgatggcatgaagattcgtggcaacattaacatctgcctgatggga 1282 Query: 421 gatcccggtgtggccaagtcgcaactgctgggctacattagccgattggccgtgcgatcg 480 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1283 gatcccggtgtggccaagtcgcagctgctgggctacattagccgattggccgtgcgatcg 1342 Query: 481 cagtacaccacaggacgaagttcttcgggggtgggtctca-cgctgcggtcatgaaggat 539 |||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 1343 cagtacaccacagggcgaggttcttcgggggtgggtcttaccgctgcggtcatgaaggac 1402 Query: 540 cccctcacaggcgaaatgac-ttggaaggaaga-ctcttgtgctggctgatcaggga-tc 596 || ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||| || Sbjct: 1403 cctctcacaggcgagatgacattggaaggaggagctcttgtgctggctgatcagggagtc 1462 Query: 597 tgctgcattgat-aattc-acaa-atggcggatcaggatcttaca 638 |||||||||||| | ||| |||| |||||||||||||||| |||| Sbjct: 1463 tgctgcattgatgagttcgacaagatggcggatcaggatcgtaca 1507 \# anon- EST:Liang-1.72 = CG12011 >anon- EST:Liang-1.72 acagttcaac tgaaaccctc atcatgcatt ctctacgact cctggttctt cttggtgttc tgatggccac tcagggcaga gtcctagaac aggacaagac tccggaggtt gtcggttcaa ctcaagaaat caaaccaaac gtggaggtca agcaggaagt tgccaataaa gtgccggaaa cccagccgaa gctgggtggc gctgtcatct cccaaggcca atcttctgca gctatcgatc aggttggtgt gaaggagggt caagatcagg tggcgaactc cacaactcct gatgtccagg aaagccaacg cgaaggggtt tctttcgtcg aagtgactaa agaaaaccag gaagcacatg ccccactgag taaggtcgtc agtagccagt agccccagcg atagccgagg aaaagcagcc cacttccaat gagataccca aggaccaagg agccacgcaa agaagttata acccagaact atcccgacgt ccagggacgc gacaataaga ttcagttggt gttcgagcaa cctggtcaaa accaaaacca agattccaca gataagcatt caggatttgg gagaaagatt ttcaagtatc anggagtgca aattggtcaa cgggatntca atcaatttaa accagtatcc gagcatctac aaacaanntt ccattcttta cccgaaaggg tggaaaaant tttctgtggg taaaaaaaac cggatgccaa t Database: dmel_all_transcript_r320 >CG12011-RA type=mRNA; loc= 3L:join (1675248..1675273,1675346..1677049); Genome Map ID=CG12011-RA; name=CG12011-RA; db_xref='CG12011,FlyBase:FBgn0035257'; len=1730 Length = 1730 Score = 1035 bits (538), Expect = 0.0 Identities = 634/663 (95%), Gaps = 9/663 (1%) Strand = Plus / Plus Query: 1 acagttcaactgaaaccctcatcatgcattctctacgactcctggttcttcttggtgttc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acagttcaactgaaaccctcatcatgcattctctacgactcctggttcttcttggtgttc 60 Query: 61 tgatggccactcagggcagagtcctagaacaggacaagactccggaggttgtcggttcaa 120 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 61 tgatggccactcagggcagagttctagaacaggacaaggctccggaggttgtcgcttcac 120 Query: 121 ctcaagaaatcaaaccaaacgtggaggtcaagcaggaagttgccaataaagtgccggaaa 180 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 121 ctcaagaaatcaaacccaacgtggaggtcaagcaggaagttgccaataaagtgcgggaaa 180 Query: 181 cccagccgaagctgggtggcgctgtcatctcccaaggccaatcttctgcagctatcgatc 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cccagccgcagctgggtggcgctgtcatctcccaaggccaatcttctgcagctatcgatc 240 Query: 241 aggttggtgtgaaggagggtcaagatcaggtggcgaactccacaactcctgatgtccagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aggttggtgtgaaggagggtcaagatcaggtggcgaactccacaactcctgatgtccagg 300 Query: 301 aaagccaacgcgaaggggtttctttcgtcgaagtgactaaagaaaaccaggaagcacatg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aaagccaacgcgaaggggtttctttcgtcgaagtgactaaagaaaaccaggaagcacatg 360 Query: 361 ccccactgagtaaggtcgtcagtag-ccagtagccccagcgatagccgaggaaaagcagc 419 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 361 ccccactgagtaaggtcgtcagtagcccattagccccagcgatagccgaggaaaagcagc 420 Query: 420 ccacttccaatgagatacccaaggaccaaggagccacgcaaagaagttataacccagaac 479 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 421 ccacttccaatgagatacccaaggacc-aggagccaggcaaagaagttataacccagaac 479 Query: 480 tatcccgacgtccagggacgcgacaataagattcagttggtgttcgagcaacctggtcaa 539 ||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct: 480 catcccgacgtccaaggacgcgacaataagattcagtttgtgtacgagcagcctggtcaa 539 Query: 540 aaccaaaaccaagattccacagataagcattcaggatttgggagaaagattttcaagtat 599 |||||||||| |||||||||||||||||||||||||| | |||| ||||| ||||||||| Sbjct: 540 aaccaaaacc-agattccacagataagcattcaggatct-ggag-aagatcttcaagtat 596 Query: 600 canggagtgcaaattggtcaacgggatntcaatcaatttaaaccagtatccgagcatcta 659 || ||||||| || |||||||| |||| ||||||| || |||||||||||||||||||| Sbjct: 597 cagggagtgc-aagtggtcaac-ggatctcaatca--tttaaccagtatccgagcatcta 652 Query: 660 caa 662 ||| Sbjct: 653 caa 655 \# anon- EST:Liang-1.74 = CG14938 >anon- EST:Liang-1.74 ttttctacat ttttgaaatg tgtgccaggc ggcgcgtgac tttgtttggg tcgatcgata tggtttttgt gatatccgat tgttccttag ctgcgctcag tgaatcaaat ggatccgaag accaatccgt ctcaggcaat tttctcgcta gacacttaaa gttaaggggt ttttgttgcc gtaaccagca gaagcgcacc atcttgtatt tttattgtgt tttgactaag ttatgattat atccatatgg agcgacattc atagaaagca tcctcatcat acataaacat atgcagatat gcataggcat acaattataa tatatactta tagtttgtaa ataacacgca acaagaccct tggaaatcta tcgaaaatta ttatcacaac tgtattattt ttgcattttc caaggaggaa cattaataac gagctaacgc gcgaaaactt tcacatatat tggccaagtg tagtccttaa cccagtttac aatatatcga gccctgaaag tggggctgtg atgattatga gatatatata caattatatg acagtggaaa cagaagcagc ataacggnag acccaactaa cgaaaataat gaaaagggat taaacaaaca agttattana tttaatgtta ggttgaacta ctaaaagnta atgattgaaa agcacggggt ntaaagggat ggngaanagg agttcccgcn tgggaatgcg aatagntttt anttggggcg c Database: dmel_all_transcript_r320 >CG14938-RD type=mRNA; loc= 2L:complement (11783198..11786612,11786700..11786912, 11787536..11788021,11788106..11788273,11791158..11792545, 11792656..11792769,11794919..11795028, 11797997..11798304); ID=crol-RD; name=crol-RD; db_xref='CG14938,FlyBase:FBgn0020309'; len=6202 Length = 6202 Genome Map Score = 1248 bits (649), Expect = 0.0 Identities = 715/737 (97%), Gaps = 7/737 (0%) Strand = Plus / Plus Query: 1 ttttctacatttttgaaatgtgtgccaggcggcgcgtgactttgtttgggtcgatcgata 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4076 ttttctacatttttgaaatgtgtgccaggcggcgcgtgactttgtttgggtcgatcgata 4135 Query: 61 tggtttttgtgatatccgattgttccttagctgcgctcagtgaatcaaatggatccgaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4136 tggtttttgtgatatccgattgttccttagctgcgctcagtgaatcaaatggatccgaag 4195 Query: 121 accaatccgtctcaggcaattttctcgctagacacttaaagttaaggggtttttgttgcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4196 accaatccgtctcaggcaattttctcgctagacacttaaagttaaggggtttttgttgcc 4255 Query: 181 gtaaccagcagaagcgcaccatcttgtatttttattgtgttttgactaagttatgattat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4256 gtaaccagcagaagcgcaccatcttgtatttttattgtgttttgactaagttatgattat 4315 Query: 241 atccatatggagcgacattcatagaaagcatcctcatcatacataaacatatgcagatat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4316 atccatatggagcgacattcatagaaagcatcctcatcatacataaacatatgcagatat 4375 Query: 301 gcataggcatacaattataatatatacttatagtttgtaaataacacgcaacaagaccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4376 gcataggcatacaattataatatatacttatagtttgtaaataacacgcaacaagaccct 4435 Query: 361 tggaaatctatcgaaaattattatcacaactgtattatttttgcattttccaaggaggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4436 tggaaatctatcgaaaattattatcacaactgtattatttttgcattttccaaggaggaa 4495 Query: 421 cattaataacgagctaacgcgcgaaaactttcacatatattggccaagtgtagtccttaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4496 cattaataacgagctaacgcgcgaaaactttcacatatattggccaagtgtagtccttaa 4555 Query: 481 cccagtttacaatatatcgagccctgaaagtggggctgtgatgattatgagatatatata 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4556 cccagtttacaatatatcgagccctgaaagtggggctgtgatgattatgagatatatata 4615 Query: 541 caattatatgacagtggaaacagaagcagcataacggnagacccaactaacgaaaataat 600 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||| Sbjct: 4616 caattatatgacagtggaaacagaagcagcataacggcagacccaactaacgaga-taat 4674 Query: 601 gaaaagggattaaacaaacaagttattanatttaatgttaggttgaactactaaaagnta 660 |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || Sbjct: 4675 gaaaagggattaaacaaacaagttattatatttaatgttag-ttgaactactaaaag-ta 4732 Query: 661 atgattgaaaagcacggggtntaaagggatggngaanaggagttcccgcntgggaatgcg 720 |||||||||| |||||| |||| |||| || |||||||||||| ||||| |||| Sbjct: 4733 atgattgaaa-gcacggatcg--aaggaatggaga-taggagttcccgcgtgggagtgcg 4788 Query: 721 aatagnttttanttggg 737 | ||| ||||| ||||| Sbjct: 4789 agtagtttttagttggg 4805 \# anon- EST:Liang-1.75 = CG5481 >anon- EST:Liang-1.75 agcaacaggc gcagcagccg caccagcaac accaggctct ccagcagcac cagcaactgc cacccagcaa catctaccag cagatgtcca ccaccagcga gatatacccc acgaacacgg gtccttcgcg ctctgtctac tctgagcagt attactaccc caaggacaag cagagacaca tccacatcac cgagaacaag ctgagcaact gccacaccta tgaggcggct cctggcgcca agcagtcctc gccgatatcc tcgcagttcg ccagcgtgag gcggcagcag ctgccgccca actgcagcat cggcagggaa agtgcccgct tcaaggtgct aaacacggat cagggcaaga accagcagaa tctcctggat ctcgacggct cctcgatgtg ctacaacggt ctggcagact cgggctgcgg tggatctccc tccccgatgg ccatgctgat gtcgcacgag gacgagcacg cgctgtacca cacggcggat ggggatctgg acgacatgga acgactgtac gtcaaggtgg acgagcagca gcctccgcag cagcagcagc agctgatacc ctagttccac agcatccggg cggaangtca cctgcagtcc tggngggaat cagagcacgc ggancagtcc ggaagaacgg caggaatgca tcaaggganc caacnagttg tntacctccg gggaancgtg nccaangaaa nggagcct Database: dmel_all_transcript_r320 >CG5481-RA type=mRNA; loc= 2L:complement (1382554..1384298,1386593..1386878, 1388514..1388677,1388773..1389019,1389097..1389192, 1392559..1392964,1393055..1393174,1393253..1394190, 1394356..1394487,1395858..1395998,1396140..1396424, 1397569..1397671,1398728..1398918,1421570..1422115); ID=lea-RA; name=lea-RA; db_xref='CG5481,FlyBase:FBgn0002543'; len=5400 Length = 5400 Genome Map Score = 1037 bits (539), Expect = 0.0 Identities = 541/542 (99%) Strand = Plus / Plus Query: 1 agcaacaggcgcagcagccgcaccagcaacaccaggctctccagcagcaccagcaactgc 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3895 agcaacaggcgcagcagacgcaccagcaacaccaggctctccagcagcaccagcaactgc 3954 Query: 61 cacccagcaacatctaccagcagatgtccaccaccagcgagatataccccacgaacacgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3955 cacccagcaacatctaccagcagatgtccaccaccagcgagatataccccacgaacacgg 4014 Query: 121 gtccttcgcgctctgtctactctgagcagtattactaccccaaggacaagcagagacaca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4015 gtccttcgcgctctgtctactctgagcagtattactaccccaaggacaagcagagacaca 4074 Query: 181 tccacatcaccgagaacaagctgagcaactgccacacctatgaggcggctcctggcgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4075 tccacatcaccgagaacaagctgagcaactgccacacctatgaggcggctcctggcgcca 4134 Query: 241 agcagtcctcgccgatatcctcgcagttcgccagcgtgaggcggcagcagctgccgccca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4135 agcagtcctcgccgatatcctcgcagttcgccagcgtgaggcggcagcagctgccgccca 4194 Query: 301 actgcagcatcggcagggaaagtgcccgcttcaaggtgctaaacacggatcagggcaaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4195 actgcagcatcggcagggaaagtgcccgcttcaaggtgctaaacacggatcagggcaaga 4254 Query: 361 accagcagaatctcctggatctcgacggctcctcgatgtgctacaacggtctggcagact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4255 accagcagaatctcctggatctcgacggctcctcgatgtgctacaacggtctggcagact 4314 Query: 421 cgggctgcggtggatctccctccccgatggccatgctgatgtcgcacgaggacgagcacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4315 cgggctgcggtggatctccctccccgatggccatgctgatgtcgcacgaggacgagcacg 4374 Query: 481 cgctgtaccacacggcggatggggatctggacgacatggaacgactgtacgtcaaggtgg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4375 cgctgtaccacacggcggatggggatctggacgacatggaacgactgtacgtcaaggtgg 4434 Query: 541 ac 542 || Sbjct: 4435 ac 4436 \# anon- EST:Liang-1.76 = CG31363 >anon- EST:Liang-1.76 gacttaattc gcctttcgaa ctgaacgaac gtgccgcggc atctgcaatt ttccgtgcat ttccacttgc attttgtgtg tttcactttg ttacgtgtgt gccagttttc catttaatcg ttaccgatcg tccaataagc ggctacagcg gcaaaatgat ctctaacttt gattgcaccg ataatcaggc cagcagcaag gtgctgaggc ccccgggcgg cggatcgagc gacatctttg gatcggagat gccgcagacc cccaggaacg tgaagaatcg catggcgtcc aacatattcg ctgccgagaa agataatgga gtgaaaaaca acggtgatgc accacgtcgc ggccagaaga ccgtcgactc ccactctcgg ctgtttgggg agcccacccg cccgatcacc cccggcaaga accacatgaa gagcagcatt ccctttggtc agaacacaga ggccgttgcc gcccagaagc tgctgaccac caatggccac tacaacggca agagcggatc ggtgtcctcg gcctcgtctt cggtgtcgtc ctccancgag aacctcaaag atgaacagtg gctcgagatc aganggcaac cccgtcacan gcgaaggcta caaggtcgta accaacgagt attcccaagc gccaggaagt cgtccaatng cgggaactcc ggtgatnaac aaagaaacgg cattccccca ngcgggnaat cgtcgggnct gttgtaatga caanccggga attt Database: dmel_all_transcript_r320 >CG31363-RD type=mRNA; loc= 3R:complement (7416128..7417047,7418107..7418364, 7419373..7419506,7445444..7445674); ID=CG31363-RD; name=CG31363-RD; db_xref='CG31363,FlyBase:FBgn0051363'; len=1543 Length = 1543 Genome Map Score = 1260 bits (655), Expect = 0.0 Identities = 718/741 (96%), Gaps = 6/741 (0%) Strand = Plus / Plus Query: 2 acttaattcgcctttcgaactgaacgaacgtgccgcggcatctgcaattttccgtgcatt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 34 acttaattcgcctttcgaactgaacgaacgtgccgcggcatctgcaattttctgtgcatt 93 Query: 62 tccacttgcattttgtgtgtttcactttgttacgtgtgtgccagttttccatttaatcgt 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 tccacttgcattttgtgtgtttcactttgttacgtgtgtgccagttttccatttaatcgt 153 Query: 122 taccgatcgtccaataagcggctacagcggcaaaatgatctctaactttgattgcaccga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 taccgatcgtccaataagcggctacagcggcaaaatgatctctaactttgattgcaccga 213 Query: 182 taatcaggccagcagcaaggtgctgaggcccccgggcggcggatcgagcgacatctttgg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 taatcaggccagcagcaaggtgctgaggcccccgggcggcggatcgagcgacatctttgg 273 Query: 242 atcggagatgccgcagacccccaggaacgtgaagaatcgcatggcgtccaacatattcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 atcggagatgccgcagacccccaggaacgtgaagaatcgcatggcgtccaacatattcgc 333 Query: 302 tgccgagaaagataatggagtgaaaaacaacggtgatgcaccacgtcgcggccagaagac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 tgccgagaaagataatggagtgaaaaacaacggtgatgcaccacgtcgcggccagaagac 393 Query: 362 cgtcgactcccactctcggctgtttggggagcccacccgcccgatcacccccggcaagaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 cgtcgactcccactctcggctgtttggggagcccacccgcccgatcacccccggcaagaa 453 Query: 422 ccacatgaagagcagcattccctttggtcagaacacagaggccgttgccgcccagaagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ccacatgaagagcagcattccctttggtcagaacacagaggccgttgccgcccagaagct 513 Query: 482 gctgaccaccaatggccactacaacggcaagagcggatcggtgtcctcggcctcgtcttc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gctgaccaccaatggccactacaacggcaagagcggatcggtgtcctcggcctcgtcttc 573 Query: 542 ggtgtcgtcctccancgagaacctcaaagatgaacagtggctcgagatcaganggcaacc 601 |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 574 ggtgtcgtcctccaccgagaacctc-aagatgaacagtggctcgagatcagagggcaacc 632 Query: 602 ccgtcacangcgaaggctacaaggtcgtaaccaacgagtattcccaagcgccaggaagtc 661 |||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||| |||| Sbjct: 633 ccgtcacaggcgagggctacaaggtcgtagccaacgagtattccc-agcgccagg-agtc 690 Query: 662 gtccaatngcgggaactccggtgatnaacaaagaaacggcattcccccangcgggnaatc 721 ||||||| || || ||||||||||| ||||| ||| ||||||||||| |||| | || Sbjct: 691 gtccaatggc-ggcactccggtgatcaacaa--gaaccgcattcccccaggcggctactc 747 Query: 722 gtcgggnctgttgtaatgaca 742 |||||| |||| ||||||||| Sbjct: 748 gtcgggcctgtggtaatgaca 768 \# anon- EST:Liang-1.79 = CG5395 >anon- EST:Liang-1.79 ggctctaaat agaatatctg cagaaacatg gacaacttcg gactgggcgg atcggatcta agcaaggggc agatattcca ggtactggtt cgcctgtctg tggcctcgct gatcacatat tattcggtga aatggatgat gaaccagatg gatccgacca gtaaaaacaa gaaaaaggcc aaagttctgg ctgaggagca gcttaagagg ctagccgagc aggagggctt caagctaaga gggcaagagt ttagcgacta cgagcttatg attgcgtcac atcttgttgt tcccgccgac ataacagtca gttgggccga tatcgccggt ctgggattca gtcattcatg agctccggga atcggtggtg ctgccaatcc agcacaagga tctcttcaag cattcgaagc tgtggcaggc gcccaaaggc gtcctgctcc atggacnanc gggctgtgga aagacgctga tancgaaggc gacggnaaaa gaagcgggaa tgcgccttta tcaacttggg angtcgccat tcttancgac aagtggtacg gggaatncca ngaaattgac ttctgctgtc ttctcgcttc atcncgaatt tagcatgcan taatttttat tgacnaaaat aactcatttt tgngatttcg anacattacg ancattaang gnnaccgccc attattaagn acccantttt atnatagcng tggggattgg cttagcacca aat Database: dmel_all_transcript_r320 >CG5395-RA type=mRNA; loc= 2L:complement (10295001..10296007, 10296064..10296354); ID=nmd-RA; name=nmd-RA; db_xref='CG5395,FlyBase:FBgn0005322'; len=1298 Length = 1298 Genome Map Score = 1063 bits (553), Expect = 0.0 Identities = 630/657 (95%), Gaps = 7/657 (1%) Strand = Plus / Plus Query: 2 gctctaaatagaatatctgcagaaacatggacaacttcggactgggcggatcggatctaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 gctctaaatagaatatctgcagaaacatggacaacttcggactgggcggatcggatctaa 143 Query: 62 gcaaggggcagatattccaggtactggttcgcctgtctgtggcctcgctgatcacatatt 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 gcaaggggcagatattccaggtactggttcgcctgtctgtggcctcgctgatcacatatt 203 Query: 122 attcggtgaaatggatgatgaaccagatggatccgaccagtaaaaacaagaaaaaggcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 attcggtgaaatggatgatgaaccagatggatccgaccagtaaaaacaagaaaaaggcca 263 Query: 182 aagttctggctgaggagcagcttaagaggctagccgagcaggagggcttcaagctaagag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 aagttctggctgaggagcagcttaagaggctagccgagcaggagggcttcaagctaagag 323 Query: 242 ggcaagagtttagcgactacgagcttatgattgcgtcacatcttgttgttcccgccgaca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 ggcaagagtttagcgactacgagcttatgattgcgtcacatcttgttgttcccgccgaca 383 Query: 302 taacagtcagttgggccgatatcgccggtctgggattcagtcattcatgagctccgggaa 361 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 384 taacagtcagttgggccgatatcgccggtct-ggattcagtcattcaggagctccgggaa 442 Query: 362 tcggtggtgctgccaatccagcacaaggatctcttcaagcattcgaagctgtggcaggcg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tcggtggtgctgccaatccagcacaaggatctcttcaagcattcgaagctgtggcaggcg 502 Query: 422 cccaaaggcgtcctgctccatggacnancgggctgtggaaagacgctgatancgaaggcg 481 ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| Sbjct: 503 cccaaaggcgtcctgctccatggaccaccgggctgtggaaagacgctgatagcgaaggcg 562 Query: 482 acggnaaaagaagcgggaatgcgcctttatcaacttgggangtcgccattcttancgaca 541 |||| |||||| ||||||||||| |||||||||||| ||| ||||||||||||| ||||| Sbjct: 563 acggcaaaagaggcgggaatgcg-ctttatcaactt-ggacgtcgccattcttaccgaca 620 Query: 542 agtggtacggggaatnccangaaattgacttctgctgtcttctcgctt-catcncgaatt 600 ||||||||||||||| ||| |||||||||||||||||||||||||||| |||| ||||| Sbjct: 621 agtggtacggggaatccca-gaaattgacttctgctgtcttctcgcttgcatcgcgaatc 679 Query: 601 tag-catgcantaatttttattgacnaaaataactcatttttgngatttcganacat 656 || |||||| | |||||||||||| ||| ||||||||||| ||| |||| |||| Sbjct: 680 gagccatgcatt-atttttattgacgaaatagactcatttttgcgatctcgaaacat 735 \# anon- EST:Liang-1.80 == CG14996 \# anon- EST:Liang-1.83 = CG7055 >anon- EST:Liang-1.83 acgaccctat taccagcccc agtacggcgg acatcccacg ccacagccct actacgcacc gttctcgccg tatcagcagt cctatggccc gccacctggc tcgcactaca tgtcaccgcg tccgccgccg ccgcagcaca atggcaatcc cgggcatccg tatgcgccgg agcatggaag caatccaccg ccaccacagc agcagcaaca acaacaaccg ccaccaggac acctgcacga gccgagcggt ggaggacccg gggccccagg cggtggagct ggagcggcag cagcagcggc gcccggagcc ggagtgtatc ccacgcccgg ggcaggagcg ggaccaggag caccacctgg accagctgga ggagcaccgc tgggcgaggc cgcagtagct gggggagtag ctccgccagc ggcaacagca cctggcaagc atccagaggc ggagaagcac gaggcggact aagacaagga atcccaccac ccagatctag ttgtggtccc taacttatat atgaatcgat tcctggtgtt gtaacatagc tgtcccctcc cggaacttcc ggaaggcaaa caaccggaat gctcttaact tgaaatccct atttaggcgc cacacctaaa gaactccaca tcaatccatt ctcaaattaa agtttatatc actttttttt cgcnaaagcc taaattttaa tattttataa ctgagtgtgc gtccaatcct ggactgttag ctaaat Database: dmel_all_transcript_r320 >CG7055-RA type=mRNA; loc= X:8888309..8890962 ; ID=dalao-RA; Genome Map name=dalao-RA; db_xref='CG7055,FlyBase:FBgn0030093'; len=2654 Length = 2654 Score = 1263 bits (657), Expect = 0.0 Identities = 727/749 (97%), Gaps = 7/749 (0%) Strand = Plus / Plus Query: 1 acgaccctattaccagccccagtacggcggacatcccacgccacagccctactacgcacc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1877 acgaccctattaccagccccagtacggcggacatcccacgccacagccctactacgcacc 1936 Query: 61 gttctcgccgtatcagcagtcctatggcccgccacctggctcgcactacatgtcaccgcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1937 gttctcgccgtatcagcagtcctatggcccgccacctggctcgcactacatgtcaccgcg 1996 Query: 121 tccgccgccgccgcagcacaatggcaatcccgggcatccgtatgcgccggagcatggaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1997 tccgccgccgccgcagcacaatggcaatcccgggcatccgtatgcgccggagcatggaag 2056 Query: 181 caatccaccgccaccacagcagcagcaacaacaacaaccgccaccaggacacctgcacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2057 caatccaccgccaccacagcagcagcaacaacaacaaccgccaccaggacacctgcacga 2116 Query: 241 gccgagcggtggaggacccggggccccaggcggtggagctggagcggcagcagcagcggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2117 gccgagcggtggaggacccggggccccaggcggtggagctggagcggcagcagcagcggc 2176 Query: 301 gcccggagccggagtgtatcccacgcccggggcaggagcgggaccaggagcaccacctgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2177 gcccggagccggagtgtatcccacgcccggggcaggagcgggaccaggagcaccacctgg 2236 Query: 361 accagctggaggagcaccgctgggcgaggccgcagtagctgggggagtagctccgccagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 accagctggaggagcaccgctgggcgaggccgcagtagctgggggagtagctccgccagc 2296 Query: 421 ggcaacagcacctggcaagcatccagaggcggagaagcacgaggcggactaagacaagga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2297 ggcaacagcacctggcaagcatccagaggcggagaagcacgaggcggactaagacaagga 2356 Query: 481 atcccaccacccagat-ctagttgtggtccctaacttatatatgaatcgattcctggtgt 539 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2357 atcccaccacccagatcctagttgtggtccctaacttatatatgaatcgatccctggtgt 2416 Query: 540 tgtaacatagctgtcccctcccggaacttccggaaggcaaacaaccggaatgctcttaac 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2417 tgtaacatagctgtcccctcccggaacttccggaaggcaaacaaccggaatgctcttaac 2476 Query: 600 ttgaaatccctatttaggcgccacacctaaagaactccacatcaat-ccattctcaaatt 658 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 2477 ttgaaatccctatttaggcgccacacct-aagaactccacatcaatcccattctcaaatt 2535 Query: 659 aaagtttatatcacnnnnnnnncgcnaaagcctaaattttaatatttt-ataactgagtg 717 ||||||||||||| ||| |||||| |||||||||||||| ||||||||||| Sbjct: 2536 \-aagtttatatcacttttttttcgcg-aagcct-aattttaatattttaataactgagtg 2592 Query: 718 tgcgtccaatcctggactgttagctaaat 746 |||||| || ||||||||| ||||||| Sbjct: 2593 tgcgtcgcattctggactgtatgctaaat 2621 \# anon- EST:Liang-2.1 no sequence data available \# anon- EST:Liang-2.12 = CG17841 >anon- EST:Liang-2.12 ggcacgaatc catgagccct cgcaccgccg agtcttccag ctcctcccga tcgcccagtc gtccaatcgc catgtcccag acgcagtgcc gcctgtaaac aaccgccgag tgaagtccgc agcccgcagt catcggtagc agcagcgtca ggagtccgga atccgtttct cggtttccgc aacaggttgc gtcgccttcg ccaacagaag gttttagtgc gagctttgat cagagcgtgg agtgcgtata cgcgccagga tgcagcagcg ccgacagccg gcgaatggca acggcagagg aggaggaacc accgccgccg tccgtacgga ggagcagcaa caacagcagc agccattgag tcaggatgct ggcgccaagg aggcgggcag cacgccgggc aagacaacgg gacgcggctg ctatttctcg ctggccttct ccatcggttc gatgggcctg gcctgcggca gcctgtggca gataccgaac agcagtgacc gcatctcgct gcagcgcggc ctggtgctca cctcgctggg attcatctat tttgtctcgc taacggactt ctgcaacaaa tacctgctgg gagacgacgc atggacagcg ctttcgtcgc aaagtaccgc ctgatgatgt tccgacgtcc tggagataan caaacaaaat cgtctcggga atccaaggcc tcaatctcct tcttcgtggg aactcatcgt ctgcaaagtc gacatgcacc aaatccnttg ttg Database: dmel_all_transcript_r320 >CG17841-RA type=mRNA; loc= X:join (10107959..10108667,10121567..10122017, 10122089..10122418,10122490..10123139); ID=CG17841-RA; name=CG17841-RA; db_xref='CG17841,FlyBase:FBgn0028480'; len=2140 Length = 2140 Genome Map Score = 1304 bits (678), Expect = 0.0 Identities = 737/750 (98%), Gaps = 7/750 (0%) Strand = Plus / Plus Query: 2 gcacgaatccatgagccctcgcaccgccgagtcttccagctcctcccgatcgcccagtcg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 gcacgaatccatgagccctcgcaccgccgagtcttccagctcctcccgatcgcccagtcg 107 Query: 62 tccaatcgccatgtcccagacgcagtgccgcctgtaaacaaccgccgagtgaagtccgca 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 tccaatcgccatgtcccagacgcagtgccgcctgtaaacaaccgccgagtgaagtccgca 167 Query: 122 gcccgcagtcatcggtagcagcagcgtcaggagtccggaatccgtttctcggtttccgca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 gcccgcagtcatcggtagcagcagcgtcaggagtccggaatccgtttctcggtttccgca 227 Query: 182 acaggttgcgtcgccttcgccaacagaaggttttagtgcgagctttgatcagagcgtgga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 acaggttgcgtcgccttcgccaacagaaggttttagtgcgagctttgatcagagcgtgga 287 Query: 242 gtgcgtatacgcgccaggatgcagcagcgccgacagccggcgaatggcaacggcagagga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gtgcgtatacgcgccaggatgcagcagcgccgacagccggcgaatggcaacggcagagga 347 Query: 302 ggaggaaccaccgccgccgtccgtacggaggagcagcaacaacagcagcagccattgagt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 ggaggaaccaccgccgccgtccgtacggaggagcagcaacaacagcagcagccattgagt 407 Query: 362 caggatgctggcgccaaggaggcgggcagcacgccgggcaagacaacgggacgcggctgc 421 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 408 caggatgctggcgccaaggaggcgggcagcacgccgggcaaggcaacgggacgcggctgc 467 Query: 422 tatttctcgctggccttctccatcggttcgatgggcctggcctgcggcagcctgtggcag 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 tatttctcgctggccttctccatcggttcgatgggcctggcctgcggcagcctgtggcag 527 Query: 482 ataccgaacagcagtgaccgcatctcgctgcagcgcggcctggtgctcacctcgctggga 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 ataccgaacagcagtgaccgcatctcgctgcagcgcggcctggtgctcacctcgctggga 587 Query: 542 ttcatctattttgtctcgctaacggacttctgcaacaaatacctgctgggagacgacgca 601 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 588 ttcatctattttgtctcgctaacggacttctgcaacaaatacctgct-ggagacgacgca 646 Query: 602 tggacagcgctttcgtcgcaaagtaccgcctgatgatgttccgacgtcctggagataanc 661 ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| | Sbjct: 647 tggacagcgctttcgtcgc-aagtaccgcctgatgatg-tccgacgtcctggagataacc 704 Query: 662 aaacaaaatcgtctcgggaatccaaggcctcaatctccttcttcgtgggaactcatcgtc 721 |||||||||||||||| ||||| |||||||| |||||||||||||||| |||||||||| Sbjct: 705 \-aacaaaatcgtctcggcaatcc-aggcctcattctccttcttcgtggg-actcatcgtc 761 Query: 722 tgcaaagtcgacatgcaccaaatccnttgt 751 ||| |||||||| |||||||||||| |||| Sbjct: 762 tgc-aagtcgacgtgcaccaaatcctttgt 790 \# anon- EST:Liang-2.13 = ? on hth intron ? >anon- EST:Liang-2.13 gtcattatga acacacacaa aacacccaca cacacattgt aaattagtca gaatcagtaa atgaaaacaa aaaaaaaaaa aaacatacaa aaagcgaaga aagcccaaaa caaaaaaaaa atacccacac aaaacacaaa aatatattaa taaattcaga aatatacaga atcaagcgaa aaggagagca gaggaatttc ctagccggag cagcagcagc aacatcaacg gcagctacat gcaacatgcg gcagcaacat cgccggccag cagcagcagc cgaggacagt aaccgacatg agtgactaac cagcgacaaa cgagcttcca agaggcttcg gccacaatcc gaaccgaaaa acacaacgaa ccgactccac gaacgaccaa accgaactgc gaaccacgaa tcacgagtgt atcttgcgga tgcggatacc cattaatgtt gctatcgctg ccacggccag aatttgtttg ctctcctctg tgtacagtaa atgccataaa tataagttcc gaaaaagcac tgaggacagc cgtggctagg gccgaaagtg agtacacttt tgcctgcccc angcgccttc ccagttcatc tcaancgctc tcaaaaaaca ngaaaacacg taaaccacaa caaaacatca agtttntata tctcaaggca gantggtaaa tggntnaagg ttanacaatt acgaaancaa aanncaactg gggcaacaat taatt Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003687 |gb|AE003687| arm:3R 6210549..6470716 estimated- cyto:86B2-86C3 gadfly- seqname:AE003687 seq_release:3 Length = 260168 Score = 929 bits (483), Expect = 0.0 Genome Map Identities = 534/546 (97%), Gaps = 6/546 (1%) Strand = Plus / Minus Query: 122 tacccacacaaaacacaaaaatatattaataaattcagaaatatacagaatcaagcgaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200459 tacccacacaaaacacaaaaatatattaataaattcagaaatatacagaatcaagcgaaa 200400 Query: 182 aggagagcagaggaatttcctagccggagcagcagcagcaacatcaacggcagctacatg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200399 aggagagcagaggaatttcctagccggagcagcagcagcaacatcaacggcagctacatg 200340 Query: 242 caacatgcggcagcaacatcgccggccagcagcagcagccgaggacagtaaccgacatga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200339 caacatgcggcagcaacatcgccggccagcagcagcagccgaggacagtaaccgacatga 200280 Query: 302 gtgactaaccagcgacaaacgagcttccaagaggcttcggccacaatccgaaccgaaaaa 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200279 gtgactaaccagcgacaaacgagcttccaagaggcttcggccacaatccgaaccgaaaaa 200220 Query: 362 cacaacgaaccgactccacgaacgaccaaaccgaactgcgaaccacgaatcacgagtgta 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200219 cacaacgaaccgactccacgaacgaccaaaccgaactgcgaaccacgaatcacgagtgta 200160 Query: 422 tcttgcggatgcggatacccattaatgttgctatcgctgccacggccagaatttgtttgc 481 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 200159 tcttgcggatgcggatacccattaatgttgctatagctgccacggccagaatttgtttgc 200100 Query: 482 tctcctctgtgtacagtaaatgccataaatataagttccgaaaaagcactgaggacagcc 541 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 200099 tctcctctgtgtacagtaaatgccataaatataagttccg-aaaagcactgaggacagcc 200041 Query: 542 gtggctagggccgaaagtgagtacacttttgcctgccccangcgccttcccagttcatct 601 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 200040 gtggctagggccg-aagtgagtacacttttgcctgccccacgcgccttcccagttcatct 199982 Query: 602 caancgctctcaaaaaacangaaaacacgtaaaccacaacaaaacatcaagtttntatat 661 || | ||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||| Sbjct: 199981 cacgccctctcaaaaaaca-gaaaacacgtaaa-cacaac-aaacatc-agtttatatat 199926 Query: 662 ctcaag 667 |||||| Sbjct: 199925 ctcaag 199920 \# anon- EST:Liang-2.14 = sd? >anon- EST:Liang-2.14 aaaatnatan ggatatcgat gntttgatag tatttnaagt ggaggaggtt atttatanan anttataagg gaatactang ttattaatt Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003500 |gb|AE003500| arm:X 15436758..15740102 estimated- cyto:13E8-14A6 gadfly- seqname:AE003500 seq_release:3 Length = 303345 Score = 79.5 bits (41), Expect = 1e-14 Genome Map Identities = 60/73 (82%) Strand = Plus / Plus Query: 4 atnatanggatatcgatgntttgatagtatttnaagtggaggaggttatttatananant 63 || ||| ||||||||||| |||| || | || ||||||||||||||||||||| | | | Sbjct: 119088 atcatacggatatcgatgccttgacagcacttcaagtggaggaggttatttatacacagt 119147 Query: 64 tataagggaatac 76 | |||||||||| Sbjct: 119148 cacaagggaatac 119160 Database: dmel_all_transcript_r320 >CG8544-RC type=mRNA; loc= X:join (15549171..15549532,15550610..15550737, 15551010..15551148,15551437..15551567,15554201..15554241, 15554322..15554496,15554633..15554695,15554766..15554938, 15555056..15555290,15555349..15556750); ID=sd-RC; name=sd-RC; db_xref='CG8544,FlyBase:FBgn0003345'; len=2849 Length = 2849 Genome Map Score = 79.5 bits (41), Expect = 3e-15 Identities = 60/73 (82%) Strand = Plus / Plus Query: 4 atnatanggatatcgatgntttgatagtatttnaagtggaggaggttatttatananant 63 || ||| ||||||||||| |||| || | || ||||||||||||||||||||| | | | Sbjct: 1944 atcatacggatatcgatgccttgacagcacttcaagtggaggaggttatttatacacagt 2003 Query: 64 tataagggaatac 76 | |||||||||| Sbjct: 2004 cacaagggaatac 2016 \# anon- EST:Liang-2.15 == CG15100 \# anon- EST:Liang-2.16 = CG4602? match bad, but note n's in query seq >anon- EST:Liang-2.16 tcatacnggt tctggccata cccgaggant atcgggccct gnanatgntt aataacggaa cnantgtgcc gggantccan annccggact ccaagctacn gnccgaagtc attaancgca tcgagggana gntgccgcat caagtgatca anacntanta ccccaagttg gtggaattca atctgccgga gtanccggcc ttaccctcnt tctacgatgc gcgcaaaatc taggagattc ggngcaccat tatcgtgtgn natnttaaga acnagtggcg cctaaangat ctgatggaat gctttcancg nnctggggag gtgaagtatg cncgctgggc cgagaaggat ancaanacgt actgcattga ttgatttctg cgaacagacc ancattattc acgctctgcg catgcagggn caggagttca agggtggcca nctaanncgt tancaatcna cg Database: dmel_all_transcript_r320 >CG4602-RA type=mRNA; loc= 2L:9905316..9907453 ; ID=Srp54-RA; Genome Map name=Srp54-RA; db_xref='CG4602,FlyBase:FBgn0024285'; len=2138 Length = 2138 Score = 639 bits (332), Expect = 0.0 Identities = 397/445 (89%), Gaps = 1/445 (0%) Strand = Plus / Plus Query: 1 tcatacnggttctggccatacccgaggantatcgggccctgnanatgnttaataacggaa 60 |||||| |||||||||||||||||||| |||||||||||| | ||| | || ||||||| Sbjct: 389 tcatacccgttctggccatacccgaggagtatcgggccctggagatgctcaagaacggaa 448 Query: 61 cnantgtgccgggantccanannccggactccaagctacngnccgaagtcattaancgca 120 | | |||||||||| |||| | |||||||||||||||| | ||||||||||||| |||| Sbjct: 449 ccattgtgccgggactccagaagccggactccaagctaccgcccgaagtcattaaccgca 508 Query: 121 tcgaggganagntgccgcatcaagtgatcaanacntantaccccaagttggtggaattca 180 |||||||| || ||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 509 tcgagggacagctgccgcagcaagtgatcaagacgtacgaccccaagttggtggaattca 568 Query: 181 atctgccggagtanccggccttaccctcnttctacgatgcgcgcaaaatctaggagattc 240 ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 569 atctgccggagtacccggccttaccctcgttctacgatgcgcgcaaaatcgaggagattc 628 Query: 241 ggngcaccattatcgtgtgnnatnttaagaacnagtggcgcctaaangatctgatggaat 300 || |||||||||||||||| || |||||||| ||||||| ||| | ||||||||||||| Sbjct: 629 ggcgcaccattatcgtgtgcgatgttaagaacgagtggcggctagacgatctgatggaat 688 Query: 301 gctttcancgnnctggggaggtgaagtatgcncgctgggccgagaaggatancaanacgt 360 ||||||| || ||||||||||||||||||| || |||||||||||||||| ||| |||| Sbjct: 689 gctttcagcgcgctggggaggtgaagtatgcccgttgggccgagaaggataacaagacgt 748 Query: 361 actgcattgattgatttctgcgaacagaccancattattcacgctctgcgcatgcagggn 420 |||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 749 actgca-tgattgagttctgcgaacagaccagcattattcacgccctgcgcatgcagggc 807 Query: 421 caggagttcaagggtggccanctaa 445 |||||||||||||||||||| |||| Sbjct: 808 caggagttcaagggtggccatctaa 832 Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003626 |gb|AE003626| arm:2L 9701091..9966189 estimated- cyto:30C5-30F5 gadfly- seqname:AE003626 seq_release:3 Length = 265099 Score = 639 bits (332), Expect = 0.0 Genome Map Identities = 397/445 (89%), Gaps = 1/445 (0%) Strand = Plus / Plus Query: 1 tcatacnggttctggccatacccgaggantatcgggccctgnanatgnttaataacggaa 60 |||||| |||||||||||||||||||| |||||||||||| | ||| | || ||||||| Sbjct: 204614 tcatacccgttctggccatacccgaggagtatcgggccctggagatgctcaagaacggaa 204673 Query: 61 cnantgtgccgggantccanannccggactccaagctacngnccgaagtcattaancgca 120 | | |||||||||| |||| | |||||||||||||||| | ||||||||||||| |||| Sbjct: 204674 ccattgtgccgggactccagaagccggactccaagctaccgcccgaagtcattaaccgca 204733 Query: 121 tcgaggganagntgccgcatcaagtgatcaanacntantaccccaagttggtggaattca 180 |||||||| || ||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 204734 tcgagggacagctgccgcagcaagtgatcaagacgtacgaccccaagttggtggaattca 204793 Query: 181 atctgccggagtanccggccttaccctcnttctacgatgcgcgcaaaatctaggagattc 240 ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 204794 atctgccggagtacccggccttaccctcgttctacgatgcgcgcaaaatcgaggagattc 204853 Query: 241 ggngcaccattatcgtgtgnnatnttaagaacnagtggcgcctaaangatctgatggaat 300 || |||||||||||||||| || |||||||| ||||||| ||| | ||||||||||||| Sbjct: 204854 ggcgcaccattatcgtgtgcgatgttaagaacgagtggcggctagacgatctgatggaat 204913 Query: 301 gctttcancgnnctggggaggtgaagtatgcncgctgggccgagaaggatancaanacgt 360 ||||||| || ||||||||||||||||||| || |||||||||||||||| ||| |||| Sbjct: 204914 gctttcagcgcgctggggaggtgaagtatgcccgttgggccgagaaggataacaagacgt 204973 Query: 361 actgcattgattgatttctgcgaacagaccancattattcacgctctgcgcatgcagggn 420 |||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 204974 actgca-tgattgagttctgcgaacagaccagcattattcacgccctgcgcatgcagggc 205032 Query: 421 caggagttcaagggtggccanctaa 445 |||||||||||||||||||| |||| Sbjct: 205033 caggagttcaagggtggccatctaa 205057 \# >anon- EST:Liang-2.19 = CG32177 >anon- EST:Liang-2.19 gatgatcagt tgggaccgcc aaaggcggac ttcagtgctc cgccaccgca cgaggcgaac gttggccatg gccagcaggt agcactgccg gctcagatgc caccgctggc cttggccaca cccgatccca gtcagatccc gatgcagatg caagtgcagc tgccgggcca ggcggacctt atgaatgcac aactgccgcc agaaatacac gggaagttgc ccacgtacga ggaggttcaa atggaaaagt cgctgaacgg agagctgccg cccgcctttt tgactttacc ctcctcgcag cagctaccgc cgccgccgaa tccgctactg ccgccaaatc cgctgcgcga tggatccgct gctgtgcgat ctgcccagcc ggcactcacg ttcatcgcca tcgatgccag cgatccggaa aatagtctgt ccaccaccga caacttgctc ggcacggaca tcatgttcat cacggccttc attgtggccc ttttgtttaa ctggatcggc ttcctgatgc tcacctgttt ctgtcacaca atcgccgccc gatatggagc attgtcggga ttcggattgt cnctgggtaa atggacgctg atngtgaagc actcgacggg ncttggcctc gcacgaaaaa ctcctggctc tggtggctga tctgtgcctt tggcttcctg ataagcatac gcgcnttann cagtatgtca gcattaaagc nnatcgttgg Database: dmel_all_transcript_r320 >CG32177-RA type=mRNA; loc= 3L:complement (17596318..17598125,17602871..17603155); Genome Map ID=CG32177-RA; name=CG32177-RA; db_xref='CG32177,FlyBase:FBgn0052177'; len=2093 Length = 2093 Score = 1265 bits (658), Expect = 0.0 Identities = 699/715 (97%), Gaps = 3/715 (0%) Strand = Plus / Plus Query: 1 gatgatcagttgggaccgccaaaggcggacttcagtgctccgccaccgcacgaggcgaac 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 318 gatgatcagttgggaccgccaaaggcggacttcagtgctccgccaccgtacgaggcgaac 377 Query: 61 gttggccatggccagcaggtagcactgccggctcagatgccaccgctggccttggccaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gttggccatggccagcaggtagcactgccggctcagatgccaccgctggccttggccaca 437 Query: 121 cccgatcccagtcagatcccgatgcagatgcaagtgcagctgccgggccaggcggacctt 180 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 438 cccgatcccagtcagatcccgatacagatgcaagtgcagctgccgagccaggcggacctt 497 Query: 181 atgaatgcacaactgccgccagaaatacacgggaagttgcccacgtacgaggaggttcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 atgaatgcacaactgccgccagaaatacacgggaagttgcccacgtacgaggaggttcaa 557 Query: 241 atggaaaagtcgctgaacggagagctgccgcccgcctttttgactttaccctcctcgcag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 atggaaaagtcgctgaacggagagctgccgcccgcctttttgactttaccctcctcgcag 617 Query: 301 cagctaccgccgccgccgaatccgctactgccgccaaatccgctgcgcgatggatccgct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 618 cagctaccgccgccgccgaatccgctactgccgccaaatccgctgcgcgatggagccgct 677 Query: 361 gctgtgcgatctgcccagccggcactcacgttcatcgccatcgatgccagcgatccggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 gctgtgcgatctgcccagccggcactcacgttcatcgccatcgatgccagcgatccggaa 737 Query: 421 aatagtctgtccaccaccgacaacttgctcggcacggacatcatgttcatcacggccttc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 aatagtctgtccaccaccgacaacttgctcggcacggacatcatgttcatcacggccttc 797 Query: 481 attgtggcccttttgtttaactggatcggcttcctgatgctcacctgtttctgtcacaca 540 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 attgtggcctttttgtttaactggatcggcttcctgatgctcacctgtttctgtcacaca 857 Query: 541 atcgccgcccgatatggagcattgtcgggattcggattgtcnctgggtaaatggacgctg 600 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 858 atcgccgcccgatatggagcattgtcgggattcggattgtcgctggctaaatggacgctg 917 Query: 601 atngtgaagcactcgacgggncttggcctcgcacgaaaaactcctggctctggtggctga 660 || |||||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 918 atcgtgaagcactcgac-ggacttggcctcgcacg-aaaactcctggctctggtggctga 975 Query: 661 tctgtgcctttggcttcctgataagcatacgcgcntt-anncagtatgtcagcat 714 |||||||||||||||||||||| ||||||||||| || | |||||||||||||| Sbjct: 976 tctgtgcctttggcttcctgatcagcatacgcgctttaatacagtatgtcagcat 1030 \# anon- EST:Liang-2.2 = CG15154 >anon- EST:Liang-2.2 gagtcagcaa tatgttgtcg gcgggaacgc aacacagcag caagccagtt tccagaagca ataatagcaa cagttgctgc cgcagtcgca gcagtaaagc actttcaatg ggagcagcaa catcctccgc ctccggatcc gcatccacat ccgtgtccac atccacatcc tcgaagcgac gatgctgcaa gtgcaagtgc cgcgacgcca tccgaggatt aagggatatg ctgccgagca gcagcagttc cgtgagcaat aaaaaggatg ccgctgcggt ggtggcgatg gttccgagga aatcccggac agctgaccgc cgctccacac cgcccacgct gggcacatcg agtggtggct cacagcgccg gatgcagagc caaaggatac gaaattccgt cgccgttccg gacgccagtc atcaccatca tcaagctcat cattcggatc acatcgccgg gcttcgtggt cgagtcgccc aatggcggcc gcgtaactgt ggtcaccgag cccgcccccc agtcgcccag actccgcccc ggccacgtcc cctggccacg gtcgcccccg tcggaggggc tggccatgcc ggaatcggag ccgcccgcaa catgaccgnt gcactcgcaa aatcgacttc atgcactgcc tggttnccga tttcgagaag attaacgaan agcaagcttc taacgggggg caanatggcc cgcttaccaa ggnggggcaa cntggt Database: dmel_all_transcript_r320 >CG15154-RB type=mRNA; loc= 2L:complement (18116751..18117927,18117979..18118237, 18118526..18119333,18119827..18120663, 18130123..18130493); ID=Socs36E-RB; name=Socs36E-RB; db_xref='CG15154,FlyBase:FBgn0041184'; len=3452 Length = 3452 Genome Map Score = 1210 bits (629), Expect = 0.0 Identities = 664/672 (98%), Gaps = 4/672 (0%) Strand = Plus / Plus Query: 2 agtcagcaatatgttgtcggcgggaacgcaacacagcagcaagccagtttccagaagcaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 agtcagcaatatgttgtcggcgggaacgcaacacagcagcaagccagtttccagaagcaa 1221 Query: 62 taatagcaacagttgctgccgcagtcgcagcagtaaagcactttcaatgggagcagcaac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 taatagcaacagttgctgccgcagtcgcagcagtaaagcactttcaatgggagcagcaac 1281 Query: 122 atcctccgcctccggatccgcatccacatccgtgtccacatccacatcctcgaagcgacg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 atcctccgcctccggatccgcatccacatccgtgtccacatccacatcctcgaagcgacg 1341 Query: 182 atgctgcaagtgcaagtgccgcgacgccatccgaggattaagggatatgctgccgagcag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 atgctgcaagtgcaagtgccgcgacgccatccgaggattaagggatatgctgccgagcag 1401 Query: 242 cagcagttccgtgagcaataaaaaggatgccgctgcggtggtggcgatggttccgaggaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 cagcagttccgtgagcaataaaaaggatgccgctgcggtggtggcgatggttccgaggaa 1461 Query: 302 atcccggacagctgaccgccgctccacaccgcccacgctgggcacatcgagtggtggctc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 atcccggacagctgaccgccgctccacaccgcccacgctgggcacatcgagtggtggctc 1521 Query: 362 acagcgccggatgcagagccaaaggatacgaaattccgtcgccgttccggacgccagtca 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1522 acagcgccggatgcagagccaaaggatacgaaattccgtcgccgttccggacgccagcca 1581 Query: 422 tcaccatcatcaagctcatcattcggatcacatcgccgggcttcgtggtcgagtcgccca 481 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1582 tcaccatcatc-agctcatcattcggatcacatcgccgggcttcgtggtcgagtcgccca 1640 Query: 482 atggcggccgcgtaactgtggtcaccgagcccgccccccagtcg-cccagactccgcccc 540 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1641 atggcggccgcgtaactgtggtcaccgagcccgccccccagtcgccccagactccgcccc 1700 Query: 541 ggccacgtcccctggccacggtcgcccccgtcggaggggctggccatgccggaatcggag 600 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1701 ggccacgtcccctggccacggtcgcccccgccggaggggctggccatgccggaatcggag 1760 Query: 601 ccgcccgcaacatgaccgntgcactcgcaaaatcgacttcatgcactgcctggttnccga 660 |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| Sbjct: 1761 ccgcccgcaacatgaccg-tgcactcgc-aaatcgacttcatgcactgcctggttcccga 1818 Query: 661 tttcgagaagat 672 | |||||||||| Sbjct: 1819 tctcgagaagat 1830 \# anon- EST:Liang-2.23 = roo element >anon- EST:Liang-2.23 tgnaattaat ccaaaaacta aaaggatcaa ttgacaatat aatggagatc tatgcttgga gtgattccac gattacctta gcatggatta acagtggtca aagtaagatc aaatttataa aaagaagaac ggatgacatt cggaaattaa aaaatactga atggaatcat gttaagtcag aggataatcc agcagattta gcatccaggg gagtggattc taaccagttg atcaactgtg atttttggtg gaaaggtccg aaatggctag cagacccaaa agaactttgg cctcggcagc agtctgtaga agaacctgtc ttaataaata cggtattaaa tgacaaaata gatgatccta tttacgaatt aatagaaagg tattccagta tagaaaaact tatacgtata atagcataca taaatagatt cgtgcagatg aaaacaagaa ataaagccta ttcatcaatt atttcagtaa aggagataag aatagcggaa acagttgtta ttaagaaaca acaagaatac cagtttaggc aagagataaa gtgccttaaa atcaaaaagg aaatcaagac aaatataaaa tattgtcatt gaatccattt ttggacaagg gatggggttc taaganttgg aggaagattg caaaattcca atgcagaatt taatggttaa acatccaatn cattttagaa aaaatgccan ctaacaagct tantaaataa aaaatgcnca t Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003418 |gb|AE003418| arm:X 288957..603388 estimated- cyto:1B9-1D1 gadfly- seqname:AE003418 seq_release:3 Length = 314432 Score = 1308 bits (680), Expect = 0.0 Genome Map Identities = 728/739 (98%), Gaps = 6/739 (0%) Strand = Plus / Plus Query: 4 aattaatccaaaaactaaaaggatcaattgacaatataatggagatctatgcttggagtg 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300791 aattaatccaaagactaaaaggatcaattgacaatataatggagatctatgcttggagtg 300850 Query: 64 attccacgattaccttagcatggattaacagtggtcaaagtaagatcaaatttataaaaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300851 attccacgattaccttagcatggattaacagtggtcaaagtaagatcaaatttataaaaa 300910 Query: 124 gaagaacggatgacattcggaaattaaaaaatactgaatggaatcatgttaagtcagagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300911 gaagaacggatgacattcggaaattaaaaaatactgaatggaatcatgttaagtcagagg 300970 Query: 184 ataatccagcagatttagcatccaggggagtggattctaaccagttgatcaactgtgatt 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300971 ataatccagcagatttagcatccaggggagtggattctaaccagttgatcaactgtgatt 301030 Query: 244 tttggtggaaaggtccgaaatggctagcagacccaaaagaactttggcctcggcagcagt 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301031 tttggtggaaaggtccgaaatggctagcagacccaaaagaactttggcctcggcagcagt 301090 Query: 304 ctgtagaagaacctgtcttaataaatacggtattaaatgacaaaatagatgatcctattt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301091 ctgtagaagaacctgtcttaataaatacggtattaaatgacaaaatagatgatcctattt 301150 Query: 364 acgaattaatagaaaggtattccagtatagaaaaacttatacgtataatagcatacataa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301151 acgaattaatagaaaggtattccagtatagaaaaacttatacgtataatagcatacataa 301210 Query: 424 atagattcgtgcagatgaaaacaagaaataaagcctattcatcaattatttcagtaaagg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301211 atagattcgtgcagatgaaaacaagaaataaagcctattcatcaattatttcagtaaagg 301270 Query: 484 agataagaatagcggaaacagttgttattaagaaacaacaagaataccagtttaggcaag 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301271 agataagaatagcggaaacagttgttattaagaaacaacaagaataccagtttaggcaag 301330 Query: 544 agataaagtgccttaaaatcaaaaaggaaatcaagacaaat-ataaaatattgtcattga 602 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 301331 agataaagtgccttaaaatcaaaaaggaaatcaagacaaataataaaatattgtcattga 301390 Query: 603 atccatttttggacaagggatggggttctaaganttggaggaagattgcaaaattccaat 662 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301391 atccatttttggacaa-ggatggggttctaagagttggaggaagattgcaaaattccaat 301449 Query: 663 gcagaatttaatggttaaacatccaatncattttagaaaaaatgccanctaacaagctta 722 |||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||| Sbjct: 301450 gcagaatttaat-gttaaacatccaat-cattttag-aaaaatgccacctaacaagctta 301506 Query: 723 ntaaataaaaaatgcncat 741 | |||||||||||| ||| Sbjct: 301507 tt-aataaaaaatgctcat 301524 Database: dmel_all_transposon_r320 Score E Sequences producing significant alignments: (bits) Value FBti0019658 type=transposable_element; loc= X:20509196..20516740 ;... 1308 0.0 FBti0019083 type=transposable_element; loc= X:complement (18688083... 1308 0.0 FBti0019068 type=transposable_element; loc= X:complement (16071742... 1308 0.0 FBti0019060 type=transposable_element; loc= X:14667929..14677127 ;... 1308 0.0 FBti0019051 type=transposable_element; loc= X:13835738..13844829 ;... 1308 0.0 FBti0019630 type=transposable_element; loc= X:11474279..11481367 ;... 1308 0.0 FBti0019597 type=transposable_element; loc= X:6865677..6874777 ; I... 1308 0.0 FBti0019576 type=transposable_element; loc= X:4731680..4736379 ; I... 1308 0.0 FBti0019561 type=transposable_element; loc= X:complement (3365404.... 1308 0.0 FBti0019556 type=transposable_element; loc= X:complement (3251584.... 1308 0.0 FBti0019553 type=transposable_element; loc= X:complement (2976997.... 1308 0.0 FBti0019547 type=transposable_element; loc= X:complement (2580615.... 1308 0.0 FBti0019544 type=transposable_element; loc= X:2156665..2164959 ; I... 1308 0.0 FBti0019532 type=transposable_element; loc= X:821248..829985 ; ID=... 1308 0.0 FBti0019526 type=transposable_element; loc= X:585093..592827 ; ID=... 1308 0.0 FBti0020394 type=transposable_element; loc= 3R:complement (2770289... 1308 0.0 FBti0019450 type=transposable_element; loc= 3R:24573429..24578987 ... 1308 0.0 FBti0019439 type=transposable_element; loc= 3R:22822547..22831625 ... 1308 0.0 FBti0019435 type=transposable_element; loc= 3R:complement (2219146... 1308 0.0 FBti0019432 type=transposable_element; loc= 3R:21647833..21656956 ... 1308 0.0 FBti0019431 type=transposable_element; loc= 3R:complement (2154097... 1308 0.0 FBti0019421 type=transposable_element; loc= 3R:19651837..19660930 ... 1308 0.0 FBti0019416 type=transposable_element; loc= 3R:complement (1805623... 1308 0.0 FBti0019406 type=transposable_element; loc= 3R:complement (1598248... 1308 0.0 FBti0019374 type=transposable_element; loc= 3R:10020224..10029315 ... 1308 0.0 FBti0019357 type=transposable_element; loc= 3R:complement (7205031... 1308 0.0 FBti0020187 type=transposable_element; loc= 3L:21223479..21232579 ... 1308 0.0 etc ect \# anon- EST:Liang-2.24 == CG11525 \# anon- EST:Liang-2.28 = CG2210 >anon- EST:Liang-2.28 gattcttttc tgtaatctcg gcgacaatgg cggctaacaa ggagaggact ttcatcatgg tcaagcccga tggcgtccag cgcgggctcg tcggcaagat catcgagcgc ttcgagcaga agggcttcaa gctggtcgcc ctgaagttca cctgggcctc caaggagctg ctggagaagc actacgctga tctgtccgcc cgccccttct tccccggact cgtgaactac atgaactccg gccccgtggt gcccatggtg tgggagggtc tgaatgtggt caagaccggt cgccagatgc tcggcgccac caaccccgcc gactcgctgc ccggcaccat ccgcggtgac ttctgcattc aggtcggacg caacatcatc cacggctccg atgccgtcga gtctgccgan aaggagatcg ccctgtggtt caacgaaaan gagctggtca cctggacccc ggccgccaag gactggatct acgaatagac ggctacttta actgtctgcc ctcgtctaag ctgaatacag attgattctt ctaaagaaat aaaattccac aataattact aanaaannnn aaanaaacan ntgctgcggc cgccgaaant ccggtcccct aaaagtnagt cgtattaant tcgataagcc angcttgcat taaatgaant cgggccaacn cccgggggaa aagcgggttt gcgtattggg gcgctcnncc nctttcctcc gctcaatgan ctcgctggcg cncgggtt Database: dmel_all_ >CG2210-RA type=mRNA; loc= 3R:complement (27560260..27560678, 27560858..27561121); ID=awd-RA; name=awd-RA; db_xref='CG2210,FlyBase:FBgn0000150'; len=683 Length = 683 Genome Map Score = 1088 bits (566), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 2 attcttttctgtaatctcggcgacaatggcggctaacaaggagaggactttcatcatggt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 attcttttctgtaatctcggcgacaatggcggctaacaaggagaggactttcatcatggt 170 Query: 62 caagcccgatggcgtccagcgcgggctcgtcggcaagatcatcgagcgcttcgagcagaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 caagcccgatggcgtccagcgcgggctcgtcggcaagatcatcgagcgcttcgagcagaa 230 Query: 122 gggcttcaagctggtcgccctgaagttcacctgggcctccaaggagctgctggagaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 gggcttcaagctggtcgccctgaagttcacctgggcctccaaggagctgctggagaagca 290 Query: 182 ctacgctgatctgtccgcccgccccttcttccccggactcgtgaactacatgaactccgg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 ctacgctgatctgtccgcccgccccttcttccccggactcgtgaactacatgaactccgg 350 Query: 242 ccccgtggtgcccatggtgtgggagggtctgaatgtggtcaagaccggtcgccagatgct 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ccccgtggtgcccatggtgtgggagggtctgaatgtggtcaagaccggtcgccagatgct 410 Query: 302 cggcgccaccaaccccgccgactcgctgcccggcaccatccgcggtgacttctgcattca 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 cggcgccaccaaccccgccgactcgctgcccggcaccatccgcggtgacttctgcattca 470 Query: 362 ggtcggacgcaacatcatccacggctccgatgccgtcgagtctgccganaaggagatcgc 421 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 471 ggtcggacgcaacatcatccacggctccgatgccgtcgagtctgccgagaaggagatcgc 530 Query: 422 cctgtggttcaacgaaaangagctggtcacctggaccccggccgccaaggactggatcta 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 cctgtggttcaacgaaaaggagctggtcacctggaccccggccgccaaggactggatcta 590 Query: 482 cgaatagacggctactttaactgtctgccctcgtctaagctgaatacagattgattcttc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 cgaatagacggctactttaactgtctgccctcgtctaagctgaatacagattgattcttc 650 Query: 542 taaagaaataaaattccacaataattacta 571 |||||||||||||||||||||||||||||| Sbjct: 651 taaagaaataaaattccacaataattacta 680 \# anon- EST:Liang-2.31 = not in genome >anon- EST:Liang-2.31 aannncntta agctgtagtg agcnagtaaa atgtnagnan ttggagnact tnagtgnaat aatcgtnatt cctgtnanaa gg Database: na_all.dros Only self hit Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 2,262,611 sequences; 10,883,439,008 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs No significant similarity found. For reasons why, click here. \# anon- EST:Liang-2.39 = in how intron ? >anon- EST:Liang-2.39 acttattttg cagccaaatc taaaaatcag atcaaatcta tcgaatacac aagcgcatat ataaacgact cattccaaag aagcagagaa tttaaatgtt acaaagtgaa atagaataca gaatacgana aacaggtcga taattccccc tcagttggna atttggcttc naagctgctg ccttcagctt cagtttgang caagcgaatg gtagataagt aaggangtat gcaatatcta ttagacctaa gttgtaacct gtatctgang atgttcacat cnatttannc atatnaccga natgtanacc tatgnaancc antatctaca tgtntcntat cgtaatnntt tagtatngcg ccantaagca gcagcntcgt ttggcgacta nccgcgagca nccctatcag ncgancaacn gtcgggntgc caagccanng cccggcgggt ttcaattgag antacagtng atncnatgnn tngcttgaat tgganganaa ttcngncgca ntagtaantc agnacnttnn ccactcntan gancacacca ctntttggca aaaag Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003737 |gb|AE003737| arm:3R 17772253..17950503 estimated- cyto:93F10-94A2 gadfly- seqname:AE003737 seq_release:3 Length = 178251 Score = 631 bits (328), Expect = e-180 Genome Map Identities = 397/432 (91%), Gaps = 5/432 (1%) Strand = Plus / Plus Query: 1 acttattttgcagccaaatctaaaaatcagatcaaatctatcgaatacacaagcgcatat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118533 acttattttgcagccaaatctaaaaatcagatcaaatctatcgaatacacaagcgcatat 118592 Query: 61 ataaacgactcattccaaagaagcagagaatttaaatgttacaaagtgaaatagaataca 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118593 ataaacgactcattccaaagaagcagagaatttaaatgttacaaagtgaaagagaataca 118652 Query: 121 gaatacganaaacaggtcgataattccccctcagttggnaatttggcttcnaagctgctg 180 |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 118653 gaatacgaaaaacaggtcgataattccccctcagttggcaatttggcttcc-agctgctg 118711 Query: 181 ccttcagcttcagtttgangcaagcgaatggtagataagtaaggangtatgcaatatcta 240 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 118712 ccttcagcttcagtttga-gcaagcgaatggtagataagtaaggatgtatgcaatatcta 118770 Query: 241 ttagacctaagttgtaacctgtatctgangatgttcacatcnatttanncatatnaccga 300 |||||||||||||||| |||||| |||| |||||||||||| ||||| ||||| ||||| Sbjct: 118771 ttagacctaagttgtaccctgtagctgatgatgttcacatctatttatacatataaccga 118830 Query: 301 natgtanacctatgnaanccantatctacatgtntcntatcgtaatnntttagtatngcg 360 ||||| ||||||| || ||| ||||||||||| || |||||| || ||||||| ||| Sbjct: 118831 tatgtaaacctatgcaaaccaatatctacatgtatcgtatcgt-atattttagta-ggcg 118888 Query: 361 ccantaagcagcagcntcgtttggcgactanccgcgagcanccctatcagncgancaacn 420 ||| ||||||||||| |||||||||||||| ||||||||| ||||||||| ||| |||| Sbjct: 118889 ccattaagcagcagcgtcgtttggcgactaaccgcgagcatccctatcag-cgagcaacg 118947 Query: 421 gtcgggntgcca 432 ||||| ||||| Sbjct: 118948 gtcggagtgcca 118959 \# anon- EST:Liang-2.40 = no sequence data available \# anon- EST:Liang-2.41 = CG32662 >anon- EST:Liang-2.41 tgaaagctaa aagagaaaga gagggctgaa aagcttaaag acctagaaaa agaantaaag ctaaaggaaa aggaggaaca gctcaaggag aaggaaaagg agcttaaact caaggagaag aaggagaaag acaaggtcaa agagaaggag aagtccctgg aaagcgaaaa gctcctcatc tcggcaaccg ttagcaatcc atggaggcga gtcgtcnagg atactccacc caaactgcct gcggttcagg actatcccan ccttggcaag aagcccacta aagcgagtcc ggagaagaag cgggatgaaa aactgctgcc tggactgact actcccccca aagaggtgaa cgacaccttt gaggacttct tgagcggctt aaagccactg gaggccttgc nanctctccc tgctctcgaa cccctggagg ttaangagga ctcnaaaaag gaatctgtca gtctaatcaa ctttgaaagt ccgttgcang agacaagctt cnataccgcg gaagatttcc caccgccacg tggtttcacc gaaacagaat ttgnttcctc gcccttgttg cggttccctt gcactatgaa anatnaacag ggaacgcatc cgggggaaan gganggccga aattgcancc ctganggtgg gtaanaaaca ccgggaaacc ggttanacan ttaccctngg ananncnggg nnccngnann naatcaactc cnaaatcgaa ananctccnc cgggatttga gggaaatttt tcgtncatnt g Database: dmel_all_transcript_r320 >CG32662-RA type=mRNA; loc= X:11560075..11564160 ; ID=CG32662-RA; Genome Map name=CG32662-RA; db_xref='CG32662,FlyBase:FBgn0052662'; len=4086 Length = 4086 Score = 760 bits (395), Expect = 0.0 Identities = 468/487 (96%), Gaps = 9/487 (1%) Strand = Plus / Plus Query: 129 agacaaggtcaaagagaaggagaagtccctggaaagcgaaaagctcctcatctcggcaac 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2205 agacaaggtcaaagagaaggagaagtccctggaaagcgaaaagctcctcatctcggcaac 2264 Query: 189 cgttagcaatccatggaggcgagtcgtcnaggatactccacccaaactgcctgcggttca 248 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2265 cgttagcaatccatggaggcgagtcgtcgaggatactccacccaaactgcctgcggttca 2324 Query: 249 ggactatcccanccttggcaagaagcccactaaagcgagtccggagaagaagcgggatga 308 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2325 ggactatcccagccttggcaagaagcccactaaagcgagtccggagaagaagcgggatga 2384 Query: 309 aaaactgctgcctggactgactactccccccaaagaggtgaacgacacctttgaggactt 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2385 aaaactgctgcctggactgactactccccccaaagaggtgaacgacacctttgaggactt 2444 Query: 369 cttgagcggcttaaagccactggaggccttgcnanctctccctgctctcgaacccctgga 428 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 2445 cttgagcggcttaaagccactggaggccttgccacctctccctgctctcgaacccctgga 2504 Query: 429 ggttaangaggactcnaaaaaggaatctgtcagtctaatcaactttgaaagtccgttgca 488 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2505 ggttaaggaggactcgaaaaaggaatctgtcagtctaatcaactttgaaagtccgttgca 2564 Query: 489 ngagacaagcttcnataccgcggaagattt-cccaccgccacgtggtttcaccgaaacag 547 ||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 2565 ggagac-agcttccataccgcggaagatttccccaccgccacgtggtttcaccg-aacag 2622 Query: 548 aatttgnttcctcgcccttgttgcggttcccttgcactatgaaanatnaacagggaacgc 607 |||||| |||||| ||||| |||||||||| |||||||||||| || |||| ||||||| Sbjct: 2623 aatttga-tcctcg-ccttg-tgcggttccc-tgcactatgaaa-atgaaca-ggaacgc 2676 Query: 608 atccggg 614 ||||||| Sbjct: 2677 atccggg 2683 \# anon- EST:Liang-2.42 = CG5014 >anon- EST:Liang-2.42 taagaaaaaa agagagacga gtaaagtaaa acgaaacagg cataaaaaca gcagcagttt tcttgatata tttggctaaa aaacgcaaac caaacagcca gcaagaacaa caaatagctg ggcaaaaaca ggacgcacaa aaaataaaat taaaacgata agaggcgaaa agcggagaga gtgaaattct cggcagcaac aacgacaaga acaacaccag gagcagcagc aacaacaaca acaacaaaag ccagccgcca caatgagcaa atcactcttt gatcttccgt tgaccattga accagaacat gagttgcgtt ttgtgggtcc cttcacccga cccgttgtca caatcatgac tctgcgcaac aactcggctc tgcctctggt cttcaagatc aagacaaccg ccccgaaacg ctactgcgta cgtccaaaca tcggcaagat aattcccttt cgatcaaccc aggtggagat ctgccttcag ccattcgtct acgattnagc aggagaagaa caagcacaag ttcatggtgc agagcgtcct ggcacccaat ggatgctgat ctaagcgatt taaataaatt gtggaaagga tctgganccc gnagcagctg gatgggacgn caaactgaaa gtgcgttttc nagatgnccc acngctgaag gcaaatgctg agaacaccaa cgggttggtg gtgccgttgg cggggggaac cgggagcaan gcngaaacct ctccat Database: dmel_all_transcript_r320 >CG5014-33-1-RC type=mRNA; loc= X:join (3690044..3690329,3692031..3692183, 3692252..3692361,3692445..3692657,3692724..3692837, 3693383..3694721); ID=Vap-33-1-RC; name=Vap-33-1-RC; db_xref='CG5014,FlyBase:FBgn0029687'; len=2215 Length = 2215 Genome Map Score = 712 bits (370), Expect = 0.0 Identities = 449/466 (96%), Gaps = 11/466 (2%) Strand = Plus / Plus Query: 248 aagccagccgccacaatgagcaaatcactctttgatcttccgttgaccattgaaccagaa 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 aagccagccgccacaatgagcaaatcactctttgatcttccgttgaccattgaaccagaa 267 Query: 308 catgagttgcgttttgtgggtcccttcacccgacccgttgtcacaatcatgactctgcgc 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 catgagttgcgttttgtgggtcccttcacccgacccgttgtcacaatcatgactctgcgc 327 Query: 368 aacaactcggctctgcctctggtcttcaagatcaagacaaccgccccgaaacgctactgc 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 aacaactcggctctgcctctggtcttcaagatcaagacaaccgccccgaaacgctactgc 387 Query: 428 gtacgtccaaacatcggcaagataattccctttcgatcaacccaggtggagatctgcctt 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gtacgtccaaacatcggcaagataattccctttcgatcaacccaggtggagatctgcctt 447 Query: 488 cagccattcgtctacgattnagcaggagaagaacaagcacaagttcatggtgcagagcgt 547 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 448 cagccattcgtctacga-tcagcaggagaagaacaagcacaagttcatggtgcagagcgt 506 Query: 548 cctggcacccaatggatgctgatctaagcgatttaaataaattgtggaaaggatctggan 607 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 507 cctggcaccc-atggatgctgatctaagcgatttaaataaattgtgg-aaggatctggag 564 Query: 608 cccgnagcagctggatgggacgncaaactgaaagtgcgttttcnagatgncccacngctg 667 |||| ||||||| ||| ||||| ||||||| |||||||||||| ||||| ||||| |||| Sbjct: 565 cccg-agcagct-gat-ggacgccaaactg-aagtgcgttttcgagatg-cccaccgctg 619 Query: 668 aaggcaaatgctgagaacaccaacgggttggtggtgccgttggcgg 713 ||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 620 \-aggcaaatgctgagaacaccagcgg--tggtggtgccgttggcgg 662 \# anon- EST:Liang-2.47 = CG1499 >anon- EST:Liang-2.47 gagttattcg gtcaactctc gacggtcaag ctcgcagcga tctcgcgact tggcaaccaa aaaataattc acaaaagcac cgaatcgcgt tacaaggaac tttagtccgc ggctttgtcg aggagcaacc tgccagcaaa gtcaagtgca acattcaata cccaccgatg tgcaatgtgt gtaatcagca aacagtgatc atttacatac atgaataaaa ctcatctcga aagtgaagcg tgactcagca tcgatagccg aaaaaggcag gagaacaaga caatccgaaa ggaaaggata cttttcggtc acttccaaaa ctcacgaccc caagttacag ttgcagttgc aaaatattct ggccaaatac aacgacgaca agacccgatc tgaagtttta gaggattgaa gacacgagag caaacagtta agacaaaatg tttctacgcc gctgcactct actgntgctg atntgcctaa ttgcgaatga cgccgccagc gccgcacgca aaacaaaagc gtcccgtcaa agccggtcaa acagancaat ccgcgcaaca atgtaacgcc ttcgccgccg ntgtcgcctc atcnggggta gttccacaac ccgccagaac cagnaagcac caccaacnac nggagggaan cnggngaacc aagaanggtg ggcanaatcc ggattttgca gccctanccg gggggcgggg aaaatgcccn aannctccgg ggnaagncca atcgnagggg ncaacccggg ggggaaa Database: dmel_all_transcript_r320 >CG1499-RA type=mRNA; loc= 3R:join (27358120..27358615,27364375..27364440, 27373215..27373596,27374317..27374477, 27375090..27375291,27375622..27375873, 27375940..27376883,27377035..27377238, 27377318..27377401,27380199..27381255); ID=CG1499-RA; name=CG1499-RA; db_xref='CG1499,FlyBase:FBgn0039852'; len=3848 Length = 3848 Genome Map Score = 1063 bits (553), Expect = 0.0 Identities = 616/635 (97%), Gaps = 7/635 (1%) Strand = Plus / Plus Query: 2 agttattcggtcaactctcgacggtcaagctcgcagcgatctcgcgacttggcaaccaaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 agttattcggtcaactctcgacggtcaagctcgcagcgatctcgcgacttggcaaccaaa 191 Query: 62 aaataattcacaaaagcaccgaatcgcgttacaaggaactttagtccgcggctttgtcga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 192 aaataattcacaaaagcaccgaatcgcgttacaaggaactttagtccgcggctttgacga 251 Query: 122 ggagcaacctgccagcaaagtcaagtgcaacattcaatacccaccgatgtgcaatgtgtg 181 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ggagcaacctaccagcaaagtcaagtgcaacattcaatacccaccgatgtgcaatgtgtg 311 Query: 182 taatcagcaaacagtgatcatttacatacatgaataaaactcatctcgaaagtgaagcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 taatcagcaaacagtgatcatttacatacatgaataaaactcatctcgaaagtgaagcgt 371 Query: 242 gactcagcatcgatagccgaaaaaggcaggagaacaagacaatccgaaaggaaaggatac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gactcagcatcgatagccgaaaaaggcaggagaacaagacaatccgaaaggaaaggatac 431 Query: 302 ttttcggtcacttccaaaactcacgaccccaagttacagttgcagttgcaaaatattctg 361 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 ttttcggtcacttccagaactcacgaccccaagttacagttgcagttgcaaaatattctg 491 Query: 362 gccaaatacaacgacgacaagacccgatctgaagttttagaggattgaagacacgagagc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gccaaatacaacgacgacaagacccgatctgaagttttagaggattgaagacacgagagc 551 Query: 422 aaacagttaagacaaaatgtttctacgccgctgcactctactgntgctgatntgcctaat 481 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 552 aaacagttaagacaaaatgtttctacgccgctgcactctactgctgctgatctgcctaat 611 Query: 482 tgcgaatgacgccgccagcgccgcacgcaaaacaaaagcgtcccgtcaaagccggtcaaa 541 ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 612 tgcgagtgacgccgccagcgccgcacgcaaaac-aaagcgtcccgtc-aagccggtcaag 669 Query: 542 cagancaatccgcgcaacaatgtaacgccttcgccgcc-gntgtcgcctcatcnggggta 600 |||| ||||||||||| ||||||||||||||||||||| | |||||||||||| ||||| Sbjct: 670 cagaccaatccgcgcaccaatgtaacgccttcgccgccggctgtcgcctcatc--gggta 727 Query: 601 gttccacaacccgccagaaccagnaagcaccacca 635 ||||||| ||||||||| ||||| |||||||||| Sbjct: 728 gttccac-acccgccagcaccagc-agcaccacca 760 \# anon- EST:Liang-2.48 = CG14938 >anon- EST:Liang-2.48 aatcatgtac ggcaacatac aggcgagtcg ccgcacaagt gcacgtactg caccaagacg ttcacgcgca aggagcacct gacgaaccat gtgcgccagc acacgggcga ctccccgcac cgctgctcct actgcaagaa gaccttcacg cgcaaggagc acctgacgaa ccatgtgcgc ctgcacacgg gcgactcgcc gcacaagtgc gagtactgcc agaagacgtt tacgcggaag gagcacctga acaatcatat gcgccagcat tcgagcgaca atccgcattg ctgcaacgtt tgcaacaagc cgtttacgcg caaggaacac ctgatcaacc atatgtcgcg gtgccacacc ggtgaccggc ccttcacctg cgagacgtgc ggcaaatcgt tcccgctcaa gggcaatctg ctcttccatc agcgcagcca taccaagggc caggaagatg gagcggccat tcgcctgcga gaagtgcccc aagaacttca tctgcaaagg tcacttggtc tcgcacatgc gctcccattc gggtgagaaa ccacacgcgt gcacactgtg caacaaggng ttcgtcnagc cgcggcaatt tgaagcgcca catgaangat tgaatcaccc ggattgctat gntnccgnca ccaacccgtn gaatccgcat tccgcaaata ccggntggtt gtgctgacgc aagtcaagca nggaagtgaa aaccgattat tantttccca tcactctg Database: dmel_all_transcript_r320 >CG14938-RC type=mRNA; loc= 2L:complement (11783198..11786612,11786700..11786912, 11787536..11788273,11789026..11789193,11791776..11792545, 11792656..11792769,11794919..11795028, 11796885..11797843); ID=crol-RC; name=crol-RC; db_xref='CG14938,FlyBase:FBgn0020309'; len=6487 Length = 6487 Genome Map Score = 1194 bits (621), Expect = 0.0 Identities = 720/746 (96%), Gaps = 12/746 (1%) Strand = Plus / Plus Query: 1 aatcatgtacggcaacatacaggcgagtcgccgcacaagtgcacgtactgcaccaagacg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2352 aatcatgtacggcaacatacaggcgagtcgccgcacaagtgcacgtactgcaccaagacg 2411 Query: 61 ttcacgcgcaaggagcacctgacgaaccatgtgcgccagcacacgggcgactccccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2412 ttcacgcgcaaggagcacctgacgaaccatgtgcgccagcacacgggcgactccccgcac 2471 Query: 121 cgctgctcctactgcaagaagaccttcacgcgcaaggagcacctgacgaaccatgtgcgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2472 cgctgctcctactgcaagaagaccttcacgcgcaaggagcacctgacgaaccatgtgcgc 2531 Query: 181 ctgcacacgggcgactcgccgcacaagtgcgagtactgccagaagacgtttacgcggaag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2532 ctgcacacgggcgactcgccgcacaagtgcgagtactgccagaagacgtttacgcggaag 2591 Query: 241 gagcacctgaacaatcatatgcgccagcattcgagcgacaatccgcattgctgcaacgtt 300 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2592 gagcacctcaacaatcatatgcgccagcattcgagcgacaatccgcattgctgcaacgtt 2651 Query: 301 tgcaacaagccgtttacgcgcaaggaacacctgatcaaccatatgtcgcggtgccacacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2652 tgcaacaagccgtttacgcgcaaggaacacctgatcaaccatatgtcgcggtgccacacc 2711 Query: 361 ggtgaccggcccttcacctgcgagacgtgcggcaaatcgttcccgctcaagggcaatctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2712 ggtgaccggcccttcacctgcgagacgtgcggcaaatcgttcccgctcaagggcaatctg 2771 Query: 421 ctcttccatcagcgcagccataccaagggccaggaagatggagcggccattcgcctgcga 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2772 ctcttccatcagcgcagccataccaagggccagg-agatggagcggccattcgcctgcga 2830 Query: 481 gaagtgccccaagaacttcatctgcaaaggtcacttggtctcgcacatgcgctcccattc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2831 gaagtgccccaagaacttcatctgcaaaggtcacttggtctcgcacatgcgctcccattc 2890 Query: 541 gggtgagaaaccacacgcgtgcacactgtgcaacaaggngttcgtcnagccgcggcaatt 600 |||||||||||||||||||||||||||||||| ||||| ||||||| || |||||||||| Sbjct: 2891 gggtgagaaaccacacgcgtgcacactgtgcagcaaggcgttcgtcgag-cgcggcaatt 2949 Query: 601 tgaagcgccacatgaangattgaatcacccggattgctatgntnccgncaccaacccgtn 660 |||||||||||||||| ||||||||||||| ||||||| | ||| |||| |||||| Sbjct: 2950 tgaagcgccacatgaag--atgaatcacccgga-tgctatgatgccgccacc-acccgt- 3004 Query: 661 gaatccgcattccgcaaataccggntggttgtgctgacgcaagtcaagcanggaagtgaa 720 | ||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||| | Sbjct: 3005 gcatccgca-tccgcaaataccggctgg-tgtgctgacgcaagtcaagca-ggaagtg-a 3060 Query: 721 aaccgattattantttcccatcactc 746 ||||||| | || || |||||||||| Sbjct: 3061 aaccgatca-taattccccatcactc 3085 \# anon- EST:Liang-2.49 = CG3821 >anon- EST:Liang-2.49 gaagtacacg acgctcgtga aatcaattcg tttgtgtatt aaaagggcaa gatctagctg ccgtttttgt gcattccaag atggtcgagg acaaagagca agtggccaac ggggagcagg tctccaagaa gggagccaaa aagctggcca aggccgctaa gaaagcgaac aaaaagcgga gaacgcctcc accgcggcgg ccaataacgc tggtggcgat tctgcggagg atcacgccgc cggaagatat ggcctctcgg aaatgatcca atccaaggac aaacgcagtg aacgcaactt tgtcccggtt tcggaactaa gcggtcaggt gggcaaaggg ctggtctggg tgcgangacg cgtccacact tcnagagcca agggaaagca ntgcttcctc atcctgcgcc agcagagcag cacggtgcan ttgcatcctg gctgtcngtg atgttatctc caaacanatg gtcnaatttn ccgggaaana tccctaaagg ggagcattan tggatatcca angncaaacc aaattgcggt gtctaacaaa nattgaatcc tgcacaaanc aatccccngg naatntccct tcaancanat attcnttaat atcccaagnc aaaggaacaa nttnncattt caaatccaag gntncatccc gttcccnnaa aanccccttt atnccggaaa gggtctgaaa attnccgtta accanganaa accccttgtg aaaaccnatt nttntacctt aaggaccccg ncaaattaag gccatttttc caccgggaaa ccngggtttt ttt Database: dmel_all_transcript_r320 >CG3821-asp-RA type=mRNA; loc= 2R:join (7945033..7945094,7945484..7945584, 7945664..7945989,7946222..7947246,7947456..7947884); ID=Aats-asp-RA; name=Aats-asp-RA; db_xref='CG3821,FlyBase:FBgn0002069'; len=1943 Length = 1943 Genome Map Score = 881 bits (458), Expect = 0.0 Identities = 537/565 (95%), Gaps = 8/565 (1%) Strand = Plus / Plus Query: 3 agtacacgacgctcgtgaaatcaattcgtttgtgtattaaaagggcaagatctagctgcc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 agtacacgacgctcgtgaaatcaattcgtttgtgtattaaaagggcaagatctagctgcc 64 Query: 63 gtttttgtgcattccaagatggtcgaggacaaagagcaagtggccaacggggagcaggtc 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gtttttgtgcattccaagatggtcgaggacaaagagcaagtggccaacggggagcaggtc 124 Query: 123 tccaagaagggagccaaaaagctggccaaggccgctaagaaagc-gaacaaaaagcggag 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 125 tccaagaagggagccaaaaagctggccaaggccgctaagaaagccgaacaaaaagcggag 184 Query: 182 aacgcctccaccgcggcggccaataacgctggtggcgattctgcggaggatcacgccgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 aacgcctccaccgcggcggccaataacgctggtggcgattctgcggaggatcacgccgcc 244 Query: 242 ggaagatatggcctctcggaaatgatccaatccaaggacaaacgcagtgaacgcaacttt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 ggaagatatggcctctcggaaatgatccaatccaaggacaaacgcagtgaacgcaacttt 304 Query: 302 gtcccggtttcggaactaagcggtcaggtgggcaaagggctggtctgggtgcgangacgc 361 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 305 gtcccggtttcggaactaagcggtcaggtgggcaaaggactggtctgggtgcgaggacgc 364 Query: 362 gtccacacttcnagagccaagggaaagcantgcttcctcatcctgcgccagcagagcagc 421 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 365 gtccacacttcgagagccaagggaaagcagtgcttcctcatcctgcgccagcagagcagc 424 Query: 422 acggtgcanttgcatcctggctgtcngtgatgttatctccaaacanatggtcnaatttnc 481 |||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 425 acggtgcag-tgcatcctggctgtcggtgatgttatctccaaacagatggtcaaatttg- 482 Query: 482 cgggaaanatccctaaaggggagcattantggatatccaangncaaaccaaattgcggtg 541 ||||||| |||||| |||| |||||||| | |||||||| | | || | | | |||||| Sbjct: 483 cgggaaatatccct-aaggagagcattatt-gatatcca--ggccaagccagtggcggtg 538 Query: 542 tctaacaaanattgaatcctgcaca 566 |||| | || ||||||||||||||| Sbjct: 539 tctagc-aagattgaatcctgcaca 562 \# anon- EST:Liang-2.51 == CG7533 (charybde) (1-635 only; chimeric? Last 150bp not identifiable \-- het?) \# anon- EST:Liang-2.54 == CG9894 \# anon- EST:Liang-20 == CG10035 \# anon- EST:Liang-38 == CG17579 (sca) \# anon- EST:Liang-97 == CG3359 (1-468 only; chimeric cDNA? Last 300bp not identifiable \-- het?) \# Subject: Death to anon-ESTs Some more \- will start on Poseys Michael anon- EST:Gibbs1 = ? maybe new anon- EST:Gibbs2 = ? maybe new anon- EST:GressD1 == ? maybe new or junk anon- EST:GressD10 = CG9253, I think (must be ?:) anon- EST:GressD11 = ?, only self match anon- EST:GressD16 = CG6483 anon- EST:GressD4 = CG4863 anon- EST:GressD5 = CG2934 anon- EST:GressD7 = CG6667 anon- EST:Nelson1 = CG4065 anon- EST:ParkEST125 = CG4182 anon- EST:ParkEST132 = CG10992 anon- EST:ParkEST325 = CG6199 =================================== anon- EST:Gibbs1 = ? maybe new >anon- EST:Gibbs1.1 gaattcggct tcgacgggac caccttatgt tatttcatca tggcctcgac gttcgctaac agagctgagc actgttaagc ggcgcttcgt gactgtgagc cgaacgcata cgaacgacct acgccagcgc gctcaaacct gttggccaac tgagtgtgca acaaacatgt tgtgtttacg ttttttcctt ggcctaagcg gtttgagcat gttgctgtcc tccatcaaca tgttgcactt ttcgggcttg gcaacaagtg ctttttgttt ccaacttcca gatactcttt ctatttaact gtatttatgg ttgtagttat attacgccgt taattgtgaa atgttaccaa tgagtattgc atataaaaat catttaaaat ttacatatta caaactcaag ctgattttat taaaattaaa tgtatatatc taagtcctat tcaaaaaaaa aacgtatcaa cagaagctgc gtaatatatt gcttaattca aattggacat tcagccgaaa taaaaatatc tttgacagat acactaggaa gctctgacac ggcgaaaagt aggacaaaat cggttcaggg gagatggtca ttgtgggtgg acgcgttcag cggggagctg taacttttct aactggcatt tttccgcaat gattgcagtt gaacacgctg cgataaaagc taatcgaatt atgcttttgg caaatgccac aacagctgca cgaaaccagc aaaaactaac aaacaattat gggtctctca actggggcgg ggaatgggaa aatcgaatag ggggagaatg gtcaagggtg gcttataact ctgctatgtg cggcgtcatg tcaacgccca gccaagcaaa gcgaggacca aaaggagacg cagcggtttg gagtttccgg caaaaagtta gtgggcaaag gaaagagcca aaaagggatt tgtgtatgcg aaaaaatttt acaagccatt aacaaaaatg ttgcgcctcg gcatatgcca cataaaattc actcagcagc agcagcagca gcagtggtaa caatggagga gtcaggcgcc taactcaggc acacacagat ggaaagcgag tggaacggtc ggaaaataag cggcataacc gcattcccaa tacgctatcc aaaatattat agccctagaa aagggtagca tttgctcttt catcagtaga gaattatgat tatttaagaa cagataaata attaaacttt ttataataaa tgttcaacta tcaatcgctg cagcttaata tatcttctgc atatattctt tcctcatggg caggtatgta catatatgaa tggagaaaac tcaattatcc tttgtgaggg tactgaaaag agcgaaacaa agagagagac tgatgcaaaa aggaaggagg ggcgaaaagc gagtcgaatg ccaaaatgtg caatggaag Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003679 |gb|AE003679| arm:3R 4269603..4486596 estimated- cyto:85A1-85A5 gadfly- seqname:AE003679 seq_release:3 Length = 216994 Score = 2527 bits (1314), Expect = 0.0 Genome Map Identities = 1359/1397 (97%) Strand = Plus / Plus Query: 43 gcctcgacgttcgctaacagagctgagcactgttaagcggcgcttcgtgactgtgagccg 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33811 gcctcgacgttcgctaacagagctgagcactgttaagcggcgcttcgtgactgtgagccg 33870 Query: 103 aacgcatacgaacgacctacgccagcgcgctcaaacctgttggccaactgagtgtgcaac 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33871 aacgcatacgaacgacctacgccagcgcgctcaaacctgttggccaactgagtgtgcaac 33930 Query: 163 aaacatgttgtgtttacgttttttccttggcctaagcggtttgagcatgttgctgtcctc 222 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 33931 aaacatgttgtgtttacgttttttccttggcctaagcggtttgagcgtgttgctgtcctc 33990 Query: 223 catcaacatgttgcacttttcgggcttggcaacaagtgctttttgtttccaacttccaga 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 33991 catcaacatgttgcacttttcgggcttggcaacaagtgctttttgtttccaactaccaga 34050 Query: 283 tactctttctatttaactgtatttatggttgtagttatattacgccgttaattgtgaaat 342 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34051 tactctttctatttaactgtatttatggttgtagttatattatgccgttaattgtgaaat 34110 Query: 343 gttaccaatgagtattgcatataaaaatcatttaaaatttacatattacaaactcaagct 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34111 gttaccaatgagtattgcatataaaaatcatttaaaatttacatattacaaactcaagct 34170 Query: 403 gattttattaaaattaaatgtatatatctaagtcctattcnnnnnnnnnncgtatcaaca 462 |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 34171 gattttattaaaattaaatgtatatatctaagtcctattcaaaaaaaaaacgtatcaaca 34230 Query: 463 gaagctgcgtaatatattgcttaattcaaattggacattcagccgaaataaaaatatctt 522 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 34231 gaagctgcgtaatatattgcttaattcaaattggacattcagccgaaataaaaatatttt 34290 Query: 523 tgacagatacactaggaagctctgacacggcgaaaagtaggacaaaatcggttcagggga 582 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 34291 tgacagatacactaggaagctctgacacggcaaaaagtaggacaaaatcggttcagggga 34350 Query: 583 gatggtcattgtgggtggacgcgttcagcggggagctgtaacttttctaactggcatttt 642 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 34351 gatggtcattgtgggtggacgcgttcagcggggagctgtaacttttctaattggcatttt 34410 Query: 643 tccgcaatgattgcagttgaacacgctgcgataaaagctaatcgaattatgcttttggca 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34411 tccgcaatgattgcagttgaacacgctgcgataaaagctaatcgaattatgcttttggca 34470 Query: 703 aatgccacaacagctgcacgaaaccagcaaaaactaacaaacaattatgggtctctcaac 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34471 aatgccacaacagctgcacgaaaccagcaaaaactaacaaacaattatgggtctctcaac 34530 Query: 763 tggggcggggaatgggaaaatcgaatagggggagaatggtcaagggtggcttataactct 822 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 34531 tggggcggggaatgggaaaatcgaatagggggagaatgggcaagggtggcttataactct 34590 Query: 823 gctatgtgcggcgtcatgtcaacgcccagccaagcaaagcgaggaccaaaaggagacgca 882 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34591 gctatgtgcggcgtcatgtcaacgcccagccaagcaaagcgaggaccaaaaggagacgca 34650 Query: 883 gcggtttggagtttccggcaaaaagttagtgggcaaaggaaagagccaaaaagggatttg 942 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34651 gcggtttggagtttccggcaaaaagttagtgggcaaaggaaagagccaaaaagggatttg 34710 Query: 943 tgtatgcgaaaaaattttacaagccattaacaaaaatgttgcgcctcggcatatgccaca 1002 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34711 tgtatgcgaaaaaattttacaagccattaacaaaaatgttgcgcctcggcatatgccaca 34770 Query: 1003 taaaattcactnnnnnnnnnnnnnnnnnnnnntggtaacaatggaggagtcaggcgccta 1062 ||||||||||| |||||||||||||||||||||||||||| Sbjct: 34771 taaaattcactcagcagcagcagcagcagcagtggtaacaatggaggagtcaggcgccta 34830 Query: 1063 actcaggcacacacagatggaaagcgagtggaacggtcggaaaataagcggcataaccgc 1122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34831 actcaggcacacacagatggaaagcgagtggaacggtcggaaaataagcggcataaccgc 34890 Query: 1123 attcccaatacgctatccaaaatattatagccctagaaaagggtagcatttgctctttca 1182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34891 attcccaatacgctatccaaaatattatagccctagaaaagggtagcatttgctctttca 34950 Query: 1183 tcagtagagaattatgattatttaagaacagataaataattaaactttttataataaatg 1242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34951 tcagtagagaattatgattatttaagaacagataaataattaaactttttataataaatg 35010 Query: 1243 ttcaactatcaatcgctgcagcttaatatatcttctgcatatattctttcctcatgggca 1302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35011 ttcaactatcaatcgctgcagcttaatatatcttctgcatatattctttcctcatgggca 35070 Query: 1303 ggtatgtacatatatgaatggagaaaactcaattatcctttgtgagggtactgaaaagag 1362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35071 ggtatgtacatatatgaatggagaaaactcaattatcctttgtgagggtactgaaaagag 35130 Query: 1363 cgaaacaaagagagagactgatgcaaaaaggaaggaggggcgaaaagcgagtcgaatgcc 1422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35131 cgaaacaaagagagagactgatgcaaaaaggaaggaggggcgaaaagcgagtcgaatgcc 35190 Query: 1423 aaaatgtgcaatggaag 1439 ||||||||||||||||| Sbjct: 35191 aaaatgtgcaatggaag 35207 >anon- EST:Gibbs1.2 gcctcgacgt tcgctaacag agctgagcac tgttaagcgg cgcttcgtga ctgtgagccg aacgcatacg aacgacctac gccagcgcgc tcaaacctgt tggccaactg agtgtgcaac aaacatgttg tgtttacgtt ttttccttgg cctaagcggt ttgagcgtgt tgctgtcctc catcaacatg ttgcactttt cgggcttggc aacaagtgct ttttgtttcc aactaccaga tactctttct atttaactgt atttatggtt gtagttatat tatgccgtta attgtgaaat gttaccaatg agtattgcat ataaaaatca tttaaaattt acatattaca aactcaagct gattttatta aaattaaatg tatatatcta agtcctattc aaaaaaaaaa cgtatcaaca gaagctgcgt aatatattgc ttaattcaaa ttggacattc agcccgaata aaatattttt gacagatcac taggaagctc tgacacggaa aaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003679 |gb|AE003679| arm:3R 4269603..4486596 estimated- cyto:85A1-85A5 gadfly- seqname:AE003679 seq_release:3 Length = 216994 Score = 904 bits (470), Expect = 0.0 Genome Map Identities = 500/515 (97%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 1 gcctcgacgttcgctaacagagctgagcactgttaagcggcgcttcgtgactgtgagccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33811 gcctcgacgttcgctaacagagctgagcactgttaagcggcgcttcgtgactgtgagccg 33870 Query: 61 aacgcatacgaacgacctacgccagcgcgctcaaacctgttggccaactgagtgtgcaac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33871 aacgcatacgaacgacctacgccagcgcgctcaaacctgttggccaactgagtgtgcaac 33930 Query: 121 aaacatgttgtgtttacgttttttccttggcctaagcggtttgagcgtgttgctgtcctc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33931 aaacatgttgtgtttacgttttttccttggcctaagcggtttgagcgtgttgctgtcctc 33990 Query: 181 catcaacatgttgcacttttcgggcttggcaacaagtgctttttgtttccaactaccaga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33991 catcaacatgttgcacttttcgggcttggcaacaagtgctttttgtttccaactaccaga 34050 Query: 241 tactctttctatttaactgtatttatggttgtagttatattatgccgttaattgtgaaat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34051 tactctttctatttaactgtatttatggttgtagttatattatgccgttaattgtgaaat 34110 Query: 301 gttaccaatgagtattgcatataaaaatcatttaaaatttacatattacaaactcaagct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34111 gttaccaatgagtattgcatataaaaatcatttaaaatttacatattacaaactcaagct 34170 Query: 361 gattttattaaaattaaatgtatatatctaagtcctattcnnnnnnnnnncgtatcaaca 420 |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 34171 gattttattaaaattaaatgtatatatctaagtcctattcaaaaaaaaaacgtatcaaca 34230 Query: 421 gaagctgcgtaatatattgcttaattcaaattggacattcagcccgaat-aaaatatttt 479 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 34231 gaagctgcgtaatatattgcttaattcaaattggacattcagccgaaataaaaatatttt 34290 Query: 480 tgacagat-cactaggaagctctgacacggaaaaa 513 |||||||| ||||||||||||||||||||| |||| Sbjct: 34291 tgacagatacactaggaagctctgacacggcaaaa 34325 \# anon- EST:Gibbs2 = ? maybe new >anon- EST:Gibbs2 gaattccata atttataatc cttgctctgg acccccagca acaataatac caacaacaac aacaacaaca acaacaacaa caacagcagc agcagcaaca agaacaaaca cagcaacagg agcaggagta acaagagcag aaataatatg ggaatgccag tgcaaatatt tttgcttgca cctctcggtt tctatgatcc gagtttcctt ttacttttat gtcctatttt atttattcga aacctgtgcc tctcccaggt tggcagcaca aatattttgt tggttccctt ccgagccacc cagccactat ttcacacccg ctcggctgca tttagtttat gtgtgtgtta ccttttttct cggtaaaatg aggtcaaaag tttattggct aataaatgtg tgcgcaagtg ggtggggtgt tgttttcgca ggcattaatg tcaggcgcaa actgcagagg ctgcaaagtt tttggcagag ctttaatgcc gataaacaaa ttgcatgcac ttagctacag gccgcccatc caaaaggaga tgggcaggat tagggcagtc gaaatgggct ttaaatgatc ctgcagcaca ctcgatggca cgatggccac aaaagcgaat cagctgccct accgacggct aattacaaac taatcagcca acaaataaat ttcaaataaa ttatacaaga acggaattgg ctaatgcatt gcagttgaac gacagccaga gcgaaacaaa aaacttcaaa tctatgttgg gccaaccaaa ccgaacgaaa gcaaaccaaa ccaagccaaa actgccaaac acaccaaaat tttaagctat tcaattatgg ttcgttcaaa aagaacagca aaactatttt aattatttac attaagcccc tcaacatgtt tggccgacac acaagctctt ttctccaatt aaactgggaa taggatctag ctggcaaggg aaaccggcat agaatatctc attcgcattc acattcgact gaacatcaac cgatgtgctg taattcagaa cgggccgaaa gattcgagtt tcctctgatc agcccaaggt gaacttatag gcccccactc cctagaagaa ctaagttgtt cgccgtaaaa gcatttggtt caatgtttaa tgagggtggg ctcaataata gagaaagcct accttttatg cttgcctctt cccccgctgg gaaaacaacc ccttccaacg aataatgatt atgacagctt ctttgccgat gagcgactct gctcctgtca tttcgcactg gtttccactg tacctctgcc agatttgctg gctgcttggg ctttaattaa acggcaattg tggtcatcag ttgtcaggtt ctcttgtgcc taatcagttt gtgtgatgaa agactaagct gggattacgg aatgtctgcc atgcgggtgc gacatttgaa taatgaatgt caactcgatg ttcggcttgc aggggaaaaa tataagcccg acctaagtcc caaatgtcac tcagctgtca attgtaagca aatctaagga gcagagattc gggcggtttc gctagcggag gaggccaact aattggggcg tggccggttt cggccagctg acaaactaac tgaccaacta actgacgtaa ctaggcaagg caattggcct gcccgttagt ccgcccctcc atttgttcat ttgtccatgt cagttagctt ggccttctgt gtgcttgctg cttgaccata aactaatgca cctaattgct gtgattatgt cgtttgtgat tatctaagtg tgcccccgtg tccttgtccc cgtttccgtc ttctggagag ttctgtgcct ctgattttgc cattgcaatg cattgaccgc ctgcatgcgc tgcatacaat taggcacaaa acctaaatct catttatcaa tcacgagtcc tccggcgttc ggcgcgataa tatttgataa ttggccaaag ccattactga tagtcccagc tggatcagaa ttc Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003597 |gb|AE003597| arm:3L 22100943..22406554 estimated- cyto:79D1-79E5 gadfly- seqname:AE003597 seq_release:3 Length = 305612 Score = 3584 bits (1864), Expect = 0.0 Genome Map Identities = 1878/1885 (99%) Strand = Plus / Plus Query: 119 ggagcaggagtaacaagagcagaaataatatgggaatgccagtgcaaatatttttgcttg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147665 ggagcaggagtaacaagagcagaaataatatgggaatgccagtgcaaatatttttgcttg 147724 Query: 179 cacctctcggtttctatgatccgagtttccttttacttttatgtcctattttatttattc 238 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 147725 ctcctctcggtttctatgatccgagtttccttttacttttttgtcctattttatttattc 147784 Query: 239 gaaacctgtgcctctcccaggttggcagcacaaatattttgttggttcccttccgagcca 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147785 gaaacctgtgcctctcccaggttggcagcacaaatattttgttggttcccttccgagcca 147844 Query: 299 cccagccactatttcacacccgctcggctgcatttagtttatgtgtgtgttacctttttt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147845 cccagccactatttcacacccgctcggctgcatttagtttatgtgtgtgttacctttttt 147904 Query: 359 ctcggtaaaatgaggtcaaaagtttattggctaataaatgtgtgcgcaagtgggtggggt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147905 ctcggtaaaatgaggtcaaaagtttattggctaataaatgtgtgcgcaagtgggtggggt 147964 Query: 419 gttgttttcgcaggcattaatgtcaggcgcaaactgcagaggctgcaaagtttttggcag 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147965 gttgttttcgcaggcattaatgtcaggcgcaaactgcagaggctgcaaagtttttggcag 148024 Query: 479 agctttaatgccgataaacaaattgcatgcacttagctacaggccgcccatccaaaagga 538 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 148025 agctttaatgccgataaacaaattgcatgcacttagctacaggccgcccatccaagggga 148084 Query: 539 gatgggcaggattagggcagtcgaaatgggctttaaatgatcctgcagcacactcgatgg 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148085 gatgggcaagattagggcagtcgaaatgggctttaaatgatcctgcagcacactcgatgg 148144 Query: 599 cacgatggccacaaaagcgaatcagctgccctaccgacggctaattacaaactaatcagc 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148145 cacgatggccacaaaagcgaatcagctgccctaccgacggctaattacaaactaatcagc 148204 Query: 659 caacaaataaatttcaaataaattatacaagaacggaattggctaatgcattgcagttga 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148205 caacaaataaatttcaaataaattatacaagaacggaattggctaatgcattgcagttga 148264 Query: 719 acgacagccagagcgaaacaaaaaacttcaaatctatgttgggccaaccaaaccgaacga 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148265 acgacagccagagcgaaacaaaaaacttcaaatctatgttgggccaaccaaaccgaacga 148324 Query: 779 aagcaaaccaaaccaagccaaaactgccaaacacaccaaaattttaagctattcaattat 838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148325 aagcaaaccaaaccaagccaaaactgccaaacacaccaaaattttaagctattcaattat 148384 Query: 839 ggttcgttcaaaaagaacagcaaaactattttaattatttacattaagcccctcaacatg 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148385 ggttcgttcaaaaagaacagcaaaactattttaattatttacattaagcccctcaacatg 148444 Query: 899 tttggccgacacacaagctcttttctccaattaaactgggaataggatctagctggcaag 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148445 tttggccgacacacaagctcttttctccaattaaactgggaataggatctagctggcaag 148504 Query: 959 ggaaaccggcatagaatatctcattcgcattcacattcgactgaacatcaaccgatgtgc 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148505 ggaaaccggcatagaatatctcattcgcattcacattcgactgaacatcaaccgatgtgc 148564 Query: 1019 tgtaattcagaacgggccgaaagattcgagtttcctctgatcagcccaaggtgaacttat 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148565 tgtaattcagaacgggccgaaagattcgagtttcctctgatcagcccaaggtgaacttat 148624 Query: 1079 aggcccccactccctagaagaactaagttgttcgccgtaaaagcatttggttcaatgttt 1138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148625 aggcccccactccctagaagaactaagttgttcgccgtaaaagcatttggttcaatgttt 148684 Query: 1139 aatgagggtgggctcaataatagagaaagcctaccttttatgcttgcctcttcccccgct 1198 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 148685 aatgagggtgggctcaataatacagaaagcctaccttttatgcttgcctcttcccccgct 148744 Query: 1199 gggaaaacaaccccttccaacgaataatgattatgacagcttctttgccgatgagcgact 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148745 gggaaaacaaccccttccaacgaataatgattatgacagcttctttgccgatgagcgact 148804 Query: 1259 ctgctcctgtcatttcgcactggtttccactgtacctctgccagatttgctggctgcttg 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148805 ctgctcctgtcatttcgcactggtttccactgtacctctgccagatttgctggctgcttg 148864 Query: 1319 ggctttaattaaacggcaattgtggtcatcagttgtcaggttctcttgtgcctaatcagt 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148865 ggctttaattaaacggcaattgtggtcatcagttgtcaggttctcttgtgcctaatcagt 148924 Query: 1379 ttgtgtgatgaaagactaagctgggattacggaatgtctgccatgcgggtgcgacatttg 1438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148925 ttgtgtgatgaaagactaagctgggattacggaatgtctgccatgcgggtgcgacatttg 148984 Query: 1439 aataatgaatgtcaactcgatgttcggcttgcaggggaaaaatataagcccgacctaagt 1498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148985 aataatgaatgtcaactcgatgttcggcttgcaggggaaaaatataagcccgacctaagt 149044 Query: 1499 cccaaatgtcactcagctgtcaattgtaagcaaatctaaggagcagagattcgggcggtt 1558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149045 cccaaatgtcactcagctgtcaattgtaagcaaatctaaggagcagagattcgggcggtt 149104 Query: 1559 tcgctagcggaggaggccaactaattggggcgtggccggtttcggccagctgacaaacta 1618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149105 tcgctagcggaggaggccaactaattggggcgtggccggtttcggccagctgacaaacta 149164 Query: 1619 actgaccaactaactgacgtaactaggcaaggcaattggcctgcccgttagtccgcccct 1678 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149165 actgaccaactaactgacgtaactaggcaaggcaattggcctgcccgttagtccgcccct 149224 Query: 1679 ccatttgttcatttgtccatgtcagttagcttggccttctgtgtgcttgctgcttgacca 1738 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149225 ccatttgttcatttgtccatgtcagttagcttggccttctgtgtgcttgctgcttgacca 149284 Query: 1739 taaactaatgcacctaattgctgtgattatgtcgtttgtgattatctaagtgtgcccccg 1798 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149285 taaactaatgcacctaattgctgtgattatgtcgtttgtgattatctaagtgtgcccccg 149344 Query: 1799 tgtccttgtccccgtttccgtcttctggagagttctgtgcctctgattttgccattgcaa 1858 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149345 tgtccttgtccccgtttccgtcttctggagagttctgtgcctctgattttgccattgcaa 149404 Query: 1859 tgcattgaccgcctgcatgcgctgcatacaattaggcacaaaacctaaatctcatttatc 1918 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149405 tgcattgaccgcctgcatgcgctgcatacaattaggcacaaaacctaaatctcatttatc 149464 Query: 1919 aatcacgagtcctccggcgttcggcgcgataatatttgataattggccaaagccattact 1978 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149465 aatcacgagtcctccgccgttcggcgcgataatatttgataattggccaaagccattact 149524 Query: 1979 gatagtcccagctggatcagaattc 2003 ||||||||||||||||||||||||| Sbjct: 149525 gatagtcccagctggatcagaattc 149549 \# anon- EST:GressD1 == ? maybe new or junk >anon- EST:GressD1 ttttctccaa atttcaaggg tctcaaatcg gattttttaa acaaaacctc gaaaaaatac tcaaaaactg aattgaccgg tgattaaaat ggaccgcctt tacaagacga gtggagtcgc ggacgatcta atggaccgat gtcgattaac gcgacaccca gcggcgaggg cagatcgcac ggcg Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003816 |gb|AE003816| arm:2R 8923493..9210836 estimated- cyto:50C6-50E1 gadfly- seqname:AE003816 seq_release:3 Length = 287344 Score = 123 bits (64), Expect = 1e-27 Genome Map Identities = 89/94 (94%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 1 ttttctccaaatttcaagggtctcaaatcggattttttaaacaaaacctcgaaaaaatac 60 |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 3234 ttttctccaaatttcaggtgtctcaaatcg-attttttaaacaaaacctcgaaaaa-tac 3291 Query: 61 tcaaaaactgaattgaccggtgattaaaatggac 94 ||||||||||||||||||||||| |||||||||| Sbjct: 3292 tcaaaaactgaattgaccggtga-taaaatggac 3324 >gadfly| SEG:AE003441 |gb|AE003441| arm:X 7253939..7539888 estimated- cyto:7B3-7B8 gadfly- seqname:AE003441 seq_release:3 Length = 285950 Score = 37.2 bits (19), Expect = 0.13 Genome Map Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 caaatcggattttttaaac 42 ||||||||||||||||||| Sbjct: 80234 caaatcggattttttaaac 80216 Score = 31.5 bits (16), Expect = 7.2 Genome Map Identities = 18/19 (94%) Strand = Plus / Plus Query: 28 tcggattttttaaacaaaa 46 ||||| ||||||||||||| Sbjct: 79134 tcggactttttaaacaaaa 79152 \# anon- EST:GressD10 = CG9253, I think (must be ?:) >anon- EST:GressD10 tacaaacgag tgacgaaggg aggatctagg tagcggagcc aggaaatgaa gataacaatc ataaggaagg ggacagcagc actaagtgtg aagatgataa atccgaggat gaccgaggaa cagaagctaa cctggaagat ctggtctcaa tgaggcttgt gtcagcatgt gacgaattga agtgga Query= anon- EST:GressD10 >CG9253-RA type=mRNA; loc= 2L:join (21112976..21113247,21113308..21113566, 21113756..21114895); ID=CG9253-RA; name=CG9253-RA; db_xref='CG9253,FlyBase:FBgn0032919'; len=1671 Length = 1671 Genome Map Score = 135 bits (70), Expect = 1e-31 Identities = 180/210 (85%), Gaps = 24/210 (11%) Strand = Plus / Plus Query: 1 tacaaacgagtgacgaag-ggaggatctaggtagcg-----gagccaggaaatgaagata 54 |||||||||||||||||| ||||||||||||||||| |||| | | ||||||||| Sbjct: 109 tacaaacgagtgacgaagaggaggatctaggtagcgaggaggagcaggaagatgaagata 168 Query: 55 acaatcataaggaaggggacagca-----gcactaagtg-tgaagatgataaa---tccg 105 ||||||||||||||||||||||| |||||||||| ||||||||||||| |||| Sbjct: 169 acaatcataaggaaggggacagcgaggcggcactaagtggtgaagatgataaaggctccg 228 Query: 106 aggatgac-----cgaggaacagaagctaacctgg-aagatct-ggtctcaatgaggc-t 157 |||| ||| |||||||||||||||||||||| ||||||| |||||||||||||| | Sbjct: 229 aggacgacgcagccgaggaacagaagctaacctggaaagatctcggtctcaatgaggctt 288 Query: 158 tgtgtc-agcatgtgacgaattgaagtgga 186 |||||| ||||||||||||||||||||||| Sbjct: 289 tgtgtcaagcatgtgacgaattgaagtgga 318 \# anon- EST:GressD11 = ?, only self match \*z FBgn0025330 \*g X65274 >anon- EST:GressD11 gaaataccca gtagataaaa ataaaacaga agtaaaaggc tgcataaaaa ataaattcca attgaagctc tagcaagttc acttcgtttt cgatacgagt gacaaaaaga gaccacatat Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 2,262,611 sequences; 10,883,439,008 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs \# anon- EST:GressD16 = CG6483 >anon- EST:GressD16 ccctggctct ggccagcctc cgccggtctg ctgccccagc gagtgccgat ccacccccgt gacctgcccg ccgtgaccaa gatcgagggt cgcatcacca atggcaagac cgccacttct ggccagttcc ctaccaggtg ggactcagct tcgccagcac c Database: dmel_all_transcript_r320 >CG6483-RA type=mRNA; loc= 3L:join (6010082..6010344,6010404..6011008); Genome Map ID=CG6483-RA; name=CG6483-RA; db_xref='CG6483,FlyBase:FBgn0035665'; len=868 Length = 868 Score = 256 bits (133), Expect = 4e-68 Identities = 157/164 (95%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 1 ccctggctctggcca--gcctccgccggtctgctgccccagcgagtgccgatccaccccc 58 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 26 ccctggctctggccaccgcctccgccggtctgctgccccagcaggtgccgatccaccccc 85 Query: 59 gtgacctgcccgccgtgaccaagatcgagggtcgcatcaccaatggcaagaccgccactt 118 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 86 gtgacctgcccgccgtgaccaatatcgagggtcgcatcaccaacggcaagaccgccactt 145 Query: 119 ctggccagtt-ccctaccaggtgggactcagcttcgccagcacc 161 |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146 ctggccagttcccctaccaggtgggactcagcttcgccagcacc 189 \# anon- EST:GressD4 = CG4863 >anon- EST:GressD4 agcgatcaat aaacagattt tgggctaagc tgactcgaag atgcatctaa tggaaaagac cacgtacaga tttacatcga tatgtgatag agtgatcata tagtatctca t Database: dmel_all_transcript_r320 >CG4863-RB type=mRNA; loc= 3R:join (7047909..7048107,7048301..7048469, 7049135..7049270,7049598..7049987,7050231..7050915); ID=RpL3-RB; name=RpL3-RB; db_xref='CG4863,FlyBase:FBgn0020910'; len=1579 Length = 1579 Genome Map Score = 54.5 bits (28), Expect = 2e-07 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 1 agcgatcaataaacagattttgggctaagctgactc 36 ||||||||||||||||||||| |||||||||||||| Sbjct: 1318 agcgatcaataaacagatttt-ggctaagctgactc 1352 Score = 35.3 bits (18), Expect = 0.093 Identities = 32/34 (94%), Gaps = 2/34 (5%) Strand = Plus / Plus Query: 42 tgcatctaatgg-aaaagaccacgt-acagattt 73 |||||||||||| |||||||||||| |||||||| Sbjct: 1368 tgcatctaatgggaaaagaccacgtcacagattt 1401 >CG4863-RE type=mRNA; loc= 3R:join (7047659..7048107,7048301..7048469, 7049135..7049270,7049598..7049987,7050231..7050915); ID=RpL3-RE; name=RpL3-RE; db_xref='CG4863,FlyBase:FBgn0020910'; len=1829 Length = 1829 Genome Map Score = 54.5 bits (28), Expect = 2e-07 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 1 agcgatcaataaacagattttgggctaagctgactc 36 ||||||||||||||||||||| |||||||||||||| Sbjct: 1568 agcgatcaataaacagatttt-ggctaagctgactc 1602 Score = 35.3 bits (18), Expect = 0.093 Identities = 32/34 (94%), Gaps = 2/34 (5%) Strand = Plus / Plus Query: 42 tgcatctaatgg-aaaagaccacgt-acagattt 73 |||||||||||| |||||||||||| |||||||| Sbjct: 1618 tgcatctaatgggaaaagaccacgtcacagattt 1651 \# anon- EST:GressD5 = CG2934 >anon- EST:GressD5 ccacacaatt cgcgcaactt tcggtcgagc gagagcagtc ccatagaaag gaatccagcg caattcgcca cctcttcaac ttcagtcagc tcctctgcgt gtgtgtgtgt gcgtgtgtca tcaagatggc ttcagtcagc tcctctgcgt gtgtgtgtgt gcgtgtgtca tcaagatg Database: dmel_all_transcript_r320 >CG2934-RA type=mRNA; loc= X:join (3621356..3621731,3622070..3622578, 3622669..3623587); ID=VhaAC39-RA; name=VhaAC39-RA; db_xref='CG2934,FlyBase:FBgn0028665'; len=1804 Length = 1804 Genome Map Score = 175 bits (91), Expect = 9e-44 Identities = 98/99 (98%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 1 ccacacaattcgcgcaactttcggtcgagcgagagcagtcccatagaaaggaatccagcg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccacacaattcgcgcaactttcggtcgagcgagagcagtcccatagaaaggaatccagcg 183 Query: 61 caattcgccacctcttcaactt-cagtcagctcctctgc 98 |||||||||||||||||||||| |||||||||||||||| Sbjct: 184 caattcgccacctcttcaacttccagtcagctcctctgc 222 Score = 31.5 bits (16), Expect = 2.3 Identities = 16/16 (100%) Strand = Plus / Plus Query: 133 cagtcagctcctctgc 148 |||||||||||||||| Sbjct: 207 cagtcagctcctctgc 222 \# anon- EST:GressD7 = CG6667 >anon- EST:GressD7 aaaagaaggc tgcataaaaa cggcataaat tcaattgaac gtctaaagca agtcacttgc tttttt Database: dmel_all_transcript_r320 >CG6667-RC type=mRNA; loc= 2L:complement (17416681..17419962,17420023..17420417, 17420487..17420665,17420735..17421088, 17427379..17427451,17427959..17428442); ID=dl-RC; name=dl-RC; db_xref='CG6667,FlyBase:FBgn0000462'; len=4767 Length = 4767 Genome Map Score = 43.0 bits (22), Expect = 2e-04 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 9 gctgcataaaaacggcataaattcaattga 38 |||||||||||||| ||||||||||||||| Sbjct: 187 gctgcataaaaacg-cataaattcaattga 215 >CG6667-RB type=mRNA; loc= 2L:complement (17414916..17415406,17415502..17416100, 17416233..17416295,17417273..17417380, 17419884..17419962,17420023..17420417, 17420487..17420665,17420735..17421088, 17427379..17427451,17427959..17428442); ID=dl-RB; name=dl-RB; db_xref='CG6667,FlyBase:FBgn0000462'; len=2825 Length = 2825 Genome Map Score = 43.0 bits (22), Expect = 2e-04 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 9 gctgcataaaaacggcataaattcaattga 38 |||||||||||||| ||||||||||||||| Sbjct: 187 gctgcataaaaacg-cataaattcaattga 215 \# anon- EST:Nelson1 = CG4065 >anon- EST:Nelson1 ggcangaggc gaaccagaga angggtctga cnctcccaat cccatgggtt tctctccgcg catccacgac cgcagccnac cgcccgcgtt tccgcgtacc attaagatca gggatcgtcc atccngttat cnatttctag aggaaatgat ttcgngcttc aaatacncct gcaaagtcnc cnnntacaag gattactant cggcgctgaa cttctttatc gantacagca aaaagtnggg ccactgcatc ctgtccagaa gcgtgctgca aaccctgttc agcgcccaca tgngttatgg cgcacngtaa agcttcccat naaagcantt ccngcgccat cggttcaggt cttcaactcn ccacccgtat tgaatgccaa ncacccngtg gctgcccatc ccaacgtgc Database: dmel_all_transcript_r320 >CG4065-RA type=mRNA; loc= 2R:complement (19178741..19178935,19178998..19180035, 19180094..19180275,19180336..19180903,19180967..19181339, 19181429..19181606); ID=CG4065-RA; name=CG4065-RA; db_xref='CG4065,FlyBase:FBgn0034982'; len=2534 Length = 2534 Genome Map Score = 581 bits (302), Expect = e-165 Identities = 366/399 (91%), Gaps = 4/399 (1%) Strand = Plus / Plus Query: 12 aaccagagaangggtctgacnctcccaatcccatgggtttctctccgcgcatccacgacc 71 |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1105 aaccagagaaggggtctgacgctcccaatcccatgggtttctctccgcgcatccacgacc 1164 Query: 72 gcagccnaccgcccgcgtttccgcgtaccattaagatcagggatcgtccatccngttatc 131 |||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 1165 gcagccaaccgcccgcgtttccgcgtagcattaagatcagggatcgtccatccagttatc 1224 Query: 132 natttctagaggaaatgatttcgngcttcaaatacncctgcaaagtcnccnnntacaagg 191 ||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||| Sbjct: 1225 agtttctagaggaaatgatttcgcgcttcaaatacgcctgcaaagtcaccaagtacaagg 1284 Query: 192 attactantcggcgctgaacttctttatcgantacagcaaaaagtngggccactgcatcc 251 ||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||| Sbjct: 1285 attactattcggcgctgaacttctttatcgagtacagcaaaaagtcgggccagtgcatcc 1344 Query: 252 tgtccagaagcgtgctgcaaaccctgttcagcgcccacatgngttatggcgcacngtaaa 311 ||||||||||||||||||||||||||||||||||| ||||| | |||||||||| | ||| Sbjct: 1345 tgtccagaagcgtgctgcaaaccctgttcagcgccaacatgcg-tatggcgcacgg-aaa 1402 Query: 312 gcttcccatnaaagcanttccngcgcca-tcggttcaggtcttcaactcnccacccgtat 370 ||||||||| ||||| |||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 1403 gcttcccatg-aagcagttcctgcgccactcggttcaggtcttcaactcgccacccgtat 1461 Query: 371 tgaatgccaancacccngtggctgcccatcccaacgtgc 409 |||||||||| || || ||||||||| ||||||| |||| Sbjct: 1462 tgaatgccaagcatccggtggctgccgatcccaaggtgc 1500 \# anon- EST:ParkEST125 = CG4182 >anon- EST:ParkEST125 gaattctgac caactgaccg gaggtccaca aaaaaaatag cgagcaatcc aaaaaaatcg aacaattaaa acccatagct ccaaaatgaa cccactagga atgttgagcc tgggcttaat ggtgtgcctt atcggcgcct tcagccggat tgcatcggcc aagctggagg agaagttctc gtggaagcaa ctggccttcg attggcccac tccggaggcc gaggcggagg ccaagtcgaa tggccactac atcgtggaga acaacctgcc gctggtcgtg gagcgttggc aaaacagaat ctttgtcact gtgccaagat ggaaggctgg tgttgctgcc acactcaact acatcgacat caattcgacg gagaagtcgc caaagctgca tccgtatccc agttgggagg ccaacaagtt gccgcgcggc cgc Database: dmel_all_transcript_r320 >CG4182-c-RA type=mRNA; loc= 2L:join (15013556..15013881,15014671..15015076, 15015136..15015927); ID=yellow-c-RA; name=yellow-c-RA; db_xref='CG4182,FlyBase:FBgn0041713'; len=1524 Length = 1524 Genome Map Score = 644 bits (335), Expect = 0.0 Identities = 341/344 (99%) Strand = Plus / Plus Query: 80 tccaaaatgaacccactaggaatgttgagcctgggcttaatggtgtgccttatcggcgcc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 tccaaaatgaacccactaggaatgttgagcctgggcttaatggtgtgccttatcggcgcc 147 Query: 140 ttcagccggattgcatcggccaagctggaggagaagttctcgtggaagcaactggccttc 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 ttcagccggattgcatcggccaagctggaggagaagttctcgtggaagcaactggccttc 207 Query: 200 gattggcccactccggaggccgaggcggaggccaagtcgaatggccactacatcgtggag 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gattggcccactccggaggccgaggcggaggccaagtcgaatggccactacatcgtggag 267 Query: 260 aacaacctgccgctggtcgtggagcgttggcaaaacagaatctttgtcactgtgccaaga 319 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 aacaacctgccgctgggcgtggagcgttggcaaaacagaatctttgtcactgtgccaaga 327 Query: 320 tggaaggctggtgttgctgccacactcaactacatcgacatcaattcgacggagaagtcg 379 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 328 tggaaggctggtgttgctgccacactcaactacatcgacattaattcgacggagaagtcg 387 Query: 380 ccaaagctgcatccgtatcccagttgggaggccaacaagttgcc 423 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 388 ccaaagctgcatccgtatcccagttgggaggccaacaagctgcc 431 \# anon- EST:ParkEST132 = CG10992 >anon- EST:ParkEST132 gaattctgac taactgacaa cgtcagtcgc gaatcggaat gaaaataaaa ggaggggagt acgaaaacaa gaacggagca gagagcccgc ttaatatgac gcgtcatttt ccaccatttt actgctgtga tttgtttgaa ttttgctgtg tcagcgcact ggaaattcgt tggacaagaa taatgaaact actgctcctg gtggccaccg cggcctccgt ggcggcactc acgtccggtg agccgtcact gctctcggat gagttcatcg aggtggtgcg cagtaaggcc aaaacctgga cggtgggtcg caatttcgat gcatccgtaa cggagccgcg cggccgc Database: dmel_all_transcript_r320 >CG10992-RA type=mRNA; loc= X:complement (13510677..13511309,13511818..13511985, 13512132..13512392,13512469..13512840); ID=CG10992-RA; name=CG10992-RA; db_xref='CG10992,FlyBase:FBgn0030521'; len=1434 Length = 1434 Genome Map Score = 514 bits (267), Expect = e-145 Identities = 277/282 (98%) Strand = Plus / Plus Query: 54 ggggagtacgaaaacaagaacggagcagagagcccgcttaatatgacgcgtcattttcca 113 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 gggcagtacgaaaacaagaacggagcagagagcccgcttaatacgacgcgtcattttcca 183 Query: 114 ccattttactgctgtgatttgtttgaattttgctgtgtcagcgcactggaaattcgttgg 173 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 184 ccattttactgctgtgatttgtttgaattttgctgtgtcagcgcattggaaattcgttgg 243 Query: 174 acaagaataatgaaactactgctcctggtggccaccgcggcctccgtggcggcactcacg 233 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 acaagaataatgaatctattgctcctggtggccaccgcggcctccgtggcggcactcacg 303 Query: 234 tccggtgagccgtcactgctctcggatgagttcatcgaggtggtgcgcagtaaggccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 tccggtgagccgtcactgctctcggatgagttcatcgaggtggtgcgcagtaaggccaaa 363 Query: 294 acctggacggtgggtcgcaatttcgatgcatccgtaacggag 335 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 acctggacggtgggtcgcaatttcgatgcatccgtaacggag 405 Score = 68.0 bits (35), Expect = 5e-11 Identities = 37/38 (97%) Strand = Plus / Minus Query: 19 aacgtcagtcgcgaatcggaatgaaaataaaaggaggg 56 ||||||||| |||||||||||||||||||||||||||| Sbjct: 1371 aacgtcagttgcgaatcggaatgaaaataaaaggaggg 1334 \# anon- EST:ParkEST325 = CG6199 >anon- EST:ParkEST325 gaattctgac taactgacgg ggggggggtc gcagagaagg ctgttcatcc ggccgataac gcaccatgaa gttcatcagc gcgcgtggag gattgtggaa gtaacccgta aaggcgcgct cttgcgggtg ggactcccga tattttgtgg agcggaaggt gttttgattt ccttagcatt tagcacaaaa aaatgcaact agtataaagt actgttcact ataacaattt ttaaccaccg atagcgagtg cttcactgtg tgtgcgagta agagagagag agagcaacta gctccagcat catgagaata caacaaagcg ccttgttgtt gttgctgctg gccgtgacgt cgcaaggaga tgccgagtcc ccgcgcggcc gc Database: dmel_all_transcript_r320 >CG6199-RA type=mRNA; loc= 3L:complement (11155698..11156242,11156302..11156736, 11156798..11156924,11159747..11159872, 11159932..11160033,11160154..11160407, 11160475..11161006,11161065..11161204, 11162437..11162522,11163266..11163578); ID=CG6199-RA; name=CG6199-RA; db_xref='CG6199,FlyBase:FBgn0036147'; len=2660 Length = 2660 Genome Map Score = 402 bits (209), Expect = e-111 Identities = 230/251 (91%) Strand = Plus / Plus Query: 120 tcttgcgggtgggactcccgatattttgtggagcggaaggtgttttgatttccttagcat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 tcttgcgggtgggactcccgatattttgtggagcggaaggtgttttgatttccttagcat 112 Query: 180 ttagcacnnnnnnntgcaactagtataaagtactgttcactataacaatttttaaccacc 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 ttagcacaaaaaaatgcaactagtataaagtactgttcactataacaatttttaaccacc 172 Query: 240 gatagcgagtgcttcactgtgtgtgcgagtannnnnnnnnnnnnncaactagctccagca 299 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 173 gatagcgagtgcttcactgtgtgtgcgagtaagagagagagagagcaactagctccagca 232 Query: 300 tcatgagaatacaacaaagcgccttgttgttgttgctgctggccgtgacgtcgcaaggag 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tcatgagaatacaacaaagcgccttgttgttgttgctgctggccgtgacgtcgcaaggag 292 Query: 360 atgccgagtcc 370 ||||||||||| Sbjct: 293 atgccgagtcc 303 Score = 181 bits (94), Expect = 4e-45 Identities = 96/97 (98%) Strand = Plus / Minus Query: 29 tcgcagagaaggctgttcatccggccgataacgcaccatgaagttcatcagcgcgcgtgg 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2178 tcgcagagaaggctgttcatccggccgataacgcaccatgaagttcatcagcgcgcgtgg 2119 Query: 89 aggattgtggaagtaacccgtaaaggcgcgctcttgc 125 ||||||||||||||||||||||||||||||||| ||| Sbjct: 2118 aggattgtggaagtaacccgtaaaggcgcgctcctgc 2082 \# \------ Subject: Death to anon-ESTs 3 Here is the last bunch of anon-ESTs, algorithm as before. enjoy M anon- EST:Posey1 = new ? anon- EST:Posey101 = CG32172 anon- EST:Posey102 = CG3056 anon- EST:Posey107 = new ? anon- EST:Posey11 = CG8086? anon- EST:Posey117 = CG3257 anon- EST:Posey119 = ? end of MTA-like ? anon- EST:Posey126 = ? end of Df31 ? anon- EST:Posey139 = end of BEST:GH08269 ? anon- EST:Posey146 = new? anon- EST:Posey152 = ? anon- EST:Posey155 = ? anon- EST:Posey156 = EST GM16138 anon- EST:Posey171 = CG12187 anon- EST:Posey175 = end of CG13203 ? anon- EST:Posey178 = ? end CG31369 ? anon- EST:Posey186 = CG6549 anon- EST:Posey204 = CG10071 anon- EST:Posey215 = CG2985? anon- EST:Posey216 = end of CG32423 anon- EST:Posey221 = CG3620 anon- EST:Posey226 = end of CG32712 ? anon- EST:Posey232 = CG18815 anon- EST:Posey243 = CG32172 anon- EST:Posey246 = CG5627 anon- EST:Posey247 = CG5119 anon- EST:Posey249 = CG5119 anon- EST:Posey25 = CG30185 anon- EST:Posey251 = ? anon- EST:Posey259 =CG8177 anon- EST:Posey262 = CG15209 anon- EST:Posey263 = ? end of l(3)82Fd ? anon- EST:Posey264 = not in genome, and a pretty odd seq anon- EST:Posey268 = ? anon- EST:Posey277 = CG31451 anon- EST:Posey280 = ? anon- EST:Posey285 = CG6869 anon- EST:Posey288 = CG13993 anon- EST:Posey289 = end of lace ? anon- EST:Posey292 = CG32172 anon- EST:Posey294 = CG2848 anon- EST:Posey35 = CG32172 anon- EST:Posey37 = CG9282 anon- EST:Posey5 = CG1263 anon- EST:Posey52 = CG31158? anon- EST:Posey55 = CG11739 anon- EST:Posey59 = CG8472 anon- EST:Posey6 = CG6253 anon- EST:Posey64 = CG11593 anon- EST:Posey65 = CG16982 anon- EST:Posey67 = CG8309 anon- EST:Posey69 = CG31543 anon- EST:Posey7 = end of CHES-1-like ? anon- EST:Posey79 = CG5889 anon- EST:Posey83 = ? anon- EST:Posey9 = CG9325 anon- EST:Posey93 = end of dlg1 ? anon- EST:PoseyA1 = qbert anon- EST:CL1d7 = CG10391 anon- EST:CLB3 = CG6736 \# anon- EST:Posey1 = new ? >anon- EST:Posey1 ggcacgagcc aaagttcact tgtctcagat tttaacttaa tttggagctt tatacagtat acagaagatt ttatttcacc acctatcata attcaaatta aaattgtttt tgaaatagta aagcggtaaa ttaaaaacta tatgtctatg aaaatctgtc tataaaaata tgtataattt gattaaatta atttttcatt tgtaagaatt actataatta tttaaaattt aaaaactctt gtacggcttt ttgactcaaa atctttgctt acaaaaaaga tttgtccccg cataagtcaa cacggtgttg acatggtgtt ctcatggtac tcaaaaataa ttaagtatgt atcaaagtat tagtgcgaaa aaatgtgaaa tagaaagtta acattttagc atataggaat acaactatta aaatgaattt aaatgtttga atttgttaca aaataaagtt aatttataaa cagcaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE002665 |gb|AE002665| arm:3L 23206183..23352213 estimated- cyto:80E3-80F6 gadfly- seqname:AE002665 seq_release:3 Length = 146031 Score = 896 bits (466), Expect = 0.0 Genome Map Identities = 468/469 (99%) Strand = Plus / Minus Query: 9 ccaaagttcacttgtctcagattttaacttaatttggagctttatacagtatacagaaga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24285 ccaaagttcacttgtctcagattttaacttaatttggagctttatacagtatacagaaga 24226 Query: 69 ttttatttcaccacctatcataattcaaattaaaattgtttttgaaatagtaaagcggta 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24225 ttttatttcaccacctatcataattcaaattaaaattgtttttgaaatagtaaagcggta 24166 Query: 129 aattaaaaactatatgtctatgaaaatctgtctataaaaatatgtataatttgattaaat 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24165 aattaaaaactatatgtctatgaaaatctgtctataaaaatatgtataatttgattaaat 24106 Query: 189 taatttttcatttgtaagaattactataattatttaaaatttaaaaactcttgtacggct 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24105 taatttttcatttgtaagaattactataattatttaaaatttaaaaactcttgtacggct 24046 Query: 249 ttttgactcaaaatctttgcttacaaaaaagatttgtccccgcataagtcaacacggtgt 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24045 ttttgactcaaaatctttgcttacaaaaaagatttgtccccgcataagtcaacacggtgt 23986 Query: 309 tgacatggtgttctcatggtactcaaaaataattaagtatgtatcaaagtattagtgcga 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23985 tgacatggtgttctcatggtactcaaaaataattaagtatgtatcaaagtattagtgcga 23926 Query: 369 aaaaatgtgaaatagaaagttaacattttagcatataggaatacaactattaaaatgaat 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23925 aaaaatgtgaaatagaaagttaacattttagcatataggaatacaactattaaaatgaat 23866 Query: 429 ttaaatgtttgaatttgttacaaaataaagttaatttataaacagcaaa 477 |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23865 ttaaatgtatgaatttgttacaaaataaagttaatttataaacagcaaa 23817 >gadfly| SEG:AE003507 |gb|AE003507| arm:X 17583607..17883410 estimated- cyto:16E1-16F7 gadfly- seqname:AE003507 seq_release:3 Length = 299804 Score = 43.0 bits (22), Expect = 0.007 Genome Map Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 atgtataatttgattaaattaattt 194 ||||||||||| ||||||||||||| Sbjct: 87125 atgtataatttaattaaattaattt 87149 \# anon- EST:Posey101 = CG32172 >anon- EST:Posey101 ggcacgagcc gcagcaacga cggttgggca catcccgtct catccccact ctctcgaatt gtgtccgttg gtagccgaag ttacgattgc aaaactttcg tcatctctct ctcactctct gaagcaaaag ccaaggccgg agcaggtgca tatggtgcca acccccctgg cccccccaaa aggggggtgg tgctggtgca attgcaaagg cacaggagca caggagcagc taaataaaca agaaagcaaa atcaacaacc gcaaaagtct aagacatgta tcacgaattg aaaatgataa tgacaaaaaa aaa Database: dmel_all_transcript_r320 >CG32172-RA type=mRNA; loc= 3L:complement (17348426..17350337); Genome Map ID=noe-RA; name=noe-RA; db_xref='CG32172,FlyBase:FBgn0026197'; len=1912 Length = 1912 Score = 442 bits (230), Expect = e-124 Identities = 263/296 (88%) Strand = Plus / Plus Query: 9 ccgcagcaacgacggttgggcacatcccgtctcatccccactctctcgaattgtgtccgt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 ccgcagcaacgacggttgggcacatcccgtctcatccccactctctcgaattgtgtccgt 185 Query: 69 tggtagccgaagttacgattgcaaaactttcgtcannnnnnnnnnnnnnnnngaagcaaa 128 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 186 tggtagccgaagttacgattgcaaaactttcgtcatctctctctcactctctgaagcaaa 245 Query: 129 agccaaggccggagcaggtgcatatggtgccaannnnnnnnnnnnnnnnaaaaggggggt 188 ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 246 agccaaggccggagcaggtgcatatggtgccaacccccctggcccccccaaaaggggggt 305 Query: 189 ggtgctggtgcaattgcaaaggcacaggagcacaggagcagctaaataaacaagaaagca 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ggtgctggtgcaattgcaaaggcacaggagcacaggagcagctaaataaacaagaaagca 365 Query: 249 aaatcaacaaccgcaaaagtctaagacatgtatcacgaattgaaaatgataatgac 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aaatcaacaaccgcaaaagtctaagacatgtatcacgaattgaaaatgataatgac 421 \# anon- EST:Posey102 = CG3056 >anon- EST:Posey102 ggcacgagat aaacttgaaa ttttccaacc agcatacccg tgagacccag aggtccgaaa tttttttttt tagtattgat aatctctaaa cgtaaatcct agtctcgtag caatatcata gttaaggtga cttttttttc agaataaact taaagcacga aagaaataca tgtatttaaa ccttaaatcc taaagtttat aataaacgaa cacaaattga attcttgagt ctgcgagcga gatggtgcga tgcagcctca gcgaaagaga gcgagagaga tgatacagat ttgaggtaca gtcagcacag tacagtgcgg atcagagctt aagttgacga tatactattg ttgtaaattg atgttaggct aagcaaataa atagttaaaa tgttcaaaaa Database: dmel_all_transcript_r320 >CG3056-RA type=mRNA; loc= X:join (1128003..1128100,1128668..1128807, 1128888..1129211,1129352..1129459,1129523..1129704, 1129898..1130484,1130595..1132177); ID=CG3056-RA; name=CG3056-RA; db_xref='CG3056,FlyBase:FBgn0024987'; len=3022 Length = 3022 Genome Map Score = 319 bits (166), Expect = 8e-87 Identities = 192/212 (90%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 9 ataaacttgaaattttccaaccagcatacccgtgagacccagaggtccgaaannnnnnnn 68 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2811 ataaacttgaaattttccaaccagcatacccgtgagacccagaggtccgaaatttttttt 2870 Query: 69 nnn-agtattgataatctctaaacgtaaatcctagtctcgtagcaatatcatagttaagg 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2871 ttttagtattgataatctctaaacgtaaatcctagtctcgtagcaatatcatagttaagg 2930 Query: 128 tgacnnnnnnnncagaataaacttaaagcacgaaagaaatacatgtatttaaaccttaaa 187 |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2931 tgacttttttttcagaataaacttaaagcacgaaagaaatacatgtatttaaaccttaaa 2990 Query: 188 tcctaaagtttataataaacgaacacaaattg 219 |||||||||||||||||||||||||||||||| Sbjct: 2991 tcctaaagtttataataaacgaacacaaattg 3022 >CG3056-RB type=mRNA; loc= X:join (1128003..1128100,1128668..1128807, 1128888..1129211,1129352..1129459,1129523..1129704, 1129898..1132120); ID=CG3056-RB; name=CG3056-RB; db_xref='CG3056,FlyBase:FBgn0024987'; len=3075 Length = 3075 Genome Map Score = 210 bits (109), Expect = 8e-54 Identities = 135/155 (87%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 9 ataaacttgaaattttccaaccagcatacccgtgagacccagaggtccgaaannnnnnnn 68 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2921 ataaacttgaaattttccaaccagcatacccgtgagacccagaggtccgaaatttttttt 2980 Query: 69 nnn-agtattgataatctctaaacgtaaatcctagtctcgtagcaatatcatagttaagg 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2981 ttttagtattgataatctctaaacgtaaatcctagtctcgtagcaatatcatagttaagg 3040 Query: 128 tgacnnnnnnnncagaataaacttaaagcacgaaa 162 |||| ||||||||||||||||||||||| Sbjct: 3041 tgacttttttttcagaataaacttaaagcacgaaa 3075 \# anon- EST:Posey107 = new ? >anon- EST:Posey107 ggcacgagaa agatccatgt tgcatcctcg gcagttgtgt gttgtttatg ccgagaattg gagcgcatcg acaagttaca gcaaatgttg catcatattg ttgccctgct gcctgttgtg ctggcaaatg aagtggaaat tgagtctgct cttgttgact gcggttgcat ttcctttttt tttttttttt Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003636 |gb|AE003636| arm:2L 12386446..12632675 estimated- cyto:33E3-33F2 gadfly- seqname:AE003636 seq_release:3 Length = 246230 Score = 302 bits (157), Expect = 2e-81 Genome Map Identities = 159/160 (99%) Strand = Plus / Minus Query: 14 tccatgttgcatcctcggcagttgtgtgttgtttatgccgagaattggagcgcatcgaca 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120382 tccatgttgcatcctcggcagttgtgtgttgtttatgccgagaattggagcgcatcgaca 120323 Query: 74 agttacagcaaatgttgcatcatattgttgccctgctgcctgttgtgctggcaaatgaag 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120322 agttgcagcaaatgttgcatcatattgttgccctgctgcctgttgtgctggcaaatgaag 120263 Query: 134 tggaaattgagtctgctcttgttgactgcggttgcatttc 173 |||||||||||||||||||||||||||||||||||||||| Sbjct: 120262 tggaaattgagtctgctcttgttgactgcggttgcatttc 120223 \# anon- EST:Posey11 = CG8086? >anon- EST:Posey11 ggcacgaggg tatctgtatc tctgacatga tcaacaatca tctcaactca gtgaaaacgt ttttatgttc tttcgacttc atttcacgct ctccaaaact gcgaattaaa tatgagctca ttcccaaaat ttagacaatt tccaggcggc caacttgggg gcttttacgc ccaaatacgg cggccgacgt ttcctttagc ccacattgag ttgtccgaaa aagccagttc ggaattgggt ttccagacgg cagatcgacc cacgcagaaa ctccatgact ccgcgatata tagacataca gccaaatagc cataattcgt gtgctgtctc tattaactat tgcctctttt tttttgtaaa agtttaatta acgccgaaca agttgagcaa ttcctttcca aaaacagaaa acgacaacaa gtgagtgagc cagccggcaa aaggccaaag gccgaaaaga gctggtaaat gaaaacatga gagccaagaa gcaaaactga actctcgtga ttgtgataaa aacgccaaga ccgactgacg tcagctgtgt gaactagttt gcgatcgtcc aaatctaatt aagtttctca acattctcgg tgctctgcag cgcgaacgtg ttttggcttt gaaaaccaag agaaagctgg gaaatgaggc gggaaaaatt ggcaaaccct cactgaaact tggttctcaa ggcacaaggc caatgttttc aaatagctgt tgataattac taaatttaat gggggaccat cacacatccg tttccaaatt ctagagcctg agatcactgg ctgctgctga cacaatttgc atgtttggat acataaatat ccgtttgggt cattttataa atatttattt agcgattatt gcatttcccc ttagcagctt atttttctat ttaacctttt accattcgtt actttgttat tttgtatctt tttttttttt tttgtttttg gccaacgcgc ttttgtgttg tgcctgcgcc ataatcagtg actttgaaaa atgagctgct gactcgggtc gaccggttat tagagctgat gtcatgggct tcgtgggaca agtgaagtaa aggtatcaag aaccgcggaa gggttacatc tatgccaaca agtgacatca atacgggaac gcgattgtca ttgactaaac aatgggagga gctgggtgga tttatttggg ggcggagcag aacagctgac tggcggtggg gaaacctagc cctatgccac caggaaatgc caatagttag acagacagac agtcaatgaa ctttggggtc gggtcagcac gcaatcccac tggctgctcc ggtcgggctc cacctgactt ggttaacgcc tactccagtt tatccttacc gcaggctact ttacgatttc gggtatctcg tcctgtttcc gttgtatcgt gtgatttccg taactttctt ttacacagta aaaaacttca ctttattgcg gtgctaatag cgcgtagtgc atacagtcct tgccaggatt agtcgcgatt tttgggcgat attcaaaaca tctgttcacc cgaaagagat tgctatattc gttgttattg tagttgggtt tcgtggctga tttattattt cgttgattcg ttcgttgatt gggttcaagt gacagccgct ttcgagtgtc ggtctgccga ctggcgtttg aagtctacta gaggttttca aaacaaaaca cactttgctg atttatttat accgattgga ttggccgcta tgagctgagt ttgtttcagt gaaagagaag agagctagct agaaccgca Database: dmel_all_transcript_r320 >CG8086-RA type=mRNA; loc= 2L:complement (8236776..8236963,8237201..8237454, 8244459..8244764,8244826..8245006,8249309..8249733); ID=CG8086-RA; name=CG8086-RA; db_xref='CG8086,FlyBase:FBgn0032010'; len=1354 Length = 1354 Genome Map Score = 821 bits (427), Expect = 0.0 Identities = 427/427 (100%) Strand = Plus / Minus Query: 1378 accgcaggctactttacgatttcgggtatctcgtcctgtttccgttgtatcgtgtgattt 1437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 accgcaggctactttacgatttcgggtatctcgtcctgtttccgttgtatcgtgtgattt 368 Query: 1438 ccgtaactttcttttacacagtaaaaaacttcactttattgcggtgctaatagcgcgtag 1497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 ccgtaactttcttttacacagtaaaaaacttcactttattgcggtgctaatagcgcgtag 308 Query: 1498 tgcatacagtccttgccaggattagtcgcgatttttgggcgatattcaaaacatctgttc 1557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 tgcatacagtccttgccaggattagtcgcgatttttgggcgatattcaaaacatctgttc 248 Query: 1558 acccgaaagagattgctatattcgttgttattgtagttgggtttcgtggctgatttatta 1617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 acccgaaagagattgctatattcgttgttattgtagttgggtttcgtggctgatttatta 188 Query: 1618 tttcgttgattcgttcgttgattgggttcaagtgacagccgctttcgagtgtcggtctgc 1677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tttcgttgattcgttcgttgattgggttcaagtgacagccgctttcgagtgtcggtctgc 128 Query: 1678 cgactggcgtttgaagtctactagaggttttcaaaacaaaacacactttgctgatttatt 1737 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 cgactggcgtttgaagtctactagaggttttcaaaacaaaacacactttgctgatttatt 68 Query: 1738 tataccgattggattggccgctatgagctgagtttgtttcagtgaaagagaagagagcta 1797 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 tataccgattggattggccgctatgagctgagtttgtttcagtgaaagagaagagagcta 8 Query: 1798 gctagaa 1804 ||||||| Sbjct: 7 gctagaa 1 \# anon- EST:Posey117 = CG3257 >anon- EST:Posey117 ggcacgagcg gcacttttgt gccattttac acccaaatcg atggtgtttt ttttggggaa aacttaaaac caagttagct ccatcgaaat ggcgatacga acctagttac tcgaacaaac gaatatgcaa acttagtctg aaggtcaatt ggtcctcatt tagagtcgtt gaatgttcat tacttgcttt ccgtgtgcgt tgacgacatt taccgaagat ggatctggtt tcactggaca aatccactcc gattagcact cgaaaatcga aagatagtga agcaaaaccg actaagtctg ttagctgtta gatggaagta ggaaattaca aataaaacgc gtaggaaaag cgaatcgata ccaagtactt tttccaagta gctaagtagc tgagtaagag aggagcccga actcgcatca gcatagaaat aattcgaaag ggatcgtagg aagtgtaagg attgtatttc gggctctggg aggttttcaa agtcggactc ctgtgcttga aaaacatata taaatgtacg aatatactaa acacctcaaa aaa Database: dmel_all_transcript_r320 >CG3257-RA type=mRNA; loc= 2R:join (19160357..19160540,19163153..19163174, 19163464..19163822,19164280..19164389,19164460..19165042, 19165101..19165402,19165478..19166838); ID=CG3257-RA; name=CG3257-RA; db_xref='CG3257,FlyBase:FBgn0034978'; len=2921 Length = 2921 Genome Map Score = 983 bits (511), Expect = 0.0 Identities = 530/541 (97%), Gaps = 1/541 (0%) Strand = Plus / Plus Query: 9 cggcacttttgtgccattttacacccaaatcgatggtgnnnnnnnn-ggggaaaacttaa 67 |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2375 cggcacttttgtgccattttacacccaaatcgatggtgtttttttttggggaaaacttaa 2434 Query: 68 aaccaagttagctccatcgaaatggcgatacgaacctagttactcgaacaaacgaatatg 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2435 aaccaagttagctccatcgaaatggcgatacgaacctagttactcgaacaaacgaatatg 2494 Query: 128 caaacttagtctgaaggtcaattggtcctcatttagagtcgttgaatgttcattacttgc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2495 caaacttagtctgaaggtcaattggtcctcatttagagtcgttgaatgttcattacttgc 2554 Query: 188 tttccgtgtgcgttgacgacatttaccgaagatggatctggtttcactggacaaatccac 247 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2555 tttccgtgtacgttgacgacatttaccgaagatggatctggtttcactggacaaatccac 2614 Query: 248 tccgattagcactcgaaaatcgaaagatagtgaagcaaaaccgactaagtctgttagctg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2615 tccgattagcactcgaaaatcgaaagatagtgaagcaaaaccgactaagtctgttagctg 2674 Query: 308 ttagatggaagtaggaaattacaaataaaacgcgtaggaaaagcgaatcgataccaagta 367 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2675 ttagatggaagtaggaaattacaagtaaaacgcgtaggaaaagcgaatcgataccaagta 2734 Query: 368 ctttttccaagtagctaagtagctgagtaagagaggagcccgaactcgcatcagcataga 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2735 ctttttccaagtagctaagtagctgagtaagagaggagcccgaactcgcatcagcataga 2794 Query: 428 aataattcgaaagggatcgtaggaagtgtaaggattgtatttcgggctctgggaggtttt 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2795 aataattcgaaagggatcgtaggaagtgtaaggattgtatttcgggctctgggaggtttt 2854 Query: 488 caaagtcggactcctgtgcttgaaaaacatatataaatgtacgaatatactaaacacctc 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2855 caaagtcggactcctgtgcttgaaaaacatatataaatgtacgaatatactaaacacctc 2914 Query: 548 a 548 | Sbjct: 2915 a 2915 \# anon- EST:Posey119 = ? end of MTA-like ? >anon- EST:Posey119 ggcacgagaa acaaactaac agagagacaa gcaacagaag caaatcaaac agagctatat acataattat atacctatat atatatatta tatacagata tacagtataa cagtacatac atggcgcatt ggtcaagaac agtacgcata atccttttta cagagcaaga aactgacgaa gacgacgacg tgacggccag acaagcaacc gaaaaagttt tccaaataaa attttaaaac taaacatttt tcctaaaaa Database: dmel_all_scaffolds_r310 gadfly| SEG:AE003602 |gb|AE003602| arm:3R 1266332..1562422 estimated- cyto:83A3-83C1 gadfly- seqname:AE003602 seq_release:3 Length = 296091 Score = 289 bits (150), Expect = 3e-77 Genome Map Identities = 150/150 (100%) Strand = Plus / Minus Query: 110 acagtacatacatggcgcattggtcaagaacagtacgcataatcctttttacagagcaag 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198187 acagtacatacatggcgcattggtcaagaacagtacgcataatcctttttacagagcaag 198128 Query: 170 aaactgacgaagacgacgacgtgacggccagacaagcaaccgaaaaagttttccaaataa 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198127 aaactgacgaagacgacgacgtgacggccagacaagcaaccgaaaaagttttccaaataa 198068 Query: 230 aattttaaaactaaacatttttcctaaaaa 259 |||||||||||||||||||||||||||||| Sbjct: 198067 aattttaaaactaaacatttttcctaaaaa 198038 Score = 91.1 bits (47), Expect = 1e-17 Genome Map Identities = 47/47 (100%) Strand = Plus / Minus Query: 9 aaacaaactaacagagagacaagcaacagaagcaaatcaaacagagc 55 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198288 aaacaaactaacagagagacaagcaacagaagcaaatcaaacagagc 198242 Score = 37.2 bits (19), Expect = 0.19 Genome Map Identities = 27/31 (87%) Strand = Plus / Minus Query: 218 ttttccaaataaaattttaaaactaaacatt 248 ||||| ||||| |||| ||||||||||||| Sbjct: 219884 ttttcttaataatatttaaaaactaaacatt 219854 \# anon- EST:Posey126 = ? end of Df31 ? >anon- EST:Posey126 ggcacgaggt tttttttttt ttaaaatgct ttcgaaatcg tacctttttt atttgtaatc aaggtaccac ctatttcaca ttcccaatta cattttattt acttgtctaa gcctacgaaa tagtctgcga cgaaactctc attaatgttc aatgtttaac aacgatttaa tgggcaggaa aggtaatggc cagtaaatcc agcattcagc aaaatcaaga ttcgagatta ttaaaaaata aaatgaaacg taaaaattaa aatcaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003781 |gb|AE003781| arm:2L 21394058..21699819 estimated- cyto:39E1-40B1 gadfly- seqname:AE003781 seq_release:3 Length = 305762 Score = 402 bits (209), Expect = e-111 Genome Map Identities = 209/209 (100%) Strand = Plus / Minus Query: 23 aaaatgctttcgaaatcgtaccttttttatttgtaatcaaggtaccacctatttcacatt 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65900 aaaatgctttcgaaatcgtaccttttttatttgtaatcaaggtaccacctatttcacatt 65841 Query: 83 cccaattacattttatttacttgtctaagcctacgaaatagtctgcgacgaaactctcat 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65840 cccaattacattttatttacttgtctaagcctacgaaatagtctgcgacgaaactctcat 65781 Query: 143 taatgttcaatgtttaacaacgatttaatgggcaggaaaggtaatggccagtaaatccag 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65780 taatgttcaatgtttaacaacgatttaatgggcaggaaaggtaatggccagtaaatccag 65721 Query: 203 cattcagcaaaatcaagattcgagattat 231 ||||||||||||||||||||||||||||| Sbjct: 65720 cattcagcaaaatcaagattcgagattat 65692 \# anon- EST:Posey139 = end of BEST:GH08269 ? >anon- EST:Posey139 ggcacgaggg agcaaggaga tttggcggag gagccgataa caacaataat gaaattaatg gagtaaacca attaaatcca tggaattccc aaatctaaaa taaaagctaa cttaatacgt ttttatttga atgaaagagt aacaaatcga ttgtaatatt gtatttcttg tgggcgtaaa acatcgacaa acgctcgacc cgttttacta gcatttaaaa caactattat ttaagagcat tttaaacatg aaaaaagaaa ataaaatcgg cagctacgcg cttctatcaa aagcacaatt gtaaaaagtc aatccagctc agctgcaatg aatgaatgaa gtctcccgaa tgaaaatgtt aaacgaaaaa acccgaacaa caaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003541 |gb|AE003541| arm:3L 12268628..12534151 estimated- cyto:69B1-69C8 gadfly- seqname:AE003541 seq_release:3 Length = 265524 Score = 640 bits (333), Expect = 0.0 Genome Map Identities = 360/379 (94%), Gaps = 1/379 (0%) Strand = Plus / Plus Query: 9 ggagcaaggagatttggcggaggagccgataacaacaataatgaaattaatggagtaaac 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208657 ggagcaaggagatttggcggaggagccgataacaacaataatgaaattaatggagtaaac 208716 Query: 69 caattaaatccatggaattcccaaatctaaaataaaagctaacttaatacgtttttattt 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208717 caattaaatccatggaattcccaaatctaaaataaaagctaacttaatacgtttttattt 208776 Query: 129 gaatgaaagagtaacaaatcgattgtaatattgtatttcttgtgggcgtaaaacatcgac 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208777 gaatgaaagagtaacaaatcgattgtaatattgtatttcttgtgggcgtaaaacatcgac 208836 Query: 189 aaacgctcgacccgttttactagcatttaaaacaactattatttaagagcattttaaaca 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208837 aaacgctcgacccgttttactagcatttaaaacaactattatttaagagcattttaaaca 208896 Query: 249 tg-nnnnnnnnnnnnnnnntcggcagctacgcgcttctatcaaaagcacaattgtaaaaa 307 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 208897 tgaaaaaaagaaaataaaatcggcagctacgcgcttctatcaaaagcacaattgtaaaaa 208956 Query: 308 gtcaatccagctcagctgcaatgaatgaatgaagtctcccgaatgaaaatgttaaacgaa 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208957 gtcaatccagctcagctgcaatgaatgaatgaagtctcccgaatgaaaatgttaaacgaa 209016 Query: 368 aaaacccgaacaacaaaaa 386 ||||||| ||||| ||||| Sbjct: 209017 aaaaccccaacaaaaaaaa 209035 \# anon- EST:Posey146 = new? >anon- EST:Posey146 ggcacgaggg acattttaat gttaaaatca tggctatttt tccataaaca attacgccgt gattcggcgc tcgatatttt cactgagcgg tgattaattg atgaaaggac agtgtgtgga actgcagggt gtatataaaa ggaattataa atatgtgtat ttgtactcag cacttactga ggacaaagag atgctctgtt ggcactacaa tattaataag taacatattt gaaagttcgt ttgcgtgtta aaggctctag gtgcaaagcc ggacagcgat gaataaaaat aaatagtttc gttatatatc tgattgttta cttgacaaat aaagaataaa actgaaaaaa aaaaaaaaaa aa >gadfly| SEG:AABU01002756 |gb|AABU01002756| arm:U 6723424..6923036 estimated-cyto:? gadfly- seqname:AABU01002756 seq_release:3 Length = 199613 Score = 341 bits (177), Expect = 1e-92 Genome Map Identities = 177/177 (100%) Strand = Plus / Plus Query: 168 cagcacttactgaggacaaagagatgctctgttggcactacaatattaataagtaacata 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23411 cagcacttactgaggacaaagagatgctctgttggcactacaatattaataagtaacata 23470 Query: 228 tttgaaagttcgtttgcgtgttaaaggctctaggtgcaaagccggacagcgatgaataaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23471 tttgaaagttcgtttgcgtgttaaaggctctaggtgcaaagccggacagcgatgaataaa 23530 Query: 288 aataaatagtttcgttatatatctgattgtttacttgacaaataaagaataaaactg 344 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23531 aataaatagtttcgttatatatctgattgtttacttgacaaataaagaataaaactg 23587 Score = 312 bits (162), Expect = 5e-84 Genome Map Identities = 162/162 (100%) Strand = Plus / Plus Query: 9 ggacattttaatgttaaaatcatggctatttttccataaacaattacgccgtgattcggc 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22647 ggacattttaatgttaaaatcatggctatttttccataaacaattacgccgtgattcggc 22706 Query: 69 gctcgatattttcactgagcggtgattaattgatgaaaggacagtgtgtggaactgcagg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22707 gctcgatattttcactgagcggtgattaattgatgaaaggacagtgtgtggaactgcagg 22766 Query: 129 gtgtatataaaaggaattataaatatgtgtatttgtactcag 170 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 22767 gtgtatataaaaggaattataaatatgtgtatttgtactcag 22808 \# anon- EST:Posey152 = ? >anon- EST:Posey152 ggcacgaggt cgaaatatca ttttgaataa gttgctcaat ttgcttcgca aagtgattta ccgatttatc attctctatt ttcatatgtg tacaactaaa taaatgtatt gtaggcataa gctaaacaac acaataatgc aaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003795 |gb|AE003795| arm:2R 14519511..14767606 estimated- cyto:56D9-56E5 gadfly- seqname:AE003795 seq_release:3 Length = 248096 Score = 264 bits (137), Expect = 5e-70 Genome Map Identities = 137/137 (100%) Strand = Plus / Minus Query: 9 gtcgaaatatcattttgaataagttgctcaatttgcttcgcaaagtgatttaccgattta 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65060 gtcgaaatatcattttgaataagttgctcaatttgcttcgcaaagtgatttaccgattta 65001 Query: 69 tcattctctattttcatatgtgtacaactaaataaatgtattgtaggcataagctaaaca 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65000 tcattctctattttcatatgtgtacaactaaataaatgtattgtaggcataagctaaaca 64941 Query: 129 acacaataatgcaaaaa 145 ||||||||||||||||| Sbjct: 64940 acacaataatgcaaaaa 64924 \# anon- EST:Posey155 = ? >anon- EST:Posey155 ggcacgagaa agatttaact gtggacgttg agttgaagtg ttgaagaaca cacaaaagaa aaaaacacga ggaaaacgta acgtctcttt ggtaagaaaa aggaaaacct aaagagcaaa tgctgtcatc caaaaaccaa aaaaaaaaaa cacaaaaaaa tgaaactgaa ctttttctga atcaataaaa gacaaattga tttcctgttg gaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003795 |gb|AE003795| arm:2R 14519511..14767606 estimated- cyto:56D9-56E5 gadfly- seqname:AE003795 seq_release:3 Length = 248096 Score = 264 bits (137), Expect = 5e-70 Genome Map Identities = 137/137 (100%) Strand = Plus / Minus Query: 9 gtcgaaatatcattttgaataagttgctcaatttgcttcgcaaagtgatttaccgattta 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65060 gtcgaaatatcattttgaataagttgctcaatttgcttcgcaaagtgatttaccgattta 65001 Query: 69 tcattctctattttcatatgtgtacaactaaataaatgtattgtaggcataagctaaaca 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65000 tcattctctattttcatatgtgtacaactaaataaatgtattgtaggcataagctaaaca 64941 Query: 129 acacaataatgcaaaaa 145 ||||||||||||||||| Sbjct: 64940 acacaataatgcaaaaa 64924 \# anon- EST:Posey156 = EST GM16138 >anon- EST:Posey156 ggcacgagtc tgtttggggt attgtccaat tggttttaat gggtctattc ttctacataa atagtgtagc cctcattgag gacttacctc ttgaggagga ataccattcg ttggaagatt tttatgcagc tgcaaataga gcatacaatc agaatgccta caactgctgg attgccgcat gtatatatgt tttgactttg ttgctctccg cccagcaatt ttacatgaat agcagagtaa ctgccaacta atatttcaga tgtagtttcc caactactta aaactagtat tgaaattttc ccttcgatat atttgttaga ggtgttttcc ttttaataaa gttaaagttc aatttaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003795 |gb|AE003795| arm:2R 14519511..14767606 estimated- cyto:56D9-56E5 gadfly- seqname:AE003795 seq_release:3 Length = 248096 Score = 264 bits (137), Expect = 5e-70 Genome Map Identities = 137/137 (100%) Strand = Plus / Minus Query: 9 gtcgaaatatcattttgaataagttgctcaatttgcttcgcaaagtgatttaccgattta 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65060 gtcgaaatatcattttgaataagttgctcaatttgcttcgcaaagtgatttaccgattta 65001 Query: 69 tcattctctattttcatatgtgtacaactaaataaatgtattgtaggcataagctaaaca 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65000 tcattctctattttcatatgtgtacaactaaataaatgtattgtaggcataagctaaaca 64941 Query: 129 acacaataatgcaaaaa 145 ||||||||||||||||| Sbjct: 64940 acacaataatgcaaaaa 64924 Database: na_est.dros >GM16138.complete AY118852 Length = 472 Score = 675 bits (351), Expect = 0.0 Identities = 351/351 (100%) Strand = Plus / Plus Query: 9 tctgtttggggtattgtccaattggttttaatgggtctattcttctacataaatagtgta 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 tctgtttggggtattgtccaattggttttaatgggtctattcttctacataaatagtgta 166 Query: 69 gccctcattgaggacttacctcttgaggaggaataccattcgttggaagatttttatgca 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 gccctcattgaggacttacctcttgaggaggaataccattcgttggaagatttttatgca 226 Query: 129 gctgcaaatagagcatacaatcagaatgcctacaactgctggattgccgcatgtatatat 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gctgcaaatagagcatacaatcagaatgcctacaactgctggattgccgcatgtatatat 286 Query: 189 gttttgactttgttgctctccgcccagcaattttacatgaatagcagagtaactgccaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 gttttgactttgttgctctccgcccagcaattttacatgaatagcagagtaactgccaac 346 Query: 249 taatatttcagatgtagtttcccaactacttaaaactagtattgaaattttcccttcgat 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 taatatttcagatgtagtttcccaactacttaaaactagtattgaaattttcccttcgat 406 Query: 309 atatttgttagaggtgttttccttttaataaagttaaagttcaatttaaaa 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 atatttgttagaggtgttttccttttaataaagttaaagttcaatttaaaa 457 \# anon- EST:Posey171 = CG12187 >anon- EST:Posey171 ggcacgaggc gaaaccggaa acggaagcgc aggcgaacgc ttggagccca cctacataca actcgtattc gtagttaaga aacacattaa cgaagtgcta aacggaggag agagataagt gcagaatcat tttcgagagc taactgaatt tactcgttta ccttatagca gatgctttgt agctatgtaa ctcctgtcag atgggtgata acttaacatt gatttcgatc acgacacatt gtatagacta cctacttcgt aatcgtaact cgtaactgta actgtaactc taaccttata ttgtaactgt aactaatacc tgtaactgaa ttatgtacta aatttatgag aaacctttac aaaagtcact tgggcaggtg caaaggtccc tgaaaagagc tccctgggag atggaattgt gaaaaactga tgaaattttt ttagattatc cgcactaacc gccgctcgag gttgagatat tcatttcaaa accaatatgt ataaatttac aactcaacgc tatacgatac ttgaatatat atctatatac aaacagttaa tagtcactaa tgcgtatacc agcgtaccga aatgtgctag caacctaaat ttaactgaaa aacggctaac aaagaaatgt gaaaataaag tctctctatt taactgcaaa acaaaacgaa aaa Database: dmel_all_transcript_r320 >CG12187-RA type=mRNA; loc= 3L:complement (2651232..2653522,2653694..2653913, 2654215..2654339,2659167..2659408,2659527..2659781, 2659842..2660098,2660248..2660496,2662850..2663190, 2665182..2665317,2670118..2670316); ID=CG12187-RA; name=CG12187-RA; db_xref='CG12187,FlyBase:FBgn0035367'; len=4315 Length = 4315 Genome Map Score = 1250 bits (650), Expect = 0.0 Identities = 657/664 (98%) Strand = Plus / Plus Query: 9 gcgaaaccggaaacggaagcgcaggcgaacgcttggagcccacctacatacaactcgtat 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3652 gcgaaaccggaaacggaagcgcaggcgaacgcttggagcccacctacatacaactcgtat 3711 Query: 69 tcgtagttaagaaacacattaacgaagtgctaaacggaggagagagataagtgcagaatc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3712 tcgtagttaagaaacacattaacgaagtgctaaacggaggagagagataagtgcagaatc 3771 Query: 129 attttcgagagctaactgaatttactcgtttaccttatagcagatgctttgtagctatgt 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3772 attttcgagagctaactgaatttactcgtttaccttatagcagatgctttgtagctatgt 3831 Query: 189 aactcctgtcagatgggtgataacttaacattgatttcgatcacgacacattgtatagac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3832 aactcctgtcagatgggtgataacttaacattgatttcgatcacgacacattgtatagac 3891 Query: 249 tacctacttcgtaatcgtaactcgtaactgtaactgtaactctaaccttatattgtaact 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3892 tacctacttcgtaatcgtaactcgtaactgtaactgtaactctaaccttatattgtaact 3951 Query: 309 gtaactaatacctgtaactgaattatgtactaaatttatgagaaacctttacaaaagtca 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3952 gtaactaatacctgtaactgaattatgtactaaatttatgagaaacctttacaaaagtca 4011 Query: 369 cttgggcaggtgcaaaggtccctgaaaagagctccctgggagatggaattgtgaaaaact 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4012 cttgggcaggtgcaaaggtccctgaaaagagctccctgggagatggaattgtgaaaaact 4071 Query: 429 gatgaaannnnnnnagattatccgcactaaccgccgctcgaggttgagatattcatttca 488 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4072 gatgaaatttttttagattatccgcactaaccgccgctcgaggttgagatattcatttca 4131 Query: 489 aaaccaatatgtataaatttacaactcaacgctatacgatacttgaatatatatctatat 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4132 aaaccaatatgtataaatttacaactcaacgctatacgatacttgaatatatatctatat 4191 Query: 549 acaaacagttaatagtcactaatgcgtataccagcgtaccgaaatgtgctagcaacctaa 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4192 acaaacagttaatagtcactaatgcgtataccagcgtaccgaaatgtgctagcaacctaa 4251 Query: 609 atttaactgaaaaacggctaacaaagaaatgtgaaaataaagtctctctatttaactgca 668 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4252 atttaactgaaaaacggctaacaaagaaatgtgaaaataaagtctctctatttaactgca 4311 Query: 669 aaac 672 |||| Sbjct: 4312 aaac 4315 \# anon- EST:Posey175 = end of CG13203 ? >anon- EST:Posey175 ggcacgagct cgtgccgaat tcggcacgag ccggcgtcca cgcgtagttc tagatggtac cgtataccca ttgaacccgt atttactgta tggcggaact caagcttatg tggacgctga gcctggccaa taattgtaga cccaacgtag atccttaaca ataaagagta ctagaagaca cctcaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003826 |gb|AE003826| arm:2R 6219987..6530078 estimated- cyto:47D5-47F15 gadfly- seqname:AE003826 seq_release:3 Length = 310092 Score = 246 bits (128), Expect = 1e-64 Genome Map Identities = 149/157 (94%), Gaps = 7/157 (4%) Strand = Plus / Plus Query: 31 ccggcgtccacgcgtagttctagatggtaccgtatacccattgaacccgtatttactgta 90 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 221679 ccggcgtccacgcgtagttctagatggtaccgtagacccattgaacccgtatttactgta 221738 Query: 91 tggcggaactcaagcttatgtggacgctgagcctggccaataattgtagacccaacgtag 150 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221739 tggc-------aagcttatgtggacgctgagcctggccaataattgtagacccaacgtag 221791 Query: 151 atccttaacaataaagagtactagaagacacctcaaa 187 ||||||||||||||||||||||||||||||||||||| Sbjct: 221792 atccttaacaataaagagtactagaagacacctcaaa 221828 \# anon- EST:Posey178 = ? end CG31369 ? >anon- EST:Posey178 ggcacgaggg aagagctgca acagtaattt gaatttggaa tgcaccggag ggaacgagag cgctgcaaat tgtgtacata ttttgtctct gtctgtttcc ggtcgcctgc cattgtgtgc gtttgcttga gcttgtgcct gtgtgtgtga ttgtgggtgt atttcgtgta aataaatgct gtgcaaaaac agaaacagca acatcagaag aaacaggaat aacaagcgaa atggcaaaaa gtgcagttaa gcgtggaaat tgcattaaaa attgagcaaa aaaaaattgc gaaaacaaaa ggcggcgaaa agactaaaaa cggaacaaac aaagacgcaa aacgaaacgc tggagttaac gagcgctaaa aagcaaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003679 |gb|AE003679| arm:3R 4269603..4486596 estimated- cyto:85A1-85A5 gadfly- seqname:AE003679 seq_release:3 Length = 216994 Score = 494 bits (257), Expect = e-139 Genome Map Identities = 257/257 (100%) Strand = Plus / Minus Query: 9 ggaagagctgcaacagtaatttgaatttggaatgcaccggagggaacgagagcgctgcaa 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 ggaagagctgcaacagtaatttgaatttggaatgcaccggagggaacgagagcgctgcaa 586 Query: 69 attgtgtacatattttgtctctgtctgtttccggtcgcctgccattgtgtgcgtttgctt 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 attgtgtacatattttgtctctgtctgtttccggtcgcctgccattgtgtgcgtttgctt 526 Query: 129 gagcttgtgcctgtgtgtgtgattgtgggtgtatttcgtgtaaataaatgctgtgcaaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gagcttgtgcctgtgtgtgtgattgtgggtgtatttcgtgtaaataaatgctgtgcaaaa 466 Query: 189 acagaaacagcaacatcagaagaaacaggaataacaagcgaaatggcaaaaagtgcagtt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 acagaaacagcaacatcagaagaaacaggaataacaagcgaaatggcaaaaagtgcagtt 406 Query: 249 aagcgtggaaattgcat 265 ||||||||||||||||| Sbjct: 405 aagcgtggaaattgcat 389 Score = 37.2 bits (19), Expect = 0.29 Genome Map Identities = 19/19 (100%) Strand = Plus / Minus Query: 349 gctggagttaacgagcgct 367 ||||||||||||||||||| Sbjct: 305 gctggagttaacgagcgct 287 \# anon- EST:Posey186 = CG6549 >anon- EST:Posey186 ggcacgagct cgtgccgaat tcggcacgag ggacaatgcc aggcgaaaga acattcagca gtacgacgaa gtttacccca tgatggtaga ttattttgaa caggccttaa aggcacttcc ataaatgtct aatgtattat gtatctagaa ctatgtatgt atgtatgtaa gagcacgaat atgtttggaa taaacatatg catggcatcc ttctattaaa aa Database: dmel_all_transcript_r320 >CG6549-RC type=mRNA; loc= 2L:complement (17456524..17457196,17457255..17458325, 17458379..17459002,17459052..17459150); ID=fws-RC; name=fws-RC; db_xref='CG6549,FlyBase:FBgn0024689'; len=2467 Length = 2467 Genome Map Score = 364 bits (189), Expect = e-100 Identities = 189/189 (100%) Strand = Plus / Plus Query: 30 gggacaatgccaggcgaaagaacattcagcagtacgacgaagtttaccccatgatggtag 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2279 gggacaatgccaggcgaaagaacattcagcagtacgacgaagtttaccccatgatggtag 2338 Query: 90 attattttgaacaggccttaaaggcacttccataaatgtctaatgtattatgtatctaga 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2339 attattttgaacaggccttaaaggcacttccataaatgtctaatgtattatgtatctaga 2398 Query: 150 actatgtatgtatgtatgtaagagcacgaatatgtttggaataaacatatgcatggcatc 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2399 actatgtatgtatgtatgtaagagcacgaatatgtttggaataaacatatgcatggcatc 2458 Query: 210 cttctatta 218 ||||||||| Sbjct: 2459 cttctatta 2467 \# anon- EST:Posey204 = CG10071 >anon- EST:Posey204 gggcacgagc aaccagaaca agaaggccca tcgcaatggc atcaagcgcc cgctgcgcaa acgccacgag tccactctgg gtatggatgt gaaattcctg atcaaccagc gctacgcacg caagggaaac ctttcccgcg aggagtccgt gaagcgctac aacgagcgca tcgcttccca gaagggcaag ccaaagcctg ttactctgta gatgattgcc ccgcttgtgg ataattaaag gacaattcag tttaacaaaa a Database: dmel_all_transcript_r320 >CG10071-RC type=mRNA; loc= 2R:join (16337395..16337425,16337605..16337712, 16337782..16337961); ID=RpL29-RC; name=RpL29-RC; db_xref='CG10071,FlyBase:FBgn0016726'; len=319 Length = 319 Genome Map Score = 466 bits (241), Expect = e-131 Identities = 247/250 (98%) Strand = Plus / Plus Query: 18 caaccagaacaagaaggcccatcgcaatggcatcaagcgcccgctgcgcaaacgccacga 77 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 67 caaccagaacaagaaggcccatcgtaatggcatcaagcgcccgctgcgcaaacgccacga 126 Query: 78 gtccactctgggtatggatgtgaaattcctgatcaaccagcgctacgcacgcaagggaaa 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127 gtccactctgggtatggatgtgaaatttctgatcaaccagcgctacgcacgcaagggaaa 186 Query: 138 cctttcccgcgaggagtccgtgaagcgctacaacgagcgcatcgcttcccagaagggcaa 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 cctttcccgcgaggagtccgtgaagcgctacaacgagcgcatcgcttcccagaagggcaa 246 Query: 198 gccaaagcctgttactctgtagatgattgccccgcttgtggataattaaaggacaattca 257 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 247 gccaaagcctgttactctgtagatgattgccccgcgtgtggataattaaaggacaattca 306 Query: 258 gtttaacaaa 267 |||||||||| Sbjct: 307 gtttaacaaa 316 \# anon- EST:Posey215 = CG2985? >anon- EST:Posey215 ggcacgaggc gagtgggtat cttaagaaag actgtactta atatttaaga cactttggcc tgcgctttta ccaatatttt tgtggcccaa cttggcccga actccttggt tccaacaata ttttgcattg atatgctaga gctaccaaca agtatatagt attaatattt ctaacaattc ggaatgtgca cttaactaag cgaagattga aactaaaaat cagaagatgg aaacatccta tttaaatagg tggaagttta aataagcaaa agtctctcgc ctaagccctg atcctaaact cttggctgta tttctaattg ttatcgcttc atgttgaggt ttattgttat aacgccagcc tcccatgagc aatactcccc ccaaattacc gtaaacaaat tattttctaa tctgagccca agccataagt ggagaagatt agacctcaac accacaaaaa caccgacaac aataaaataa atctaagttt acaaaaccaa aaa Database: dmel_all_transcript_r320 >CG2985-RA type=mRNA; loc= X:join (9793758..9794044,9794122..9795724); Genome Map ID=Yp1-RA; name=Yp1-RA; db_xref='CG2985,FlyBase:FBgn0004045'; len=1890 Length = 1890 Score = 431 bits (224), Expect = e-120 Identities = 224/224 (100%) Strand = Plus / Minus Query: 278 cgcctaagccctgatcctaaactcttggctgtatttctaattgttatcgcttcatgttga 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1890 cgcctaagccctgatcctaaactcttggctgtatttctaattgttatcgcttcatgttga 1831 Query: 338 ggtttattgttataacgccagcctcccatgagcaatactccccccaaattaccgtaaaca 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1830 ggtttattgttataacgccagcctcccatgagcaatactccccccaaattaccgtaaaca 1771 Query: 398 aattattttctaatctgagcccaagccataagtggagaagattagacctcaacaccacaa 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1770 aattattttctaatctgagcccaagccataagtggagaagattagacctcaacaccacaa 1711 Query: 458 aaacaccgacaacaataaaataaatctaagtttacaaaaccaaa 501 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1710 aaacaccgacaacaataaaataaatctaagtttacaaaaccaaa 1667 \# anon- EST:Posey216 = end of CG32423 >anon- EST:Posey216 ggcacgaggg gagaataagc ataagcttac aaagaccgag aagaaatggg gaatcttgta ctagttttta gcatattttt tgtgctcatc agtcgattta atgaatgaat tttttgtagc tgtctacagt tttttacgtt aactgttttt tagacatatt aatgaggaaa gtaaaaacca acaaaaacaa cctagaaata gtatattttt tctgcatatg acaagttgtt gaggaaagag aagaacgatg tttgattagc atggaaacca agaggcaaac actttttaaa agggaatagc gaaacaaacc gaggcaacac acaaaagtag cgaaacacag aaaacagaaa ataaaatttg aaactgtaga attgtagttt agctttgtga aggctggcga agaatgtacg attttttgaa ggatcagcta ggatcgaaaa gaacaacagc aacaacaaca gcagcagcaa caacaactgg cacaggcagt agcagaaatg tataacaaaa accaagaaaa ttaatgttaa attaaacaac aaaaaagaaa aaacaaaata atgaagtaag atagaagaaa ctacgtttag taaacttagt taataagcga agatttcttt agtcttgtaa gcgtctctta agtagagttg aacatgaagt tgagtatgga gtttagaatt gaaattaaac ctttgtcaaa gcctagcata tttatttttc cgagacacac acacacacac tgacacacaa acacagcaag acacaccaac acggacgcac ctatcaagcc taagcattgt atttgtgatt ttttcgaatg ttaattgatt aacgaaacac gatgagcaaa ataagcgaaa caagggaaac atcaagtggg cgatgtgggt gggagatagt gtggcgaagt gagaaatttt tgagaatctc cgtttgagca aggacaccct ctcaccacaa acaacattcc tgagcaaagt ctttgatttg attttgatat aaaaaaaatt tgtatgtgtt gatacgattt gattttcgag tttagagctg tcgagtcgcc taactgaact atctacatat atatatacat tatatatata tacatatata tatatataaa aacgtagaaa cacaacgcca aaagtcttcc taagcctaaa accaaaacaa caacataatg caaatgtttt tttttttatt cgattattt gctttagact gactacgaac tgaaactgta acaataacaa caaatgcagg attgtcaacc caaaaacaaa aa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003567 |gb|AE003567| arm:3L 5083015..5237352 estimated- cyto:64C9-64C12 gadfly- seqname:AE003567 seq_release:3 Length = 154338 Score = 833 bits (433), Expect = 0.0 Genome Map Identities = 433/433 (100%) Strand = Plus / Minus Query: 9 gggagaataagcataagcttacaaagaccgagaagaaatggggaatcttgtactagtttt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36359 gggagaataagcataagcttacaaagaccgagaagaaatggggaatcttgtactagtttt 36300 Query: 69 tagcatattttttgtgctcatcagtcgatttaatgaatgaattttttgtagctgtctaca 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36299 tagcatattttttgtgctcatcagtcgatttaatgaatgaattttttgtagctgtctaca 36240 Query: 129 gttttttacgttaactgttttttagacatattaatgaggaaagtaaaaaccaacaaaaac 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36239 gttttttacgttaactgttttttagacatattaatgaggaaagtaaaaaccaacaaaaac 36180 Query: 189 aacctagaaatagtatattttttctgcatatgacaagttgttgaggaaagagaagaacga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36179 aacctagaaatagtatattttttctgcatatgacaagttgttgaggaaagagaagaacga 36120 Query: 249 tgtttgattagcatggaaaccaagaggcaaacactttttaaaagggaatagcgaaacaaa 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36119 tgtttgattagcatggaaaccaagaggcaaacactttttaaaagggaatagcgaaacaaa 36060 Query: 309 ccgaggcaacacacaaaagtagcgaaacacagaaaacagaaaataaaatttgaaactgta 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36059 ccgaggcaacacacaaaagtagcgaaacacagaaaacagaaaataaaatttgaaactgta 36000 Query: 369 gaattgtagtttagctttgtgaaggctggcgaagaatgtacgattttttgaaggatcagc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35999 gaattgtagtttagctttgtgaaggctggcgaagaatgtacgattttttgaaggatcagc 35940 Query: 429 taggatcgaaaag 441 ||||||||||||| Sbjct: 35939 taggatcgaaaag 35927 Score = 565 bits (294), Expect = e-160 Genome Map Identities = 302/310 (97%) Strand = Plus / Minus Query: 767 caacacggacgcacctatcaagcctaagcattgtatttgtgattttttcgaatgttaatt 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35601 caacacggacgcacctatcaagcctaagcattgtatttgtgattttttcgaatgttaatt 35542 Query: 827 gattaacgaaacacgatgagcaaaataagcgaaacaagggaaacatcaagtgggcgatgt 886 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35541 gattaacgaaacacgatgagcaaaataagcgaaacaagggaaacatcaagtgggcgatgt 35482 Query: 887 gggtgggagatagtgtggcgaagtgagaaatttttgagaatctccgtttgagcaaggaca 946 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35481 gggtgggagatagtgtggcgaagtgagaaatttttgagaatctccgtttgagcaaggaca 35422 Query: 947 ccctctcaccacaaacaacattcctgagcaaagtctttgatttgattttgatatnnnnnn 1006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35421 ccctctcaccacaaacaacattcctgagcaaagtctttgatttgattttgatataaaaaa 35362 Query: 1007 nntttgtatgtgttgatacgatttgattttcgagtttagagctgtcgagtcgcctaactg 1066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35361 aatttgtatgtgttgatacgatttgattttcgagtttagagctgtcgagtcgcctaactg 35302 Query: 1067 aactatctac 1076 |||||||||| Sbjct: 35301 aactatctac 35292 Score = 404 bits (210), Expect = e-111 Genome Map Identities = 228/246 (92%) Strand = Plus / Minus Query: 478 tggcacaggcagtagcagaaatgtataacaaaaaccaagaaaattaatgttaaattaaac 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35890 tggcacaggcagtagcagaaatgtataacaaaaaccaagaaaattaatgttaaattaaac 35831 Query: 538 aacnnnnnnnnnnnnnnnnnntaatgaagtaagatagaagaaactacgtttagtaaactt 597 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 35830 aacaaaaaagaaaaaacaaaataatgaagtaagatagaagaaactacgtttagtaaactt 35771 Query: 598 agttaataagcgaagatttctttagtcttgtaagcgtctcttaagtagagttgaacatga 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35770 agttaataagcgaagatttctttagtcttgtaagcgtctcttaagtagagttgaacatga 35711 Query: 658 agttgagtatggagtttagaattgaaattaaacctttgtcaaagcctagcatatttattt 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35710 agttgagtatggagtttagaattgaaattaaacctttgtcaaagcctagcatatttattt 35651 Query: 718 ttccga 723 |||||| Sbjct: 35650 ttccga 35645 Score = 239 bits (124), Expect = 2e-61 Genome Map Identities = 144/157 (91%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 1126 agaaacacaacgccaaaagtcttcctaagcctaaaaccaaaacaacaacataatgcaaat 1185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35241 agaaacacaacgccaaaagtcttcctaagcctaaaaccaaaacaacaacataatgcaaat 35182 Query: 1186 gnnnnnnnnnnnatt-cgattatttgctttagactgactacgaactgaaactgtaacaat 1244 | ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35181 gtttttttttttattacgattatttgctttagactgactacgaactgaaactgtaacaat 35122 Query: 1245 aacaacaaatgcaggattgtcaacccaaaaacaaaaa 1281 |||||||||||||||||||| |||||||||||||||| Sbjct: 35121 aacaacaaatgcaggattgtaaacccaaaaacaaaaa 35085 \# anon- EST:Posey221 = CG3620 >anon- EST:Posey221 gcacgagcaa acaaacgcga acgcgaagga agcttcaaaa gagagacaag agcgtgaaaa ggaggtggag aggagctgcg gagaatctaa gtggctgtga gctgaaatac aaaaaaaaaa aaaacaagtg caaccaaata cagtgttacc tgttgtgagt aaacttaagg aaacgtggag agagcgagag agtgcgacag ccgactgatc aaactgtaaa tcttgcaatg ctcttcaaac tgaaattcgc aaggcgggaa aaaacaaaca aatataaata aacaagaata acaaacaaaa ataggtagca aaagcaggaa caacaaaagc cgaagccaat taattaaata catatctact tcagtacatt gtcgtgctgc catcaaacta aactaaatgt tgcgctgcgt cgaggatttt aaataaaagg gaacctgccg ctcggaagtt gtggcagaag tgcagcaagt gctgccgggc caagttcaat tagcccggaa aacggccatg tgatctgcta taaatgcgat tgtatataca cacacacaca taatcccgtt gggagcagcg atagataggg ccagtatata atatgtccgg aaattaagtg gactgtagaa aaa Database: dmel_all_transcript_r320 CG3620-RB type=mRNA; loc= X:join (4063242..4063771,4073412..4073456, 4089620..4090203,4090269..4090328,4094083..4094229, 4095087..4095166,4097656..4097892,4097961..4098127, 4098192..4098496,4098892..4099056,4099121..4099487, 4099683..4100946,4101011..4101167,4101232..4101321, 4102582..4103070); ID=norpA-RB; name=norpA-RB; db_xref='CG3620,FlyBase:FBgn0004625'; len=4687 Length = 4687 Genome Map Score = 414 bits (215), Expect = e-115 Identities = 245/264 (92%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 360 ttcagtacattgtcgtgctgccatcaaactaaactaaatgttgcgctgcgtcgaggattt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 ttcagtacattgtcgtgctgccatcaaactaaactaaatgttgcgctgcgtcgaggattt 590 Query: 420 taaataaaagggaacctgccgctcggaagttgtggcagaagtgcagcaagtgctgccggg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 taaataaaagggaacctgccgctcggaagttgtggcagaagtgcagcaagtgctgccggg 650 Query: 480 ccaagttcaattagcccggaaaacggccatgtgatctgctataaatgcgattgtatatnn 539 |||||||||||||||| | ||| | |||||||||||||||||||||||||||||||| Sbjct: 651 ccaagttcaattagccggaaaacggaccatgtgatctgctataaatgcgattgtatatac 710 Query: 540 nnnnnnnnnnntaatcccgttgggagcagcgatagatagggccagtatataatatgtccg 599 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 acacacacacataat-ccgttgggagcagcgatagatagggccagtatataatatgtccg 769 Query: 600 gaaattaagtggactgtagaaaaa 623 |||||||||||||||||||||||| Sbjct: 770 gaaattaagtggactgtagaaaaa 793 Score = 164 bits (85), Expect = 1e-39 Identities = 85/85 (100%) Strand = Plus / Plus Query: 8 caaacaaacgcgaacgcgaaggaagcttcaaaagagagacaagagcgtgaaaaggaggtg 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 caaacaaacgcgaacgcgaaggaagcttcaaaagagagacaagagcgtgaaaaggaggtg 506 Query: 68 gagaggagctgcggagaatctaagt 92 ||||||||||||||||||||||||| Sbjct: 507 gagaggagctgcggagaatctaagt 531 \# anon- EST:Posey226 = end of CG32712 ? >anon- EST:Posey226 ggcacgagtt tttttttttt tttttatacc taaacctatc tctttccttt ccgcgctagt tatttgttcc ctaaaggcat tttcatttct cgattttgtt tatgcaaatt aaaacattaa aaaaaaaaaa ataaacaaaa aaaaaattgt ataccaaaaa tgtgtataaa taatcgaggg aaagaaaagt ttgatatttc tcactaatta tatgtaattt cccttttact ttcgttttag ctattttgat tatgcacaag ttgaacgata tgaaagttgg tttcatgttt ttaagcacaa atgaaaattg aacttgatgt acgaatgagg caattcacgt ttaattggaa aacatcaatt ttgtttgcgt atgtacaatg attttgggtt ctgttgtggt ctggaagtac tatttcttca atgattgtac aattggctat cgtatctcat ttcgttttcc tatttatggg tgaaggcacg ccaaaacatc tagagtttg Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003444 |gb|AE003444| arm:X 8154224..8453909 estimated- cyto:7E7-8A2 gadfly- seqname:AE003444 seq_release:3 Length = 299686 Score = 679 bits (353), Expect = 0.0 Genome Map Identities = 353/353 (100%) Strand = Plus / Minus Query: 147 ttgtataccaaaaatgtgtataaataatcgagggaaagaaaagtttgatatttctcacta 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15777 ttgtataccaaaaatgtgtataaataatcgagggaaagaaaagtttgatatttctcacta 15718 Query: 207 attatatgtaatttcccttttactttcgttttagctattttgattatgcacaagttgaac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15717 attatatgtaatttcccttttactttcgttttagctattttgattatgcacaagttgaac 15658 Query: 267 gatatgaaagttggtttcatgtttttaagcacaaatgaaaattgaacttgatgtacgaat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15657 gatatgaaagttggtttcatgtttttaagcacaaatgaaaattgaacttgatgtacgaat 15598 Query: 327 gaggcaattcacgtttaattggaaaacatcaattttgtttgcgtatgtacaatgattttg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15597 gaggcaattcacgtttaattggaaaacatcaattttgtttgcgtatgtacaatgattttg 15538 Query: 387 ggttctgttgtggtctggaagtactatttcttcaatgattgtacaattggctatcgtatc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15537 ggttctgttgtggtctggaagtactatttcttcaatgattgtacaattggctatcgtatc 15478 Query: 447 tcatttcgttttcctatttatgggtgaaggcacgccaaaacatctagagtttg 499 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15477 tcatttcgttttcctatttatgggtgaaggcacgccaaaacatctagagtttg 15425 Score = 179 bits (93), Expect = 6e-44 Genome Map Identities = 93/93 (100%) Strand = Plus / Minus Query: 26 atacctaaacctatctctttcctttccgcgctagttatttgttccctaaaggcattttca 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15898 atacctaaacctatctctttcctttccgcgctagttatttgttccctaaaggcattttca 15839 Query: 86 tttctcgattttgtttatgcaaattaaaacatt 118 ||||||||||||||||||||||||||||||||| Sbjct: 15838 tttctcgattttgtttatgcaaattaaaacatt 15806 \# anon- EST:Posey232 = CG18815 >anon- EST:Posey232 ggcagagcca tagcactctt agaacgtacg aaagcccccg acccagcccg ttgcattcca actattcacg caatatggag cgcagtaaga gagtcacact gagagttata cgagtaggct ctctcgtagc ccaattatgg aaattatcac tgaaaaatca attcgaaaag caatcaatta ttatacacac acggtagcta tacctaatta aatgccaaaa tacaagcaat ttgcgaggga aattctccag cgcgagacgt ttcagagtat agaagcaact gactttgata tttcttcgct gctaattatt tcggtttact tatttgggac ttgttcgtat ttnaattgaa attaataaag ttgtattatc caagga Database: dmel_all_transcript_r320 >CG18815-RC type=mRNA; loc= 3L:join (11585749..11585782,11585875..11586033, 11586095..11586126,11586493..11587036, 11587113..11587531); ID=CG18815-RC; name=CG18815-RC; db_xref='CG18815,FlyBase:FBgn0042138'; len=1188 Length = 1188 Genome Map Score = 685 bits (356), Expect = 0.0 Identities = 363/367 (98%) Strand = Plus / Plus Query: 8 ccatagcactcttagaacgtacgaaagcccccgacccagcccgttgcattccaactattc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccatagcactcttagaacgtacgaaagcccccgacccagcccgttgcattccaactattc 867 Query: 68 acgcaatatggagcgcagtaagagagtcacactgagagttatacgagtaggctctctcgt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 acgcaatatggagcgcagtaagagagtcacactgagagttatacgagtaggctctctcgt 927 Query: 128 agcccaattatggaaattatcactgaaaaatcaattcgaaaagcaatcaattattataca 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 agcccaattatggaaattatcactgaaaaatcaattcgaaaagcaatcaattattataca 987 Query: 188 cacacggtagctatacctaattaaatgccaaaatacaagcaatttgcgagggaaattctc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 cacacggtagctatacctaattaaatgccaaaatacaagcaatttgcgagggaaattctc 1047 Query: 248 cagcgcgagacgtttcagagtatagaagcaactgactttgatatttcttcgctgctaatt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 cagcgcgagacgtttcagagtatagaagcaactgactttgatatttcttcgctgctaatt 1107 Query: 308 atttcggtttacttatttgggacttgttcgtatttnaattgaaattaataaagttgtatt 367 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1108 atttcggtttacttatttgggacttgttcgtatttaaattgaaattaataaagttatata 1167 Query: 368 atccaag 374 ||| ||| Sbjct: 1168 atcaaag 1174 \# anon- EST:Posey243 = CG32172 >anon- EST:Posey243 ggcacgagcg ctggcgcgcc acgccccccg cccctcccac tgtcacgcgc tcgccacgcc ccccagttgc cgccccatta gcagcgggca gatggacaac gtgtgggtgg cccacaagga catctagtaa cacgacgccc aacagcagcc gcaaggtctg atacgccgcc cgccacgccc atcgtgtttg ggcggcagag gaagcggtcc ggaagcggaa acggaaacgg aaacgggcga gcaaaatggt ggcgcggtat cgcgggcaag gcgacggcgc gtccacaaaa aataaccata gagacgttta aggcaaattc taaatgaaca aaagtataaa ccaaa Database: dmel_all_transcript_r320 >CG32172-RA type=mRNA; loc= 3L:complement (17348426..17350337); Genome Map ID=noe-RA; name=noe-RA; db_xref='CG32172,FlyBase:FBgn0026197'; len=1912 Length = 1912 Score = 540 bits (281), Expect = e-153 Identities = 281/281 (100%) Strand = Plus / Plus Query: 65 agttgccgccccattagcagcgggcagatggacaacgtgtgggtggcccacaaggacatc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agttgccgccccattagcagcgggcagatggacaacgtgtgggtggcccacaaggacatc 763 Query: 125 tagtaacacgacgcccaacagcagccgcaaggtctgatacgccgcccgccacgcccatcg 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tagtaacacgacgcccaacagcagccgcaaggtctgatacgccgcccgccacgcccatcg 823 Query: 185 tgtttgggcggcagaggaagcggtccggaagcggaaacggaaacggaaacgggcgagcaa 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 tgtttgggcggcagaggaagcggtccggaagcggaaacggaaacggaaacgggcgagcaa 883 Query: 245 aatggtggcgcggtatcgcgggcaaggcgacggcgcgtccacaaaaaataaccatagaga 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 aatggtggcgcggtatcgcgggcaaggcgacggcgcgtccacaaaaaataaccatagaga 943 Query: 305 cgtttaaggcaaattctaaatgaacaaaagtataaaccaaa 345 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 cgtttaaggcaaattctaaatgaacaaaagtataaaccaaa 984 \# anon- EST:Posey246 = CG5627 >anon- EST:Posey246 ggcacgagta ttcatagagt tgattgtttt gtctttaagc atagtggtga acaaattatg ttacaaaatt gcaaagtttt gctgtctgta aatacacgaa gtatcaatat ggatcttaaa cttaagcgtg cgcataaacg tggtattgtc cttggtctct agagccaaag ttacagtatt ctccaatctt cctcttccgc acggatcgcg aaagccccgc gatccatcag ttatgctata tacatatata tatatatata tatgtaccgt aatcgattat actttagcca aatcatatca ttagccgcct ctcactaatc ccatagacaa attgtttcct gctaagcttt aaggcagaaa gcgccaaaca aaaacaaaaa ctcgcttacg actacctaaa acatagataa tgacaaatat atatatacat acatacatac atatatatac actcagatcg ggacttgact tcactgtggg gccctttgag agggcacaac aaacgaaaca caaacggaaa ttgaaggcaa tctagttagg gatatagtat actataccaa ctaaattcaa actaacaaac aaaatattaa aatattatgt gaatatctac cagacaacta cgatcataca taaagtaaat atatatatat ataaatatat atttatggta aaggaattta actagttcgt acagaaaata ttaagagatt gtatgacagc aagaagtggt cctaagttca gatctattgg gatcggtagt ttaaggaatt gtcagggaac acgagcacgg acgacggaga gttttggatt aacggggact ctggagagca ataagtatgt gtatgtgtat gtagtttgta aaaggagatc ggcgtacatc caaaatacac acatacacac acatatatat atatatatat ctgaaaatat atataaaaaa tataactatt tttttgttag ctggctctgg atgttaacca caaataaagc ccagcaccca tatatatata tatatacata cctctttagc cgtgtatata tgtatatgat cgattgtatt tttcaaagtt caaagcgaga aataaaaaaa aataaaaaca aaaa Database: dmel_all_transcript_r320 >CG5627-GEF-RA type=mRNA; loc= X:join (14824267..14824389,14824570..14824903, 14825128..14825627,14825681..14826042,14826101..14826258, 14828653..14829779,14829848..14830051,14830263..14830313, 14830827..14831196,14831257..14831642,14831704..14832186, 14832614..14832709,14833027..14833284,14833343..14833582, 14833647..14833919,14833991..14834158,14840711..14840783, 14840861..14840907,14842082..14844776); ID=rab3-GEF-RA; name=rab3-GEF-RA; db_xref='CG5627,FlyBase:FBgn0030613'; len=7948 Length = 7948 Genome Map Score = 779 bits (405), Expect = 0.0 Identities = 429/453 (94%) Strand = Plus / Plus Query: 450 cactcagatcgggacttgacttcactgtggggccctttgagagggcacaacaaacgaaac 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7297 cactcagatcgggacttgacttcactgtggggccctttgagagggcacaacaaacgaaac 7356 Query: 510 acaaacggaaattgaaggcaatctagttagggatatagtatactataccaactaaattca 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7357 acaaacggaaattgaaggcaatctagttagggatatagtatactataccaactaaattca 7416 Query: 570 aactaacaaacaaaatattaaaatattatgtgaatatctaccagacaactacgatcatac 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7417 aactaacaaacaaaatattaaaatattatgtgaatatctaccagacaactacgatcatac 7476 Query: 630 ataaagtaannnnnnnnnnnnnnnnnnnnnnnnttatggtaaaggaatttaactagttcg 689 ||||||||| ||||||||||||||||||||||||||| Sbjct: 7477 ataaagtaaatatatatatatataaatatatatttatggtaaaggaatttaactagttcg 7536 Query: 690 tacagaaaatattaagagattgtatgacagcaagaagtggtcctaagttcagatctattg 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7537 tacagaaaatattaagagattgtatgacagcaagaagtggtcctaagttcagatctattg 7596 Query: 750 ggatcggtagtttaaggaattgtcagggaacacgagcacggacgacggagagttttggat 809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7597 ggatcggtagtttaaggaattgtcagggaacacgagcacggacgacggagagttttggat 7656 Query: 810 taacggggactctggagagcaataagtatgtgtatgtgtatgtagtttgtaaaaggagat 869 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7657 taacggggactctggagagcaataagtatgtgtatgtgtatgtagtttgtaaaaggagat 7716 Query: 870 cggcgtacatccaaaatacacacatacacacac 902 ||||||||||||||||||||||||||||||||| Sbjct: 7717 cggcgtacatccaaaatacacacatacacacac 7749 \# anon- EST:Posey247 = CG5119 >anon- EST:Posey247 ggcacgagcg atatgtaatt tttttcaatt cttttttctc aaattcaaac tttaagaaag ctttgtttag aaaaagaaac gcgacaacca tacactttta aaaaagcaaa gaaaaaacaa aaaaattgca aaagagttaa aataaaaacg aaaaaatgga aagcaaactg tgcagagaac agaagaatag aaagaaagaa agaaaaagaa aaccgccaga atatgagagt caagtttttg ctactttgaa aaaagagaga aaatacagaa taccaacagc tgaaaaaata tgttgacaaa tgaaaacaaa acataaatcg aaaaaactac aaaaaaatgg caaaacctat gttaaaacag caaa Database: dmel_all_transcript_r320 >CG5119-RG type=mRNA; loc= 2R:join (13205133..13205406,13207147..13208631, 13208701..13209008,13209076..13209969); ID=pAbp-RG; name=pAbp-RG; db_xref='CG5119,FlyBase:FBgn0003031'; len=2961 Length = 2961 Genome Map Score = 150 bits (78), Expect = 6e-36 Identities = 85/92 (92%) Strand = Plus / Plus Query: 7 agcgatatgtaannnnnnncaattcttttttctcaaattcaaactttaagaaagctttgt 66 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2607 agcgatatgtaatttttttcaattcttttttctcaaattcaaactttaagaaagctttgt 2666 Query: 67 ttagaaaaagaaacgcgacaaccatacacttt 98 |||||||||||||||||||||||||||||||| Sbjct: 2667 ttagaaaaagaaacgcgacaaccatacacttt 2698 Score = 127 bits (66), Expect = 6e-29 Identities = 68/69 (98%) Strand = Plus / Plus Query: 213 ccgccagaatatgagagtcaagtttttgctactttgaaaaaagagagaaaatacagaata 272 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2813 ccgcaagaatatgagagtcaagtttttgctactttgaaaaaagagagaaaatacagaata 2872 Query: 273 ccaacagct 281 ||||||||| Sbjct: 2873 ccaacagct 2881 \# anon- EST:Posey249 = CG5119 >anon- EST:Posey249 ggcacgagcg atatgtaatt tttttcaatt cttttttctc aaattcaaac tttaagaaag ctttgtttag aaaaagaaac gcgacaacca tacactttta aaaaagcaaa gaaaaaacaa aaaaattgca aaagagttaa aataaaaacg aaaaaatgga aagcaaactg tgcagagaac agaagaatag aaagaaagaa agaaaaagaa aaccgcaaga atatgagagt caagtttttg ctactttgaa aaaagagaga aaatacagaa taccaacagc tgaaaaaata tgttgacaaa tgaaaacaaa acataaatcg aaaaaactac aaaaaaatgg caaaacctat gtaaaaacag caaa Database: dmel_all_transcript_r320 >CG5119-RG type=mRNA; loc= 2R:join (13205133..13205406,13207147..13208631, 13208701..13209008,13209076..13209969); ID=pAbp-RG; name=pAbp-RG; db_xref='CG5119,FlyBase:FBgn0003031'; len=2961 Length = 2961 Genome Map Score = 150 bits (78), Expect = 6e-36 Identities = 85/92 (92%) Strand = Plus / Plus Query: 7 agcgatatgtaannnnnnncaattcttttttctcaaattcaaactttaagaaagctttgt 66 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2607 agcgatatgtaatttttttcaattcttttttctcaaattcaaactttaagaaagctttgt 2666 Query: 67 ttagaaaaagaaacgcgacaaccatacacttt 98 |||||||||||||||||||||||||||||||| Sbjct: 2667 ttagaaaaagaaacgcgacaaccatacacttt 2698 Score = 133 bits (69), Expect = 1e-30 Identities = 69/69 (100%) Strand = Plus / Plus Query: 213 ccgcaagaatatgagagtcaagtttttgctactttgaaaaaagagagaaaatacagaata 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2813 ccgcaagaatatgagagtcaagtttttgctactttgaaaaaagagagaaaatacagaata 2872 Query: 273 ccaacagct 281 ||||||||| Sbjct: 2873 ccaacagct 2881 >CG5119-RD type=mRNA; loc= 2R:join (13205087..13205150,13205226..13205406, 13207147..13208631,13208701..13209008, 13209076..13209969); ID=pAbp-RD; name=pAbp-RD; db_xref='CG5119,FlyBase:FBgn0003031'; len=2932 Length = 2932 Genome Map Score = 150 bits (78), Expect = 6e-36 Identities = 85/92 (92%) Strand = Plus / Plus Query: 7 agcgatatgtaannnnnnncaattcttttttctcaaattcaaactttaagaaagctttgt 66 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2578 agcgatatgtaatttttttcaattcttttttctcaaattcaaactttaagaaagctttgt 2637 Query: 67 ttagaaaaagaaacgcgacaaccatacacttt 98 |||||||||||||||||||||||||||||||| Sbjct: 2638 ttagaaaaagaaacgcgacaaccatacacttt 2669 Score = 133 bits (69), Expect = 1e-30 Identities = 69/69 (100%) Strand = Plus / Plus Query: 213 ccgcaagaatatgagagtcaagtttttgctactttgaaaaaagagagaaaatacagaata 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2784 ccgcaagaatatgagagtcaagtttttgctactttgaaaaaagagagaaaatacagaata 2843 Query: 273 ccaacagct 281 ||||||||| Sbjct: 2844 ccaacagct 2852 \# anon- EST:Posey25 = CG30185 >anon- EST:Posey25 ggaacgaggt atttgttaaa aaccaaagcg aagctgatgc cgaaaagggt gaattattgg caaccgtttc tatagtttta tctgaaacat gtatgaatgt tttatggctt aaaaactaag tttcactgtc acagttaaac caaaaacaca actaaaaaaa actgttttag gtgatgaaac tgcgacagca gacaatagaa acttaaaaac ctacacaact ttatgcttta agattaagtg ggacaaacat tcacttgcca ccggcagtga atctcgtgcc gaattcggca cgaggtttct tgcaatttcg cacgccaaat acaataactt taatttcgct gaccatgtgt gactttgcaa cagtgcaaaa gatagccaac tgcctgggcg ttaatcccgg caaggtgcag ctgaatgagg agcaggtcgt aacgcgcacg agtggccaaa agaagacgtg gccggattcg ccacgatcct ggagagcctg gccagcgagt ccaagtcgga gaccgcccag aacagcaggg cgtcgcggga ggtggaagcc caggtgtacc agtggatcga gttctccgtg ctctacgtgg cgcccaagga caagtacgtg tccaagcagc ttctggcgga cttcaacaaa ctgtttgcca gcaaatccta cctggtgggc cacttcatca ctctagccga cctggccgtc tactatgcca tctacgatct tgtgaaatcc ctttcgccgg tggacaagga ggtatatttg aatctctccc gctggttcga tcacctccag aatcgcgcgg atgtgcacca gggcgagcca ctgctgaact tcaccaccat ctacctgcac ggctgggcca caggcaccca catctaagcc ccgggcgggc acccttgcat ccattcacat ccagtcacga atgcgacact taagttattt atttctattg catttcacaa tgtagttttg tgtgttgtga ttatcattta atgccaatga gagagttcag cgttggaata tgaagaatcg ttattgtagc ccgcaaaaaa a Database: dmel_all_transcript_r320 >CG30185-RA type=mRNA; loc= 2R:join (18587609..18587747,18587816..18588121, 18588193..18588467); ID=CG30185-RA; name=CG30185-RA; db_xref='CG30185,FlyBase:FBgn0050185'; len=720 Length = 720 Genome Map Score = 1269 bits (660), Expect = 0.0 Identities = 698/712 (98%), Gaps = 7/712 (0%) Strand = Plus / Plus Query: 295 gtttcttgcaatttcgcacgccaaatacaataactttaatttcgctgaccatgtgtgact 354 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9 gtttcttgcaatttcgcacgccaaacacaataactttaatttcgctgaccatgtgtgacg 68 Query: 355 ttgcaacagtgcaaaagatagccaactgcctgggcgttaatcccggcaaggtgcagctga 414 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 69 ttgcaacagtgcagaagatagcaaactgcctgggcgttaatcccggcaaggtgcagctga 128 Query: 415 atgaggagcaggtcgtaacgcgcacgagtggccaaaagaaga-cgtggccggattcgcca 473 | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 129 acgaggagcaggtcgtaacgcgcacgagtgggcaaaagaagagcgtggccggattcgcct 188 Query: 474 cgatcctggagagcctggccagcgagtccaagtcggagaccgcccagaacagcagggcgt 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 cgatcctggagagcctggccagcgagtccaagtcggagaccgcccagaacagcagggcgt 248 Query: 534 cgcgggaggtggaagcccaggtgtaccagtggatcgagttctccgtgctctacgtggcgc 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 cgcgggaggtggaagcccaggtgtaccagtggatcgagttctccgtgctctacgtggcgc 308 Query: 594 cc------aaggacaagtacgtgtccaagcagcttctggcggacttcaacaaactgtttg 647 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 ccggctccaaggacaagtacgtgtccaagcagcttctggcggacttcaacaaactgtttg 368 Query: 648 ccagcaaatcctacctggtgggccacttcatcactctagccgacctggccgtctactatg 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ccagcaaatcctacctggtgggccacttcatcactctagccgacctggccgtctactatg 428 Query: 708 ccatctacgatcttgtgaaatccctttcgccggtggacaaggaggtatatttgaatctct 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccatctacgatcttgtgaaatccctttcgccggtggacaaggaggtatatttgaatctct 488 Query: 768 cccgctggttcgatcacctccagaatcgcgcggatgtgcaccagggcgagccactgctga 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 cccgctggttcgatcacctccagaatcgcgcggatgtgcaccagggcgagccactgctga 548 Query: 828 acttcaccaccatctacctgcacggctgggccacaggcacccacatctaagccccgggcg 887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 acttcaccaccatctacctgcacggctgggccacaggcacccacatctaagccccgggcg 608 Query: 888 ggcacccttgcatccattcacatccagtcacgaatgcgacacttaagttatttatttcta 947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 ggcacccttgcatccattcacatccagtcacgaatgcgacacttaagttatttatttcta 668 Query: 948 ttgcatttcacaatgtagttttgtgtgttgtgattatcatttaatgccaatg 999 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 ttgcatttcacaatgtagttttgtgtgttgtgattatcatttaatgccaatg 720 \# anon- EST:Posey251 = ? >anon- EST:Posey251 ggcacgaggt ttgaattaaa tacagtaaag taaatcgaaa aaaaaacaca cttaaacaaa atggagtcta tgtgtaaatg cattataatt agaattgcag taaaccatac aaacagaggc gaaacgaaat ttaaataaaa tttttaacat tccaatgatg ctatttcttt ggtgtgctgt tttaaacaac aaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003726 |gb|AE003726| arm:3R 15173357..15421232 estimated- cyto:92A2-92A10 gadfly- seqname:AE003726 seq_release:3 Length = 247876 Score = 321 bits (167), Expect = 3e-87 Genome Map Identities = 176/185 (95%) Strand = Plus / Plus Query: 9 gtttgaattaaatacagtaaagtaaatcgnnnnnnnnncacacttaaacaaaatggagtc 68 ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112508 gtttgaattaaatacagtaaagtaaatcgaaaaaaaaacacacttaaacaaaatggagtc 112567 Query: 69 tatgtgtaaatgcattataattagaattgcagtaaaccatacaaacagaggcgaaacgaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112568 tatgtgtaaatgcattataattagaattgcagtaaaccatacaaacagaggcgaaacgaa 112627 Query: 129 atttaaataaaatttttaacattccaatgatgctatttctttggtgtgctgttttaaaca 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112628 atttaaataaaatttttaacattccaatgatgctatttctttggtgtgctgttttaaaca 112687 Query: 189 acaaa 193 ||||| Sbjct: 112688 acaaa 112692 \# anon- EST:Posey259 =CG8177 >anon- EST:Posey259 ggcacgagct cgtgccgaat tcggcacgag gagcgtcaca caatgattgc atcacacgca aaagaaacca acgagcggaa caagttatta actcggttgg agactcgcat gtattattag caataattgc atttgcatat acacaaaact attataaatt tggcttagac ctatcaaatc gaagcaatcc cagcgtggaa aactaagagg aacccgtaaa ctatttaact tcaactggcg tagtgataat tagtgtcaaa cacacacaaa aacctcccct ttaagatcga acgaacaatt gtttataaca aaaaaatcgt tttaagcact tcaaccggag ctttctttta aagtaaatgc ttcgcgtttg aagtggccgc tgtaagtttg ccttctttgt acttgtagtc nggatattga aaaacaacca aa Database: dmel_all_transcript_r320 >CG8177-RE type=mRNA; loc= 3L:join (9731802..9732018,9736975..9737122, 9737181..9737436,9737652..9737781,9738065..9738226, 9738295..9738537,9738607..9738747,9739232..9739432, 9740138..9740332,9740403..9742156,9742226..9742420, 9742481..9742709,9742771..9743794); ID=CG8177-RE; name=CG8177-RE; db_xref='CG8177,FlyBase:FBgn0036043'; len=4895 Length = 4895 Genome Map Score = 740 bits (385), Expect = 0.0 Identities = 395/404 (97%) Strand = Plus / Plus Query: 29 aggagcgtcacacaatgattgcatcacacgcaaaagaaaccaacgagcggaacaagttat 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4470 aggagcgtcacacaatgattgcatcacacgcaaaagaaaccaacgagcggaacaagttat 4529 Query: 89 taactcggttggagactcgcatgtattattagcaataattgcatttgcatatacacaaaa 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4530 taactcggttggagactcgcatgtattattagcaataattgcatttgcatatacacaaaa 4589 Query: 149 ctattataaatttggcttagacctatcaaatcgaagcaatcccagcgtggaaaactaaga 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4590 ctattataaatttggcttagacctatcaaatcgaagcaatcccagcgtggaaaactaaga 4649 Query: 209 ggaacccgtaaactatttaacttcaactggcgtagtgataattagtgtcaaacacacaca 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4650 ggaacccgtaaactatttaacttcaactggcgtagtgataattagtgtcaaacacacaca 4709 Query: 269 aaaacctcccctttaagatcgaacgaacaattgtttataacnnnnnnntcgttttaagca 328 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4710 aaaacctcccctttaagatcgaacgaacaattgtttataacaaaaaaatcgttttaagca 4769 Query: 329 cttcaaccggagctttcttttaaagtaaatgcttcgcgtttgaagtggccgctgtaagtt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4770 cttcaaccggagctttcttttaaagtaaatgcttcgcgtttgaagtggccgctgtaagtt 4829 Query: 389 tgccttctttgtacttgtagtcnggatattgaaaaacaaccaaa 432 |||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 4830 tgccttctttgtacttgtagtcaggatattgaaaaacaacaaaa 4873 \# anon- EST:Posey262 = CG15209 >anon- EST:Posey262 ggcacgaggg atgacccatg cagatataca tactatggca actatatgat attctccgac ctgactttcg ttagaacatt ataaggagca ttgtagttcc agcagcaatt ctttcaaata atagtttgcc tcatttttag actcgtatag aaatgcaaat aaactaaacc gtattattgt aaaaa Database: dmel_all_transcript_r320 >CG15209-RA type=mRNA; loc= X:10584094..10584942 ; ID=CG15209-RA; Genome Map name=CG15209-RA; db_xref='CG15209,FlyBase:FBgn0030237'; len=849 Length = 849 Score = 323 bits (168), Expect = 3e-88 Identities = 172/174 (98%) Strand = Plus / Plus Query: 8 gggatgacccatgcagatatacatactatggcaactatatgatattctccgacctgactt 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 gggatgacccatgcagatatacatactatggcaactatatgatattctccgacctgactt 728 Query: 68 tcgttagaacattataaggagcattgtagttccagcagcaattctttcaaataatagttt 127 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 729 tctttagaacattataaggagcattgtaattccagcagcaattctttcaaataatagttt 788 Query: 128 gcctcatttttagactcgtatagaaatgcaaataaactaaaccgtattattgta 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gcctcatttttagactcgtatagaaatgcaaataaactaaaccgtattattgta 842 \# anon- EST:Posey263 = ? end of l(3)82Fd ? >anon- EST:Posey263 ggcacgaggt aagaccctcc ctaagcacgc attaaaccaa atccaaatca agttgaatcc ctgttgtatt gtgaaaacgg aagacattat tttgaggaat tttgagagca aaagctatga taaccggaaa tcgaaagatc atttagcttt gaaatcactt caactacacg ctaacttcat tcaaaaactt gagaccaaaa tacgtttact acaatatatg gcatatacat atggcactac agagtggcaa caactctacg gttggagcat gatatcatta aatattatcg atacgtatac cgcagaatag tttgttgaca accagtcaat tatgtcccaa acaaaactca ctcacgcgag ctaaaagctt aatggaatac atatgtattg tatatgaagt caagaagtgt ttatttccgt agactatgaa actatgttgt tgaattcgta gctattttgt tgtgcgttga gcagtaatgc agtgaatatg caagccatat gaagccgaaa ttaatgaaga taattttata ttgtaacttc tgtcaattaa attgtagact ggtgcatata ccaagcgaaa ctgcgtaaca tatgccgcat acatacatat gtatagctgt tgcagcaggc acttgtttaa gccatcaatg catggtttat tgatgacgaa ctatagttct gctcccccaa attttgttgt gcgttcaata agtgcttagt attggtgtaa tatataattc aggcagacat acaaacataa gtacccagat gtatatcaca gccagttaat cagttagtgt gcaattatcc cagcccatgc gagtactttt tgcactcagt gtccgcattt ccagtgcgct tgcccattac agtgttgagt agtttgctaa agtttctagt tgttgtgcac tgaaaataaa cacaatgtaa ttcgcacaat tcgcggcaga tattcggcca ggtatgcttc agatatgcat ataatataca catacatatg taccccttct tagagataga tttgcgattg ttaggtgctg aagacgacct ccgctttttc agttcgaccc tgtagaatgc tgattgtaga accgcgcgat tgtataaact ccacgtagaa gggagcaaca ctctatctat ccaggccaca acttaatgtc catgccacat gccacacatg tatgttaagt gggtgactgg cgagaggaa ggattttaca aaggatacag ataaatcgat cggagattga ggcagttgga tgtggatgca gcaggtggtt tatttttcta ccgacagatt gcaagcaatt gagaacatag ttgattacta gacgaacagc agccattacc taagtcgtgt gtatatatac gagaggcata tatctaccta aatgcataca tatatagtat atatatatat ttttggaaag cgaatctagt gtgtctcgat gatatcggct agctgtattc aggtcgcggc caagtactaa gcatatttgc aaggatagtg atcagattaa atgttaaaac taattcgaga gttaaaaagt tcaccttggt tttttggttt gaatggaatg cattcgttgt tttttggtta ttctaaacac ggattaattc ctgtgtgcaa cttgtatcgt acctataaaa ttgcattcca acaaaaacaa aaacccatga gcagaacgca agagtatata tataaatata tcctatatgt aaatgtagtc attacaaaaa tgaacaactt ttctgaaaaa taaaatgtat attcaaatat caaaaa Database: dmel_all_scaffolds_r310 gadfly| SEG:AE003603 |gb|AE003603| arm:3R 971101..1266389 estimated- cyto:82F1-83A3 gadfly- seqname:AE003603 seq_release:3 Length = 295289 Score = 2732 bits (1421), Expect = 0.0 Genome Map Identities = 1488/1539 (96%), Gaps = 3/1539 (0%) Strand = Plus / Minus Query: 247 gcaacaactctacggttggagcatgatatcattaaatattatcgatacgtataccgcaga 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126271 gcaacaactctacggttggagcatgatatcattaaatattatcgatacgtataccgcaga 126212 Query: 307 atagtttgttgacaaccagtcaattatgtcccaaacaaaactcactcacgcgagctaaaa 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126211 atagtttgttgacaaccagtcaattatgtcccaaacaaaactcactcacgcgagctaaaa 126152 Query: 367 gcttaatggaatacatatgtattgtatatgaagtcaagaagtgtttatttccgtagacta 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126151 gcttaatggaatacatatgtattgtatatgaagtcaagaagtgtttatttccgtagacta 126092 Query: 427 tgaaactatgttgttgaattcgtagctattttgttgtgcgttgagcagtaatgcagtgaa 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126091 tgaaactatgttgttgaattcgtagctattttgttgtgcgttgagcagtaatgcagtgaa 126032 Query: 487 tatgcaagccatatgaagccgaaattaatgaagataattttatattgtaacttctgtcaa 546 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126031 tatgcaagccatatgaagccgaaattaatggagataattttatattgtaacttctgtcaa 125972 Query: 547 ttaaattgtagactggtgcatataccaagcgaaactgcgtaacatatgccgcatacatac 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125971 ttaaattgtagactggtgcatataccaagcgaaactgcgtaacatatgccgcatacatac 125912 Query: 607 atatgtatagctgttgcagcaggcacttgtttaagccatcaatgcatggtttattgatga 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125911 atatgtatagctgttgcagcaggcacttgtttaagccatcaatgcatggtttattgatga 125852 Query: 667 cgaactatagttctgctcccccaaattttgttgtgcgttcaataagtgcttagtattggt 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125851 cgaactatagttctgctcccccaaattttgttgtgcgttcaataagtgcttagtattggt 125792 Query: 727 gtaatatataattcaggcagacatacaaacataagtacccagatgtatatcacagccagt 786 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125791 gtaatatataattcaggcagacatacaaacataagtacccagatgtatatcacagccagt 125732 Query: 787 taatcagttagtgtgcaattatcccagcccatgcgagtactttttgcactcagtgtccgc 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125731 taatcagttagtgtgcaattatcccagcccatgcgagtactttttgcactcagtgtccgc 125672 Query: 847 atttccagtgcgcttgcccattacagtgttgagtagtttgctaaagtttctagttgttgt 906 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 125671 atttccagtgcgcttgcccattacagtgttgagtagtttgccaaagtttctagttgttgt 125612 Query: 907 gcactgaaaataaacacaatgtaattcgcacaattcgcggcagatattcggccaggtatg 966 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125611 gcactgaaaataaacacaatgtaattcgcacaattcgcggcagatattcggccaggtatg 125552 Query: 967 cttcagatatgcatataatatacacatacatatgtaccccttcttagagatagatttgcg 1026 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125551 cttcagatatgcatataatatacacatacatatgtaccccttcttagagatagatttgcg 125492 Query: 1027 attgttaggtgctgaagacgacctccgctttttcagttcgaccctgtagaatgctgattg 1086 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125491 attgttaggtgctgaagacgacctccgctttttcagttcgaccctgtagaatgctgattg 125432 Query: 1087 tagaaccgcgcgattgtataaactccacgtagaagggagcaacactctatctatccaggc 1146 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 125431 tagaaccgcgcgattgtataaactccacgtagaagggagcaccactctatctatccaggc 125372 Query: 1147 cacaacttaatgtccatgccacatgccacacatgtatgttaagtgggtgactgg-cgaga 1205 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 125371 cacaacttaatgtccatgccacatgccacacatgtatgttaagtgggtgactggacgaga 125312 Query: 1206 ggaaggattttacaaaggatacagataaatcgatcggagattgaggcagttggatgtgga 1265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125311 ggaaggattttacaaaggatacagataaatcgatcggagattgaggcagttggatgtgga 125252 Query: 1266 tgcagcaggtggtttatttttctaccgacagattgcaagcaattgagaacatagttgatt 1325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125251 tgcagcaggtggtttatttttctaccgacagattgcaagcaattgagaacatagttgatt 125192 Query: 1326 actagacgaacagcagccattacctaagtcgtgtgtatatatacgagaggcatatatcta 1385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125191 actagacgaacagcagccattacctaagtcgtgtgtatatatacgagaggcatatatcta 125132 Query: 1386 cctaaatgcatacnnnnnnnnnnnnnnnnnnnnnttttggaaagcgaatctagtgtgtct 1445 ||||||||||||| |||||||||||||||||||||||||| Sbjct: 125131 cctaaatgcatacatatatagtatatatatatatttttggaaagcgaatctagtgtgtct 125072 Query: 1446 cgatgatatcggctagctgtattcaggtcgcggccaagtactaagcatatttgcaaggat 1505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125071 cgatgatatcggctagctgtattcaggtcgcggccaagtactaagcatatttgcaaggat 125012 Query: 1506 agtgatcagattaaatgttaaaactaattcgagagttaaaaagttcaccttggttttttg 1565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125011 agtgatcagattaaatgttaaaactaattcgagagttaaaaagttcaccttggttttttg 124952 Query: 1566 gtttgaatggaatgcattcgttgttttttggttattctaaacacggattaattcctgtgt 1625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124951 gtttgaatggaatgcattcgttgttttttggttattctaaacacggattaattcctgtgt 124892 Query: 1626 gcaacttgtatcgtacctataaaattgcattccaacaaaaacaaaaacccatgagcagaa 1685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124891 gcaacttgtatcgtacctataaaattgcattccaacaaaaacaaaaacccatgagcagaa 124832 Query: 1686 cgcaagagnnnnnnnnnnnnnnnnnnnnnnnngtaaatgt--agtcattacaaaaatgaa 1743 |||||||| |||||||| |||||||||||||||||| Sbjct: 124831 cgcaagagtatatatataaatatatcctatatgtaaatgtaaagtcattacaaaaatgaa 124772 Query: 1744 caacttttctgaaaaataaaatgtatattcaaatatcaa 1782 ||||||||||||||||||||||||||||||||||||||| Sbjct: 124771 caacttttctgaaaaataaaatgtatattcaaatatcaa 124733 \# anon- EST:Posey264 = not in genome, and a pretty odd seq >anon- EST:Posey264 ggcacgagag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaaaaa \# anon- EST:Posey268 = ? >anon- EST:Posey268 ggcacgagtc gaaacccact taatttattt gcatttggcg acattgacgg tagactattc agcgcgaaac tccaacatcc gttaggagtg actttcaatg ataccaataa caaactctat gttgctgata cctataatca taaaatcaaa attattgaca tcgattcaaa tgatatatct actctacaaa ttaagagcca agaaaatact aacctgattt taaacgagcc cgccggactg tgcttggatg ccagcggacg gaatttgttg gtagctgata ccaataacca ttcaatacat acaatagatt tggtaacgct tatagcacaa ccgtttggct tagatttcag acaaatagcg tccgctagtg aaattgatgc gccacaagat acacaaaagc ctacggaaaa taatatagtt aaagcattgc ctcttgattt aattaaacca agtaaaattt tttttaacct tcggctttcg cccagattta actttacaaa ggaagctcct caaaaatgga tagtgaaaac tgtatgtcaa tctgtaatag taaatccaac gtgcggaaat ctacttgatg ggatgtgcca catgcaggtg caggctacta ggcctgattt tatgtgtgaa agcagtcaaa tatttaccat cgaattcgta ttaaatttat gcctttcaaa ttgttgccta gtaaaaaaaa tcacggtttc tataaaacgc gatgacatac aagaagaata tatatccatc cacaacgtaa atattgacat tgaacaataa aaaatgtttt gatagaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:2R_wgs3_centromere_extension |gb|2R_wgs3_centromere_extension|a rm:2h 1296910,1651714 estimated-cyto:? gadfly- seqname:2R_wgs3_centromere_extension seq_release:3 Length = 354805 Score = 1435 bits (746), Expect = 0.0 Genome Map Identities = 762/778 (97%) Strand = Plus / Minus Query: 22 aatttatttgcatttggcgacattgacggtagactattcagcgcgaaactccaacatccg 81 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280727 aatttatttgcatttggcgacattgacggtagactattcagcgcgaaactccaacatccg 280668 Query: 82 ttaggagtgactttcaatgataccaataacaaactctatgttgctgatacctataatcat 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280667 ttaggagtgactttcaatgataccaataacaaactctatgttgctgatacctataatcat 280608 Query: 142 aaaatcaaaattattgacatcgattcaaatgatatatctactctacaaattaagagccaa 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280607 aaaatcaaaattattgacatcgattcaaatgatatatctactctacaaattaagagccaa 280548 Query: 202 gaaaatactaacctgattttaaacgagcccgccggactgtgcttggatgccagcggacgg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280547 gaaaatactaacctgattttaaacgagcccgccggactgtgcttggatgccagcggacgg 280488 Query: 262 aatttgttggtagctgataccaataaccattcaatacatacaatagatttggtaacgctt 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280487 aatttgttggtagctgataccaataaccattcaatacatacaatagatttggtaacgctt 280428 Query: 322 atagcacaaccgtttggcttagatttcagacaaatagcgtccgctagtgaaattgatgcg 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280427 atagcacaaccgtttggcttagatttcagacaaatagcgtccgctagtgaaattgatgcg 280368 Query: 382 ccacaagatacacaaaagcctacggaaaataatatagttaaagcattgcctcttgattta 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280367 ccacaagatacacaaaagcctacggaaaataatatagttaaagcattgcctcttgattta 280308 Query: 442 attaaaccaagtaaaannnnnnnnaaccttcggctttcgcccagatttaactttacaaag 501 |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 280307 attaaaccaagtaaaattttttttaaccttcggctttcgcccagatttaactttacaaag 280248 Query: 502 gaagctcctcaaaaatggatagtgaaaactgtatgtcaatctgtaatagtaaatccaacg 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280247 gaagctcctcaaaaatggatagtgaaaactgtatgtcaatctgtaatagtaaatccaacg 280188 Query: 562 tgcggaaatctacttgatgggatgtgccacatgcaggtgcaggctactaggcctgatttt 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280187 tgcggaaatctacttgatgggatgtgccacatgcaggtgcaggctactaggcctgatttt 280128 Query: 622 atgtgtgaaagcagtcaaatatttaccatcgaattcgtattaaatttatgcctttcaaat 681 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280127 atgtgtgaaagcagtcaaatatttaccatcgaattcgtattaaatttatgcctttcaaat 280068 Query: 682 tgttgcctagtnnnnnnnntcacggtttctataaaacgcgatgacatacaagaagaatat 741 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 280067 tgttgcctagtaaaaaaaatcacggtttctataaaacgcgatgacatacaagaagaatat 280008 Query: 742 atatccatccacaacgtaaatattgacattgaacaataaaaaatgttttgatagaaaa 799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280007 atatccatccacaacgtaaatattgacattgaacaataaaaaatgttttgatagaaaa 279950 Score = 33.4 bits (17), Expect = 9.0 Genome Map Identities = 21/23 (91%) Strand = Plus / Minus Query: 406 gaaaataatatagttaaagcatt 428 ||||||| ||| ||||||||||| Sbjct: 95737 gaaaatattattgttaaagcatt 95715 \# anon- EST:Posey277 = CG31451 >anon- EST:Posey277 ggcacgaggt cgagtgcgga tcccttgccc cagcggctat tcgcctgcgc actcggtcca tccctggctc actacacgaa gcgacggcgt ggcccagttg ggtgcgggaa tagccggatc tggccttaaa aaccggataa accattgagc gcgggacgca ctcggctgta ggtacgccgc ccaaacaagg tcacaccgag agacacacgt ccacgaacag accagagttc ttcccgcaat ccatcagaca cgcactgcca tggaaaggtc acggaaatcg catggcagtg ctcaccaaaa tccaaatcca agcccaatcc gtccctggtc ccgccccttg cgaatccgct tgcggaattg tgggggtggg gtgtggggcg gctgggtggg agtttgatca taacacaaac acgaaaccaa accaaacacc accacccttt gcgttcggca aatcacctcc ggctgcgatt aaggggctca gtgccagggg ttagtcggag cacactcgac cgatttccgt gacatacgtc tctagccaaa tccggcagag atcggagggc gcgcccgacg ccaccagtcg tgggctatgc aatggattga acgaaacatg cgccagagcc aatttttata tttgaccatt aagaaaaacc tatgattttg ctttactatt cgacccacta tcatcccaga ttgcgtagcc tccggcgtcc ttggcgacgc ggcgtcgtcg tccggaccat cctccggcac gccttccaaa attggcgttc actggatcga ttagccccca gcaaattgaa tcgcagcccg caggagattt ggttattatc gcctcatttc gtacaaagag aaaccgcaac aaggaaacac tgcacatcgt tttttacacc cttgcgttat gttttttgaa tgtatttaaa aacaaaaaca aaatgaaaaa ccaaaaccaa ataatgaaaa acaaaatatg aaaacacaca aaacactgaa aaaaaaaacc aaaaatagaa tgtaagttta aataatatgc tattcaaaga aatccaaaac atgattaccc ataaaacaaa aa Database: dmel_all_transcript_r320 >CG31451-RA type=mRNA; loc= 3R:19799725..19800949 ; ID=CG31451-RA; Genome Map name=CG31451-RA; db_xref='CG31451,FlyBase:FBgn0051451'; len=1225 Length = 1225 Score = 985 bits (512), Expect = 0.0 Identities = 522/527 (99%) Strand = Plus / Plus Query: 391 agtttgatcataacacaaacacgaaaccaaaccaaacaccaccaccctttgcgttcggca 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 agtttgatcataacacaaacacgaaaccaaaccaaacaccaccaccctttgcgttcggca 603 Query: 451 aatcacctccggctgcgattaaggggctcagtgccaggggttagtcggagcacactcgac 510 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 604 aatcacctccggctgcgattaaggggctcagtgccaggggttaatcggagcacactcgac 663 Query: 511 cgatttccgtgacatacgtctctagccaaatccggcagagatcggagggcgcgcccgacg 570 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 664 cgatttccgtgacatacgtctctagccaaatgcggcagagatcggagggcgcgcccgacg 723 Query: 571 ccaccagtcgtgggctatgcaatggattgaacgaaacatgcgccagagccaatttttata 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 ccaccagtcgtgggctatgcaatggattgaacgaaacatgcgccagagccaatttttata 783 Query: 631 tttgaccattaagaaaaacctatgattttgctttactattcgacccactatcatcccaga 690 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 784 tttgaccattaagaaaaacctatgattttgctttacgattcgacccactatcatcccaga 843 Query: 691 ttgcgtagcctccggcgtccttggcgacgcggcgtcgtcgtccggaccatcctccggcac 750 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 844 ttgcgtagcctccggcgtccttggcgacgcgacgtcgtcgtccggaccatcctccagcac 903 Query: 751 gccttccaaaattggcgttcactggatcgattagcccccagcaaattgaatcgcagcccg 810 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 gccttccaaaattggcgttcactggatcgattagcccccagcaaattgaatcgcagcccg 963 Query: 811 caggagatttggttattatcgcctcatttcgtacaaagagaaaccgcaacaaggaaacac 870 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 caggagatttggttattatcgcctcatttcgtacaaagagaaaccgcaacaaggaaacac 1023 Query: 871 tgcacatcgttttttacacccttgcgttatgttttttgaatgtattt 917 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 tgcacatcgttttttacacccttgcgttatgttttttgaatgtattt 1070 \# anon- EST:Posey280 = ? >anon- EST:Posey280 ggcacgaggg gaagtagcat atccattcta aacccacaac tcctcaatca cacacactat tgtaaacaat aacacacaca ataatgccta agtgcgaaat gtaatcaacg gtcgagagcc cttcgattaa gctcattgct catttacgca gagcaaagtg caaaagtccg aagtccaaaa tccagactct gtggcgagcc aacgtccacg tcccctaaac atccgatttt tacgacttta ttctcttaaa cttcgctctt aagctatccc aatctgccta tataaaccca aacatgtccc catatagtag ttcagttctg ggtacgttat caatcgcgat aaccctgctn agcccacttc aacttcgaag tccattatct acctagtgat aatccaaagg gcctagctct tcctttattg gaattaaaaa gaaaacgttt aataatacat aa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003788 |gb|AE003788| arm:2R 1..217015 estimated- cyto:41E3-41E5 gadfly- seqname:AE003788 seq_release:3 Length = 217015 Score = 285 bits (148), Expect = 8e-76 Genome Map Identities = 205/224 (91%), Gaps = 8/224 (3%) Strand = Plus / Plus Query: 235 actttattctcttaaacttcgctcttaagctatcccaatctgcctatataaacccaaaca 294 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179821 actttattatcttaaacttcgctcttaagctatcccaatctgcctatataaacccaaaca 179880 Query: 295 tgtccccata---tagt--agttcagttctgggtacgttatcaatcgcgataaccctgct 349 |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 179881 tgtccccatacactagttcagttcagttctgagtacgttatcaatcgcgataaccctgct 179940 Query: 350 nagcccacttcaacttcgaagtccattatcta-cctagtgataatccaaagggcctagct 408 |||||||||||| |||||||||| ||||| | ||||||||||||||||||| |||| | Sbjct: 179941 aagcccacttcaatttcgaagtccgttatccagcctagtgataatccaaaggctctagtt 180000 Query: 409 cttcctttattggaattaaaaagaaaacgtttaataatacataa 452 ||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 180001 cttcctttattggaattaata--aaaacgttaaataatacataa 180042 Score = 117 bits (61), Expect = 2e-25 Genome Map Identities = 71/76 (93%) Strand = Plus / Plus Query: 152 agcaaagtgcaaaagtccgaagtccaaaatccagactctgtggcgagccaacgtccacgt 211 |||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| Sbjct: 179605 agcaaagtgcaaaagtccgaagtccaaagtgtagactctgtggcgacccaacgtccacgt 179664 Query: 212 cccctaaacatccgat 227 |||||||| ||||||| Sbjct: 179665 cccctaaaaatccgat 179680 \# anon- EST:Posey285 = CG6869 >anon- EST:Posey285 ggcacgaggt gccgaccatt gtaacatata caataccaga tgcataagag aacgtagaaa cctagtctag ttatatatgg atatacaagt gctatgtata catagttcgg taatttatat agttgtttaa actaaaagca agtccaaaat agaccgtaat gagtaaatga aaggcaagtt aaagtagttc aacwttaaaa ggcttaactc aaatgagagg aggcatccag ctatatagat tagatctttt gtaagtgttt ttgtaagcaa ccagcaaaca acacaatggc ttgacctgaa ataagttgcc tgttattaga ggcgcacttt cttttccagg tttattttct gttttaggct ctatctagac cggcttttag ttgaaatatt agctgttgag agctacttgt aaaggtttcc cagcctgttg actaactact aactttataa ccgattcgca caagccaaca tatgtatwtc taatataaat acaaatacaa tctgcattcc tatttttcat gaaatatcat atggcgtatt attttagttc gaacagcgca atgtgtgtgt tttttacaat ttttatcaat atttgtattt attgtataac attttattta taagtattga ataatatcat a Database: dmel_all_transcript_r320 >CG6869-RA type=mRNA; loc= 3L:join (15096019..15096281,15099691..15099880, 15100347..15101063,15101249..15101432, 15101499..15103276); ID=FucTA-RA; name=FucTA-RA; db_xref='CG6869,FlyBase:FBgn0036485'; len=3132 Length = 3132 Genome Map Score = 1092 bits (567), Expect = 0.0 Identities = 617/634 (97%), Gaps = 6/634 (0%) Strand = Plus / Plus Query: 9 gtgccgaccattgtaacatatacaataccagatgcataagagaacgtagaaacctagtct 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2405 gtgccgaccattgtaacatatacaataccagatgcataagagaacgtagaaacctagtct 2464 Query: 69 agttatatatggatatacaagtgctatgtatacatagttcggtaatttatatagttgttt 128 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2465 agatatatatggatatacaagtgctatgtatacatagttcggtaatttatatagttgttt 2524 Query: 129 aaactaaaagcaagtccaaaatagaccgtaatgagtaaatgaaaggcaagttaaagtagt 188 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2525 aaactaaaagcaagtccaaaatagaccgtaatgattaaatgacaggcaagttaaagtagt 2584 Query: 189 tcaacwttaaaaggcttaactcaaatgagaggaggcatccagctatatagattagatctt 248 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2585 tcaacattaaaaggcttaactcaaatgagaggaggcatc-agctatatagattagatctt 2643 Query: 249 ttgtaagtgtttttgtaagcaaccagcaaacaacacaatggcttgacctgaaataagttg 308 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2644 ttgtaagtgtttttgtaagcaaccagcaaaca---caatggctcgacctgaaataagttg 2700 Query: 309 cctgttattagaggcgcactttcttttccaggttta-ttttctgttttaggctctatcta 367 ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 2701 cctgttattagag-cgcactttcttttccaggtttaattttctgtattaggctctatcta 2759 Query: 368 gaccggcttttagttgaaatattagctgttgagagctacttgtaaaggtttcccagcctg 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2760 gaccggcttttagttgaaatattagctgttgagagctacttgtaaaggtttcccagcctg 2819 Query: 428 ttgactaactactaactttataaccgattcgcacaagccaacatatgtatwtctaatata 487 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 2820 ttgactaactactaactttataaccgattcgcacaagcctacatatgtatatctgatata 2879 Query: 488 aatacaaatacaatctgcattcctatttttcatgaaatatcatatggcgtattattttag 547 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2880 aatacaaatacaatctgcattcctatttttcatgaaatatcatatggcgtattatcttag 2939 Query: 548 ttcgaacagcgcaatgtgtgtgttttttacaatttttatcaatatttgtatttattgtat 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2940 ttcgaacagcgcaatgtgtgtgttttttacaatttttatcaatatttgtatttattgtgt 2999 Query: 608 aacattttatttataagtattgaataatatcata 641 |||||||||||||||||||||||||||||||||| Sbjct: 3000 aacattttatttataagtattgaataatatcata 3033 \# anon- EST:Posey288 = CG13993 >anon- EST:Posey288 ggtgttgcaa ttttcagtga attcgcagca gagccaagca atttgcattc aatcatctgt gaaggaaaag ctatcacaca aaatggcaca aatggacatc gaattgaaga aggccttcac cgagatgcag atcantgagc tggagacgac caagaagatc cacatgatcg acatgaagtg cgacgtggtc aagacaggca aacaaaagta ccagctgaca gaaaagggca cctgctgctt ggccgacgac acaagaattt accagtccgt gggtcgcatg ttcctgctta ccgatttaca gaatatgcgc gaggacctga aggctaggcn ggaaaaatgc gacaaagcga tngaactgct ggagaagaag aaggantctt gcagaagtcc ttaaaaacca ggaagacgtc tgcgctagtt ggtgcaccnc cgcagggaac ccatcagacn gcgaaataga ctaccctccg aactggcttt ntccctca Database: dmel_all_transcript_r320 >CG13993-RA type=mRNA; loc= 2L:join (6061318..6061465,6061562..6061704, 6061774..6062055); ID=CG13993-RA; name=CG13993-RA; db_xref='CG13993,FlyBase:FBgn0031776'; len=573 Length = 573 Genome Map Score = 733 bits (381), Expect = 0.0 Identities = 464/494 (93%), Gaps = 6/494 (1%) Strand = Plus / Plus Query: 1 ggtgttgcaattttcagtgaattcgcagcagagccaagcaatttgcattcaatcatctgt 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 37 ggtgttgcaattttcagtgaattcgcagcaaagccaagcaatttgcattcaatcatctgt 96 Query: 61 gaaggaaaagctatcacacaaaatggcacaaatggacatcgaattgaagaaggccttcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 gaaggaaaagctatcacacaaaatggcacaaatggacatcgaattgaagaaggccttcac 156 Query: 121 cgagatgcagatcantgagctggagacgaccaagaagatccacatgatcgacatgaagtg 180 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 cgagatgcagatcaataagctggagacgaccaagaagatccacatgatcgacatgaagtg 216 Query: 181 cgacgtggtcaagacaggcaaacaaaagtaccagctgacagaaaagggcacctgctgctt 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 217 cgacatggtcaagacaggcaaacaaaagtaccagctgacagaaaagggcaccagcagctt 276 Query: 241 ggccgacgacacaagaatttaccagtccgtgggtcgcatgttcctgcttaccgatttaca 300 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 277 ggccgacgacacaagagtttaccagtccgtgggtcgcatgttcctgcttaccgatgtaca 336 Query: 301 gaatatgcgcgaggacctgaaggctaggcnggaaaaatgcgacaaagcgatngaactgct 360 ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| Sbjct: 337 gaatatgcgcgaggacctgaaggctaggcaggagaaatgcgacaaagcgatagaactgct 396 Query: 361 ggagaagaagaagga-ntcttgcagaagt-ccttaaaaaccaggaagac-gtctgcgcta 417 ||||||||||||||| |||||||||||| |||||| | |||||||||| |||||||| | Sbjct: 397 ggagaagaagaaggagttcttgcagaagtcccttaagagccaggaagacggtctgcgcga 456 Query: 418 gttggtgcaccnccgcagggaa-cccatcagacngcgaaatagactac-cctccgaactg 475 ||||||||| | |||| |||| || ||||||| |||||||||||||| |||| ||||| Sbjct: 457 gttggtgcagcagcgcaaggaagccgatcagactgcgaaatagactacaactccaaactg 516 Query: 476 gc-tttntccctca 488 || ||| ||||||| Sbjct: 517 gcatttatccctca 530 \# anon- EST:Posey289 = end of lace ? >anon- EST:Posey289 ggcacgagat tcactgtacg ggattcttaa gtctactagt gtaaatattt atttaaaata tataaaactt ggcgggcaga tgaatcttaa agtcgaaaaa tgttttgcct tgtattttac ataaattttg acacaactta tgcgacctct acagttaatt tacagaagtt ggatactcga cgcaaatata aaacacatat gtagagaatc cgctaagtct agggccttag ttcttatttt tgagaaaata agaagtacag tggccattaa ttaaataaag ctacttcttg aaccattttt aattaagtaa atgcctgact tttaagcgat aattagagat tagcgatatc aattaaatcg atattgataa tatgttattt tagacgattt ggaagtaaaa taaataaaat ttgtttcagt aaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003647 |gb|AE003647| arm:2L 15243654..15505601 estimated- cyto:35C5-35D3 gadfly- seqname:AE003647 seq_release:3 Length = 261948 Score = 794 bits (413), Expect = 0.0 Genome Map Identities = 413/413 (100%) Strand = Plus / Plus Query: 9 attcactgtacgggattcttaagtctactagtgtaaatatttatttaaaatatataaaac 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239034 attcactgtacgggattcttaagtctactagtgtaaatatttatttaaaatatataaaac 239093 Query: 69 ttggcgggcagatgaatcttaaagtcgaaaaatgttttgccttgtattttacataaattt 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239094 ttggcgggcagatgaatcttaaagtcgaaaaatgttttgccttgtattttacataaattt 239153 Query: 129 tgacacaacttatgcgacctctacagttaatttacagaagttggatactcgacgcaaata 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239154 tgacacaacttatgcgacctctacagttaatttacagaagttggatactcgacgcaaata 239213 Query: 189 taaaacacatatgtagagaatccgctaagtctagggccttagttcttatttttgagaaaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239214 taaaacacatatgtagagaatccgctaagtctagggccttagttcttatttttgagaaaa 239273 Query: 249 taagaagtacagtggccattaattaaataaagctacttcttgaaccatttttaattaagt 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239274 taagaagtacagtggccattaattaaataaagctacttcttgaaccatttttaattaagt 239333 Query: 309 aaatgcctgacttttaagcgataattagagattagcgatatcaattaaatcgatattgat 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239334 aaatgcctgacttttaagcgataattagagattagcgatatcaattaaatcgatattgat 239393 Query: 369 aatatgttattttagacgatttggaagtaaaataaataaaatttgtttcagta 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239394 aatatgttattttagacgatttggaagtaaaataaataaaatttgtttcagta 239446 Score = 33.4 bits (17), Expect = 4.7 Genome Map Identities = 17/17 (100%) Strand = Plus / Minus Query: 50 tatttaaaatatataaa 66 ||||||||||||||||| Sbjct: 138660 tatttaaaatatataaa 138644 Score = 33.4 bits (17), Expect = 4.7 Genome Map Identities = 21/23 (91%) Strand = Plus / Plus Query: 186 atataaaacacatatgtagagaa 208 ||||| | ||||||||||||||| Sbjct: 87488 atatataccacatatgtagagaa 87510 \# anon- EST:Posey292 = CG32172 >anon- EST:Posey292 ggcacgaggg gcacatcccg tctcatcccc actctctcga attgtgtccg ttggtagccg aagttacgat tgcaaaactt tcgtcatctc tctctcactc tctgaagcaa aagccaaggc cggagcaggt gcatatggtg ccaacccccc tggccccccc aaaagggggg tggtgctggt gcaattgcaa aggcacagga gcacaggagc agctaaataa acaagaaagc aaaatcaaca accgcaaaag tctaagacat gtatcacgaa ttgaaaatga taatgacaaa aa Database: dmel_all_transcript_r320 >CG32172-RA type=mRNA; loc= 3L:complement (17348426..17350337); Genome Map ID=noe-RA; name=noe-RA; db_xref='CG32172,FlyBase:FBgn0026197'; len=1912 Length = 1912 Score = 417 bits (217), Expect = e-116 Identities = 250/283 (88%) Strand = Plus / Plus Query: 9 gggcacatcccgtctcatccccactctctcgaattgtgtccgttggtagccgaagttacg 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 gggcacatcccgtctcatccccactctctcgaattgtgtccgttggtagccgaagttacg 202 Query: 69 attgcaaaactttcgtcannnnnnnnnnnnnnnnngaagcaaaagccaaggccggagcag 128 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 203 attgcaaaactttcgtcatctctctctcactctctgaagcaaaagccaaggccggagcag 262 Query: 129 gtgcatatggtgccaannnnnnnnnnnnnnnnaaaaggggggtggtgctggtgcaattgc 188 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 263 gtgcatatggtgccaacccccctggcccccccaaaaggggggtggtgctggtgcaattgc 322 Query: 189 aaaggcacaggagcacaggagcagctaaataaacaagaaagcaaaatcaacaaccgcaaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 aaaggcacaggagcacaggagcagctaaataaacaagaaagcaaaatcaacaaccgcaaa 382 Query: 249 agtctaagacatgtatcacgaattgaaaatgataatgacaaaa 291 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 agtctaagacatgtatcacgaattgaaaatgataatgacaaaa 425 \# anon- EST:Posey294 = CG2848 >anon- EST:Posey294 ggcacgagtg aacctgatcc aggcctccgt ctttcagctg cactccaaca tgctggtgga tgtggccnac gtgctccacg aactgaaggc aggtggtggg caacgagcgg atgcagccct tcctggccca ggcgctggaa gcactgccca aaaagaacag cggtggctac ggtgacaccc acgcagcgac agtctggact aatttagcag cacanttctg agagcggaca ccacgaaagc catttcgcaa gccttgaaaa ccttcacgcg actctttcgc ttatcagggg agatgccatg agtttggatt cggatgattc tggtgccttt tggaatgatg tatgtcatgt gg Database: dmel_all_transcript_r320 >CG2848-SR-RA type=mRNA; loc= 2L:join (2752484..2752715,2752786..2753877, 2754073..2754239,2754293..2755657,2755720..2756179); ID=Trn-SR-RA; name=Trn-SR-RA; db_xref='CG2848,FlyBase:FBgn0031456'; len=3316 Length = 3316 Genome Map Score = 477 bits (248), Expect = e-134 Identities = 323/344 (93%), Gaps = 7/344 (2%) Strand = Plus / Plus Query: 9 tgaacctgatccaggcctccgtctttcagctgcactccaacatgctggtggatgtggccn 68 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2646 tgaacctgatccaggcatccgtctttcagctgcactcctacatgctggtggatgtggccg 2705 Query: 69 acgtgctccacgaactgaaggcaggtggtgggcaacgagcggatgcagcccttcctggcc 128 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2706 aggtgctccacgaactgaag-caggtggtgggcaacgagcggatgcagcccttcctggcc 2764 Query: 129 caggcgctggaagcactgcccaaaaagaacagcggtggctacggtgacacccacgcagcg 188 ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 2765 caggcgctggaggcactgcccaaaaagaacagcggtggctacg-tgacagccacgcagca 2823 Query: 189 acagtctggactaatttagcagcacanttctgagagcggacaccacgaaagccatttcgc 248 |||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2824 acag-ctggacgaatttagcagcacagttctgagagcggacacaacgaaagccatttcgc 2882 Query: 249 aagccttgaaaaccttcacgcgactctttcgcttatcaggggagatgccatgagtttgga 308 ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| Sbjct: 2883 aagccttgaaaaccttcacgcgactctttcgctaatca-gggagatg-catgagtttgga 2940 Query: 309 ttcggatgattctggtgccttttggaatgatgtatgtcatgtgg 352 ||||||||||||| || | |||| ||||||||||||| |||||| Sbjct: 2941 ttcggatgattct-gtacatttt-gaatgatgtatgtaatgtgg 2982 \# anon- EST:Posey35 = CG32172 >anon- EST:Posey35 cgcccgttcg tgtaatcgct ggcgcgccac gccccccgcc cctcccactg tcacgcgctc gccacgcccc ccagttgccg ccccattagc agcgggcaga tggacaacgt gtgggtggcc cacaaggaca tctagtaaca cgacgcccaa cagcagccgc aaggtctgat acgccgcccg ccacgcccat cgtgtttggg cggcagagga agcggtccgg aagcggaaac ggaaacgggc gagcaaaatg gtggcgcggt atcgcgggca aggcgacggc gcgtccacaa aaaataacca tagagacgtt taaggcaaat tctaaatgaa caaaagtata aaccaaaaac aattgtaacg agaaaacaaa cgaattcaaa aatgagcaat atgagcaaca actaataatg gcaaaaagca aaaacgacaa ctgcaaatta cgacacaaca ccttcgaaaa gacctcagta ataataaaaa Database: dmel_all_transcript_r320 >CG32172-RA type=mRNA; loc= 3L:complement (17348426..17350337); Genome Map ID=noe-RA; name=noe-RA; db_xref='CG32172,FlyBase:FBgn0026197'; len=1912 Length = 1912 Score = 583 bits (303), Expect = e-166 Identities = 320/326 (98%), Gaps = 6/326 (1%) Strand = Plus / Plus Query: 3 cccgttcgtgtaatcgctggcgcgccacgccccccgcccctcccactgtcacgcgctcgc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 cccgttcgtgtaatcgctggcgcgccacgccccccgcccctcccactgtcacgcgctcgc 693 Query: 63 cacgccccccagttgccgccccattagcagcgggcagatggacaacgtgtgggtggccca 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 cacgccccccagttgccgccccattagcagcgggcagatggacaacgtgtgggtggccca 753 Query: 123 caaggacatctagtaacacgacgcccaacagcagccgcaaggtctgatacgccgcccgcc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 caaggacatctagtaacacgacgcccaacagcagccgcaaggtctgatacgccgcccgcc 813 Query: 183 acgcccatcgtgtttgggcggcagaggaagcggtccggaag------cggaaacggaaac 236 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 814 acgcccatcgtgtttgggcggcagaggaagcggtccggaagcggaaacggaaacggaaac 873 Query: 237 gggcgagcaaaatggtggcgcggtatcgcgggcaaggcgacggcgcgtccacaaaaaata 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 gggcgagcaaaatggtggcgcggtatcgcgggcaaggcgacggcgcgtccacaaaaaata 933 Query: 297 accatagagacgtttaaggcaaattc 322 |||||||||||||||||||||||||| Sbjct: 934 accatagagacgtttaaggcaaattc 959 Score = 187 bits (97), Expect = 9e-47 Identities = 97/97 (100%) Strand = Plus / Plus Query: 384 gagcaatatgagcaacaactaataatggcaaaaagcaaaaacgacaactgcaaattacga 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gagcaatatgagcaacaactaataatggcaaaaagcaaaaacgacaactgcaaattacga 1080 Query: 444 cacaacaccttcgaaaagacctcagtaataataaaaa 480 ||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cacaacaccttcgaaaagacctcagtaataataaaaa 1117 \# anon- EST:Posey37 = CG9282 >anon- EST:Posey37 gagacgaatt cggcacgagg caagatgaaa attggcttgt gcgcattcag cgggtacaaa atctaccccg gtcatggcaa gaccatggtc aagatcgatg gcaattcgtt caccttcctg gacaaaaagt gcgagcgctc ctacctgatg aagcgcaatc cccgcaaggt tacttggacc gtgctgtacc gccggaagca ccgcaaggga atcgaggagg agcctccang gaagcgcacc cgccgcaccc agaatttcca gcgcgccatc gtcggtgcct cgctggccga nattctggcc aagcgtaaca tgaacccgag gtgcgcaagg cgcagcgcga ccaggccatc aaggtggcca aggaacaaaa gcgtgccgtc aaggccgcca aaaagctgct gcccccgctc ccgctaaaaa tcggccccaa ncagaagccg ccaaggtcac Database: dmel_all_transcript_r320 >CG9282-RA type=mRNA; loc= 2L:complement (13382989..13383669,13383735..13383810, 13383926..13383985); ID=CG9282-RA; name=CG9282-RA; db_xref='CG9282,FlyBase:FBgn0032518'; len=817 Length = 817 Genome Map Score = 675 bits (351), Expect = 0.0 Identities = 415/436 (95%), Gaps = 5/436 (1%) Strand = Plus / Plus Query: 20 gcaagatgaaaattggcttgtgcgcattcagcgggtacaaaatctaccccggtcatggca 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 gcaagatgaaaattggcttgtgcgcattcagcgggtacaaaatctaccccggtcatggca 110 Query: 80 agaccatggtcaagatcgatggcaattcgttcaccttcctggacaaaaagtgcgagcgct 139 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 111 agaccatggtcaagatcgatggcaagtcgttcaccttcctggacaagaagtgcgagcgct 170 Query: 140 cctacctgatgaagcgcaatccccgcaaggttacttggaccgtgctgtaccgccggaagc 199 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 171 cctacctgatgaagcgcaatccccgcaaggttacgtggaccgtgctgtaccgccggaagc 230 Query: 200 accgcaagggaatcgaggaggagcctccanggaagcgcacccgccgcacccagaatttcc 259 ||||||||||||||||||||||| | | |||||||||||||||||||||||| |||| Sbjct: 231 accgcaagggaatcgaggaggaggcctccaagaagcgcacccgccgcacccagaagttcc 290 Query: 260 agcgcgccatcgtcggtgcctcgctggccganattctggccaagcgtaacatgaa-cccg 318 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 291 agcgcgccatcgtcggtgcctcgctggccgagattctggccaagcgtaacatgaagcccg 350 Query: 319 aggtgcgcaaggcgcagcgcgaccaggccatcaaggtggccaaggaacaaaagcgtgccg 378 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 351 aggtgcgcaaggcgcagcgcgaccaggccatcaaggtggccaaggagcagaagcgtgccg 410 Query: 379 tcaaggccgccaa-aaagctgctgcccccgctcccgctaa-aaatcggc-cccaancaga 435 ||||||||||||| || ||||||||||||||||||||||| || ||||| ||||| |||| Sbjct: 411 tcaaggccgccaagaaggctgctgcccccgctcccgctaagaagtcggcgcccaagcaga 470 Query: 436 a-gccgccaaggtcac 450 | |||||||||||||| Sbjct: 471 aggccgccaaggtcac 486 \# anon- EST:Posey5 = CG1263 >anon- EST:Posey5 ggcacgaggt accggtagga tccgtggtgg caagggcgac agcaaggaca agtaagctct ggctgcagca ggattccggc gtagcgcagg ttccgcctga gatctgggta gtggtcgtgc tctgctgtgc ggcgtcgtgg aagaaattgc tattctacat ggataatctg tatattctag gcatacgctt gacacggcaa aataaaacnt atttgtaaaa Database: dmel_all_transcript_r320 >CG1263-RB type=mRNA; loc= 3L:join (2568108..2568142,2568205..2568519, 2568713..2569626); ID=RpL8-RB; name=RpL8-RB; db_xref='CG1263,FlyBase:FBgn0024939'; len=1264 Length = 1264 Genome Map Score = 387 bits (201), Expect = e-107 Identities = 208/212 (98%) Strand = Plus / Plus Query: 9 gtaccggtaggatccgtggtggcaagggcgacagcaaggacaagtaagctctggctgcag 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 gtaccggtaggatccgtggtggcaagggcgacagcaaggacaagtaagctctggctgcag 996 Query: 69 caggattccggcgtagcgcaggttccgcctgagatctgggtagtggtcgtgctctgctgt 128 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 caggattccggcgtggcgcaggttccgcctgagatctgggtagtggtcgtgctctgctgt 1056 Query: 129 gcggcgtcgtggaagaaattgctattctacatggataatctgtatattctaggcatacgc 188 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1057 gcggcgtcgtggaagaaattgctattctacatggataatctgtatgttctaggcatacgc 1116 Query: 189 ttgacacggcaaaataaaacntatttgtaaaa 220 ||||||||||| |||||||| ||||||||||| Sbjct: 1117 ttgacacggcagaataaaacgtatttgtaaaa 1148 \# anon- EST:Posey52 = CG31158? >anon- EST:Posey52 cacacgagca ttcatagata ctatatatag ttcatatata tatttatata tatgtgtata tgcatagtat aacggctttc ctaagtttaa tcaaagctta tcagttagta ataaatgttc acataaaaat caccgtctcc acgttcgtct tcttgtttcc cttctcgcca caagttggca agttgtctta aatgaattgt tatcgaaagg gtattgcttt agaaactaag tgatgccctc ttaagccagt taaaatgttt gactaaataa atatacaata tgcatacatt taggcgcttg gtttgcagca ggcaagttgc tttcactttt agttagtttg tattttcgaa tttattgccg tttcagtaga attgttaaaa attattataa acaatgttat atagtctgca tttacataat tacacaatac cataatcata atatattcaa aaatatatga tgcatttaat tttatttttt cctccatctc tctttacccc gtaatggata tttaatttca tattctagct acatggacat gtcgcgtaat caaccgatag ttgtttaaat aaatatatta atccgtacat aatattggag taactgttcc tacacagtta aatgtgataa tgtatcgcaa aagaccaaaa acaagttgta cacggtatgg tagtaattgc ttaagcttaa tgctaatgcg cttgtcctct tctcaattct catttcgtta ttgttactgc cgatgttctc catcttgtgg ttgtgtagag atattgttca ttaattaata atttatttty atcatttata atgatagcat aggtratgat gtaagtattg tttatcaact ctkgtaataa taagtctatg tgtataagca gttttcattc tcgttcctaa acagccgtcc agcagaatct ttggcggagc aaatatgaac gataattcaa attcgaatcg atctgactgt gtagctttaa atcaggtgaa accgatctcg aataccctca ttnctggata agtagcatgg taaatataaa atcaactgca cgaattcgag ataatcctct ggttgccgag atctcgtncc gaattcgtct c Database: dmel_all_transcript_r320 >CG31158-RB type=mRNA; loc= 3R:join (18415336..18415350,18415597..18415663, 18415740..18415793,18416052..18416854,18416923..18418044, 18419223..18420301,18420368..18420754,18420808..18420971, 18421030..18421127,18421194..18421469,18421533..18421670, 18421731..18421948,18423575..18423686, 18423770..18424849); ID=CG31158-RB; name=CG31158-RB; db_xref='CG31158,FlyBase:FBgn0051158'; len=5613 Length = 5613 Genome Map Score = 1419 bits (737), Expect = 0.0 Identities = 744/748 (99%), Gaps = 1/748 (0%) Strand = Plus / Minus Query: 335 agtttgtattttcgaatttattgccgtttcagtagaattgttaaaaattattataaacaa 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5613 agtttgtattttcgaatttattgccgtttcagtagaattgttaaaaattattataaacaa 5554 Query: 395 tgttatatagtctgcatttacataattacacaataccataatcataatatattcaaaaat 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5553 tgttatatagtctgcatttacataattacacaataccataatcataatatattcaaaaat 5494 Query: 455 atatgatgcatttaattttattttttcctccatctctctttaccccgtaatggatattta 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5493 atatgatgcatttaattttattttttcctccatctctctttaccccgtaatggatattta 5434 Query: 515 atttcatattctagctacatggacatgtcgcgtaatcaaccgatagttgtttaaataaat 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5433 atttcatattctagctacatggacatgtcgcgtaatcaaccgatagttgtttaaataaat 5374 Query: 575 atattaatccgtacataatattggagtaactgttcctacacagttaaatgtgataatgta 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5373 atattaatccgtacataatattggagtaactgttcctacacagttaaatgtgataatgta 5314 Query: 635 tcgcaaaagaccaaaaacaagttgtacacggtatggtagtaattgcttaagcttaatgct 694 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5313 tcgcaaaagaccaaaaacaagttgtacacggtatggtagtaattgcttaagcttaatgct 5254 Query: 695 aatgcgcttgtcctcttctcaattctcatttcgttattgttactgccgatgttctccatc 754 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5253 aatgcgcttgtcctcttctcaattctcatttcgttattgttactgccgatgttctccatc 5194 Query: 755 ttgtggttgtgtagagatattgttcattaattaataatttattttyatcatttataatga 814 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5193 ttgtggttgtgtagagatattgttcattaattaataatttatttttatcatttataatga 5134 Query: 815 tagcataggtratgatgtaagtattgtttatcaactctkgtaataataagtctatgtgta 874 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5133 tagcataggtaatgatgtaagtattgtttatcaactcttgtaataataagtctatgtgta 5074 Query: 875 taagcagttttcattctcgttcctaaacagccgtccagcagaatctttggcggagcaaat 934 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5073 taagcagttttcattctcgttcctaaacagccgtccagcagaatctttggcggagcaaat 5014 Query: 935 atgaacgataattcaaattcgaatcgatctgactgtgtagctttaaatcaggtgaaaccg 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5013 atgaacgataattcaaattcgaatcgatctgactgtgtagctttaaatcaggtgaaaccg 4954 Query: 995 atctcgaataccctcattnctggataagtagcatggtaaatataaaatcaactgcacgaa 1054 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4953 atctcgaataccctcatt-ctggataagtagcatggtaaatataaaatcaactgcacgaa 4895 Query: 1055 ttcgagataatcctctggttgccgagat 1082 |||||||||||||||||||||||||||| Sbjct: 4894 ttcgagataatcctctggttgccgagat 4867 \# anon- EST:Posey55 = CG11739 >anon- EST:Posey55 ggcacgagtc gaaatactcc tgatattagc ctgaccgcat atgcttaccg ttcacagcaa gcgacacgtc agtgaatcaa atttacagtg tatattatag tgattgtgta aaagtgaaaa tgtatgaaac aaaaatatat ctgttaactg ttatctgaac tcagtttc Database: dmel_all_transcript_r320 >CG11739-RD type=mRNA; loc= 3R:join (204643..204730,205171..205339,205396..205545, 205649..205766,205830..205991,206225..206352, 206424..206931); ID=CG11739-RD; name=CG11739-RD; db_xref='CG11739,FlyBase:FBgn0037239'; len=1323 Length = 1323 Genome Map Score = 308 bits (160), Expect = 1e-83 Identities = 160/160 (100%) Strand = Plus / Plus Query: 9 tcgaaatactcctgatattagcctgaccgcatatgcttaccgttcacagcaagcgacacg 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1164 tcgaaatactcctgatattagcctgaccgcatatgcttaccgttcacagcaagcgacacg 1223 Query: 69 tcagtgaatcaaatttacagtgtatattatagtgattgtgtaaaagtgaaaatgtatgaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1224 tcagtgaatcaaatttacagtgtatattatagtgattgtgtaaaagtgaaaatgtatgaa 1283 Query: 129 acaaaaatatatctgttaactgttatctgaactcagtttc 168 |||||||||||||||||||||||||||||||||||||||| Sbjct: 1284 acaaaaatatatctgttaactgttatctgaactcagtttc 1323 \# anon- EST:Posey59 = CG8472 >anon- EST:Posey59 acgagatcgt ttcgagcaac aagaacaaca agtctatcac tacacttaaa caaaatgagg agcgtgaaga agacgagcaa gcagagggag aagcaagaag cagcagcagc ntccaccatt attgccgaaa gatggcgccc atggcgcact aaggtcagcg cgccacctgg cgacggcggc tcgcaccggc tgcattttgt ttgacagttt tccactaagg aagtaaagaa aaaaaattat gaaaaccccc cactctgtaa gctagcaaat tgtgtttaaa gtataatnaa aaaattgtcg atttcgttgc gagaaagaat aaaantaaaa gct Database: dmel_all_transcript_r320 >CG8472-RB type=mRNA; loc= 2R:join (7329273..7329388,7329456..7329630, 7333906..7334148,7338479..7339338); ID=Cam-RB; name=Cam-RB; db_xref='CG8472,FlyBase:FBgn0000253'; len=1394 Length = 1394 Genome Map Score = 533 bits (277), Expect = e-151 Identities = 312/330 (94%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 6 atcgtttcgagcaacaagaacaacaagtctatcactacacttaaacaaaatgaggagcgt 65 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1051 atcgtttcgagcaacaagaacaacaagtctatcactacacttaaacaaaatgaggagcga 1110 Query: 66 gaagaagacgagcaagcagagggagaagcaagaagcagcagcagcntccaccattattgc 125 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1111 gaagaagacgagcaagcagagggagaagcaagaagcagcagcagcatccaccagtattgc 1170 Query: 126 cgaaagatggcgcccatggcgcactaaggtcagcgcgccacctggcgacggcggctcgca 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1171 cgaaagatggcgcccatggcgcactaaggtcagcgcgccacctggcgacggcggctcgca 1230 Query: 186 ccggctgcattttgtttgacagttttccactaaggaagt--aaagnnnnnnnnttatgaa 243 ||||||||||||||||||||||||||||||||| ||||| ||| | ||||| Sbjct: 1231 ccggctgcattttgtttgacagttttccactaa-gaagtaaaaaaaaagaaaataatgaa 1289 Query: 244 aaccccccactctgtaagctagcaaattgtgtttaaagtataatnaaaaaattgtcgatt 303 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1290 aaccccccactctgtaagctagcaaattgtgtttaaagtataatgaaaaaattgtcgatt 1349 Query: 304 tcgttgcgagaaagaataaaantaaaagct 333 ||||||||||||||||||||| |||||||| Sbjct: 1350 tcgttgcgagaaagaataaaaataaaagct 1379 \# anon- EST:Posey6 = CG6253 >anon- EST:Posey6 ggcacgagtt tttttttncc taaaaataac actttctttt atttcctcca tggtggtgga tnttcatcaa gcagttactt tcgttaaagg tagtattttt tacttcttgg ccgcggcctt cttgccaccc ttggccttct cggcacncaa accctcgcaa caatccttct tgaggacccg gggattnccn tcagccttgg tgcnctnctt cattttttta aaggcaatgg tcagcacctt nttgcnctaa cccttggcat aacccacctt gaagcggtca aattctttca acaaggagcn cttgcaaatt ttctntgcct tgacggacca ggggctnacc ttccnctggg ccttcaggtc gctctctntc caggccttgc ccacaatc Database: dmel_all_transcript_r320 >CG6253-RA type=mRNA; loc= 3L:join (8559712..8559747,8560024..8560125, 8560358..8560552,8560813..8561109); ID=RpL14-RA; name=RpL14-RA; db_xref='CG6253,FlyBase:FBgn0017579'; len=630 Length = 630 Genome Map Score = 512 bits (266), Expect = e-144 Identities = 326/366 (89%) Strand = Plus / Minus Query: 19 cctaaaaataacactttcttttatttcctccatggtggtggatnttcatcaagcagttac 78 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 615 cctaaaaataacactttcttttattttctccatggtggtggatgttcatcaagcagttac 556 Query: 79 tttcgttaaaggtagtattttttacttcttggccgcggccttcttgccacccttggcctt 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 tttcgttaaaggtagtattttttacttcttggccgcggccttcttgccacccttggcctt 496 Query: 139 ctcggcacncaaaccctcgcaacaatccttcttgaggacccggggattnccntcagcctt 198 |||||||| || || ||||| || ||||||||||||||| |||||| | || |||||||| Sbjct: 495 ctcggcacgcagacgctcgcgacgatccttcttgaggacgcggggagtgccgtcagcctt 436 Query: 199 ggtgcnctncttcannnnnnnaaaggcaatggtcagcaccttnttgcnctaacccttggc 258 ||||| || ||||| ||||| |||||||||| ||| |||| || || |||||| Sbjct: 435 ggtgcgcttcttcagtgtgttgaaggcgatggtcagcagcttgttgcgctgacgcttggc 376 Query: 259 ataacccaccttgaagcggtcaaattctttcaacaaggagcncttgcaaattttctntgc 318 ||||| || ||||||||||||||| || |||||| |||||| |||||| || |||| ||| Sbjct: 375 ataacgcagcttgaagcggtcaaagtcgttcaacgaggagcgcttgcagatgttctgtgc 316 Query: 319 cttgacggaccaggggctnaccttccnctgggccttcaggtcgctctctntccaggcctt 378 |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| Sbjct: 315 cttgacggaccaggggctgaccttccactgggccttcaggtcgctctctgtccaggcctt 256 Query: 379 gcccac 384 || ||| Sbjct: 255 gcgcac 250 \# anon- EST:Posey64 = CG11593 >anon- EST:Posey64 ggcacgagat tttatagagg aacatacata tgcaaccaga aaccaccaaa cttccgaaca tgttaccttt cctttgtagt ggcaaaaaga aaaaaaaaaa acacaaagtt ggaaacggag caacacacta aactgaatct aaacataagt aattgaaaat ctttagctga attttgcatc ttatatcgca tattgtatat tccaagcgtt ccaaacacga cactttcgct gacacatgat ggaccccatg ccagtcgaca gtaggtgccc catttatctc atccaccatc agagttagcc gattagcctg taagtgaaat agcgaccatt ctttgtggaa tctacacacg gacacacgta gaatctctct agcggataat gtgacgtaca attaggcaat gtaaccgatt gatattaaga gcgacatttt gtggtttcct tttaccgctt taaacaaaca ataataataa agtgcaagat gatttttatt tattacgcaa taaaaa Database: dmel_all_transcript_r320 >CG11593-RA type=mRNA; loc= 3L:complement (4018216..4019208,4019271..4019381, 4019443..4020660,4020725..4021111); ID=CG11593-RA; name=CG11593-RA; db_xref='CG11593,FlyBase:FBgn0035488'; len=2709 Length = 2709 Genome Map Score = 819 bits (426), Expect = 0.0 Identities = 451/470 (95%), Gaps = 1/470 (0%) Strand = Plus / Plus Query: 9 attttatagaggaacatacatatgcaaccagaaaccaccaaacttccgaacatgttacct 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2240 attttatagaggaacatacatatgcaaccagaaaccaccaaacttccgaacatgttacct 2299 Query: 69 ttcctttgtagtggcnnnnnnnnnnnnnnnnnncacaaagttggaaacggagcaacacac 128 ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2300 ttcctttgtagtggcaaaaagaaaaaaaaaaaacacaaagttggaaacggagcaacacac 2359 Query: 129 taaactgaatctaaacataagtaattgaaaatctttagctgaattttgcatcttatatcg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2360 taaactgaatctaaacataagtaattgaaaatctttagctgaattttgcatcttatatcg 2419 Query: 189 catattgtatattccaagcgttccaaacacgacactttcgctgacacatgatggacccca 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2420 catattgtatattccaagcgttccaaacacgacactttcgctgacacatgatggacccca 2479 Query: 249 tgccagtcgacagtaggtgccccatttatctcatccaccatcagagttagccgattagcc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 tgccagtcgacagtaggtgccccatttatctcatccaccatcagagttagccgattagcc 2539 Query: 309 tgtaagtgaaatagcgaccattctttgtggaatctacacacggacacacgtagaatctct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2540 tgtaagtgaaatagcgaccattctttgtggaatctacacacggacacacgtagaatctct 2599 Query: 369 ctagcggataatgtgacgtacaattaggcaatgtaaccgattgatattaagagcgacatt 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2600 ctagcggataatgtgacgtacaattaggcaatgtaaccgattgatattaagagcgacatt 2659 Query: 429 ttg-tggtttccttttaccgctttaaacaaacaataataataaagtgcaa 477 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2660 ttgttggtttccttttaccgctttaaacaaacaataataataaagtgcaa 2709 \# anon- EST:Posey65 = CG16982 >anon- EST:Posey65 ggcacgagag cgctttgagg tgaagaagtg gaacgccgtg gctctgtggg cctgggacat cgtggtggac aactgcgcca tctgccgcaa ccacatcatg gacttgtgca tcgagtgtca ggcgaaccag gcgtccgcca ctagcgagga gtgcaccgtg gcctggggcg tctgcaacca cgccttccat ttccactgca tctctcgctg gctaaagacg cgccaggtat gcccactgga caaccgcgag tgggatttcc agaagtacgg ccactaaaat ctacaaaacc cccaagaccc accagatgga gggagcagca cttcccgcaa gctagatgat ggaggcctgc ttcatctgga catttgaata cctttttaga tcttaagcta gtggggcgat tcgagtgaac tggtagcctt taggagcaca gttaccgatt tccgagactt ccccgggaag cgcacctttt tgtacgcgtt aaataaaagc tgtagaagat ggagaaagac tnaaaaa Database: dmel_all_transcript_r320 >CG16982-RA type=mRNA; loc= X:join (404724..404962,405047..405074, 405140..406040); ID=Roc1a-RA; name=Roc1a-RA; db_xref='CG16982,FlyBase:FBgn0025638'; len=1168 Length = 1168 Genome Map Score = 929 bits (483), Expect = 0.0 Identities = 497/499 (99%), Gaps = 2/499 (0%) Strand = Plus / Plus Query: 9 agcgctttgaggtgaagaagtggaacgccgtggctctgtgggcctgggacatcgtggtgg 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 agcgctttgaggtgaagaagtggaacgccgtggctctgtgggcctgggacatcgtggtgg 279 Query: 69 acaactgcgccatctgccgcaaccacatcatggacttgtgcatcgagtgtcaggcgaacc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 acaactgcgccatctgccgcaaccacatcatggacttgtgcatcgagtgtcaggcgaacc 339 Query: 129 aggcgtccgccactagcgaggagtgcaccgtggcctggggcgtctgcaaccacgccttcc 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aggcgtccgccactagcgaggagtgcaccgtggcctggggcgtctgcaaccacgccttcc 399 Query: 189 atttccactgcatctctcgctggctaaagacgcgccaggtatgcccactggacaaccgcg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atttccactgcatctctcgctggctaaagacgcgccaggtatgcccactggacaaccgcg 459 Query: 249 agtgggatttccagaagtacggccactaaaatctacaaaacccccaagacccaccagatg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agtgggatttccagaagtacggccactaaaatctacaaaacccccaagacccaccagatg 519 Query: 309 gagggagcagcacttcccgcaagctagatgatggaggcctgcttcatctggacatttgaa 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gagggagcagcacttcccgcaagctagatgatggaggcctgcttcatctggacatttgaa 579 Query: 369 tacctttttagatcttaagctagtggggcgattcgagtgaactggtagcctttaggagca 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 tacctttttagatcttaagctagtggggcgattcgagtgaactggtagcctttaggagca 639 Query: 429 cagttaccgatttccgagacttccccgggaagcgcacctttttgt-acgcgttaaataaa 487 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 640 cagttaccgatttccgagac-tccccgggaagcgcacctttttgtaacgcgttaaataaa 698 Query: 488 agctgtagaagatggagaa 506 ||||||||||||||||||| Sbjct: 699 agctgtagaagatggagaa 717 \# anon- EST:Posey67 = CG8309 >anon- EST:Posey67 gcacgagaag cgccgaagac gtgtgtgcgt gttattttca gctgaatttg tttaaaaaag tggaataaca tttaacaaaa ccatgacttc gcatccggtt ttcatagacc tgtccctgga cgagcaggtg caagagctgc gcaagtattt caagaagctg ggagccgaaa tctcatcgga gaagtccaat aaaggtgtgg aggatgattt gcacaagatc atcggcgtct gcgacgtttg ctttaaggat ggtgagccct cgcagattga tggcattctg aacagcattg tgtccatcat gatcacgata cccctggatc gcggtgagaa cattgtcctg gcctactgcg agaagatgac caaggctccc aatcttccat tgggcaaagg tgtgccttnc agtcgttgtg gcgtctgttc aacnaacctg gacaccgcct ctcctttacg ctaccatgtg tactaccacc tggtccaggt ggccaagcag tgcgaacagg tgctggaggt cttctcaggt gtggatcagc tcaaatccca gtttgccaac tgcccacctt cgtcggaaca gatgcagaag ctgtaccgcc tgctgcacga cgtgaccaag gacaccaacc tggagctgtc ttccaaggtt atgattgagc tgctgggcac ctacacggcg gacaatgctt gtgttgcccg tgaggatgcc atgaagtgca ttgtgactgc cttggctgac cccaatacat tcctgctgga tcctctgctg tcgctgaagc ctgtgcgctt tttggaaggc gacctcatcc acgacctgct gtccatcttc gtgtccgaga agctgccagc gtacgtgcag ttctacgagg atcacaggga gtttgtcaac tcgcaaggat tgaaccatga gcagaacatg aagnaagatg cgtctgctga ccttcatgca gctggccgag agcagcccgg agatgacatt cgaaancgct taccaaggag ctgcagatca acgaagacga ggtggagccc ttcgtcattg aggtgctgaa aacaaagctg gtacgcgcac gactagatca ggccaatcaa aaggtacaca tctcatcgac aatgcaccga acctttggag caccacaatg ggagcagctt cgcgatttgc tgcaggcatg gaaggagaac ctcagcacag tgcgcgaggg tctaacgagc gtctcctcgg cgcaactgga tctggctcga tcccagaagc tgatacacta ggcgcaccac ttccaaaaaa attgcactga tgatgaacaa atgctggcct cggggcactg gagtgacgac ctaaattatt ttcaagaatg cgagagggct ggataacttg aataaattta taagtaaaat ctgtaaaaag cccggg Database: dmel_all_transcript_r320 >CG8309-RA type=mRNA; loc= 2R:complement (9227837..9228907,9228962..9229141, 9229258..9229640); ID=CG8309-RA; name=CG8309-RA; db_xref='CG8309,FlyBase:FBgn0033902'; len=1634 Length = 1634 Genome Map Score = 2498 bits (1299), Expect = 0.0 Identities = 1357/1374 (98%), Gaps = 6/1374 (0%) Strand = Plus / Plus Query: 8 aagcgccgaagacgtgtgtgcgtgttattttcagctgaatttgtttaaaaaagtggaata 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 aagcgccgaagacgtgtgtgcgtgttattttcagctgaatttgtttaaaaaagtggaata 323 Query: 68 acatttaacaaaaccatgacttcgcatccggttttcatagacctgtccctggacgagcag 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 acatttaacaaaaccatgacttcgcatccggttttcatagacctgtccctggacgagcag 383 Query: 128 gtgcaagagctgcgcaagtatttcaagaagctgggagccgaaatctcatcggagaagtcc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtgcaagagctgcgcaagtatttcaagaagctgggagccgaaatctcatcggagaagtcc 443 Query: 188 aataaaggtgtggaggatgatttgcacaagatcatcggcgtctgcgacgtttgctttaag 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 aataaaggtgtggaggatgatttgcacaagatcatcggcgtctgcgacgtttgctttaag 503 Query: 248 gatggtgagccctcgcagattgatggcattctgaacagcattgtgtccatcatgatcacg 307 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 504 gatggtgagccctcgcagattgatggaattctaaacagcattgtgtccatcatgatcacg 563 Query: 308 atacccctggatcgcggtgagaacattgtcctggcctactgcgagaagatgaccaaggct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 atacccctggatcgcggtgagaacattgtcctggcctactgcgagaagatgaccaaggct 623 Query: 368 cccaatcttccattgggcaaaggtgtgccttncagtcgttgtggcgtctgttcaacnaac 427 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct: 624 cccaatcttccattgggcaa-ggtgtgcctt-cagtcgttgtggcgtctgttcaac-aac 680 Query: 428 ctggacaccgcctctcctttacgctaccatgtgtactaccacctggtccaggtggccaag 487 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 ctggacaccgcctctcccttacgctaccatgtgtactaccacctggtccaggtggccaag 740 Query: 488 cagtgcgaacaggtgctggaggtcttctcaggtgtggatcagctcaaatcccagtttgcc 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 cagtgcgaacaggtgctggaggtcttctcaggtgtggatcagctcaaatcccagtttgcc 800 Query: 548 aactgcccaccttcgtcggaacagatgcagaagctgtaccgcctgctgcacgacgtgacc 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 aactgcccaccttcgtcggaacagatgcagaagctgtaccgcctgctgcacgacgtgacc 860 Query: 608 aaggacaccaacctggagctgtcttccaaggttatgattgagctgctgggcacctacacg 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 aaggacaccaacctggagctgtcttccaaggttatgattgagctgctgggcacctacacg 920 Query: 668 gcggacaatgcttgtgttgcccgtgaggatgccatgaagtgcattgtgactgccttggct 727 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 gcggacaatgcttgtgttgcccgtgaggatgccatgaagtgcattgtgactgccttggcc 980 Query: 728 gaccccaatacattcctgctggatcctctgctgtcgctgaagcctgtgcgctttttggaa 787 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 gaccccaatacattcctgctggatcctctgctgtcgctgaagcctgtgcgctttttggaa 1040 Query: 788 ggcgacctcatccacgacctgctgtccatcttcgtgtccgagaagctgccagcgtacgtg 847 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 ggcgacctcatccacgacctgctgtccatcttcgtgtccgagaagctgccagcgtacgtg 1100 Query: 848 cagttctacgaggatcacagggagtttgtcaactcgcaaggattgaaccatgagcagaac 907 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1101 cagttctacgaggatcacagggagtttgtcaactcgcaaggattgaaccatgagcagaac 1160 Query: 908 atgaagnaagatgcgtctgctgaccttcatgcagctggccgagagcagcccggagatgac 967 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 atgaag-aagatgcgtctgctgaccttcatgcagctggccgagagcagcccggagatgac 1219 Query: 968 attcgaaancgcttaccaaggagctgcagatcaacgaagacgaggtggagcccttcgtca 1027 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 attcgaaa-cgcttaccaaggagctgcagatcaacgaagacgaggtggagcccttcgtca 1278 Query: 1028 ttgaggtgctgaaaacaaagctggtacgcgcacgactagatcaggccaatcaaaaggtac 1087 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1279 tcgaggtgctgaaaacaaagctggtacgcgcacgactagatcaggccaatcaaaaggtac 1338 Query: 1088 acatctcatcgacaatgcaccgaacctttggagcaccacaatgggagcagcttcgcgatt 1147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1339 acatctcatcgacaatgcaccgaacctttggagcaccacaatgggagcagcttcgcgatt 1398 Query: 1148 tgctgcaggcatggaaggagaacctcagcacagtgcgcgagggtctaacgagcgtctcct 1207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1399 tgctgcaggcatggaaggagaacctcagcacagtgcgcgagggtctaacgagcgtctcct 1458 Query: 1208 cggcgcaactggatctggctcgatcccagaagctgatacactaggcgcaccacttccnnn 1267 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1459 cggcgcaactggatctggctcgatcccagaagctgatacactaggcgcaccacttcc-aa 1517 Query: 1268 nnnnttgcactgatgatgaacaaatgctggcctcggggcactggagtgacgacctaaatt 1327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1518 aaaattgcactgatgatgaacaaatgctggcctcggggcactggagtgacgacctaaatt 1577 Query: 1328 attttcaagaatgcgagagggctggataacttgaataaatttataagtaaaatc 1381 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1578 attttcaagaatgcgagagggctggataacttgaataaatttataagtaaaatc 1631 \# anon- EST:Posey69 = CG31543 >anon- EST:Posey69 acccaccaaa cccaaaaaaa gagacgaatt cggcacgagg ccgacagcgc agctaaaggc aaccaaaaag tgtaaattat tttcaaccaa acacacatgt ataaagctag ttaaaaacta tttatagctt cggaggggcg gcagcgcaag cccgcattgc gaaagttaat caaagctcct ttagtcgtta agccttctag tttagtctct aagtcgtacc cttagtcatt ttcgcattaa ccattagctt actgccatgt cagcgtccga gttggttgtt tattaatttt agtttgttgc atctttgtca ggaccttttg cctagctcat tcttagtttt tggctgccaa agtattatac ctaaagagaa gttaactaga ttcaataaca taagcaactg tcgcgacgct cattgcatct tatctcaaaa ttatttaaca agccagtaaa tcgtggacaa acgcggtcac tggctaacac tcaatctgtc gactctcatg catcttgtta gacatctttt tcatatcgtt tacatctaat aacaaacgga aataaatgtt ngtccanata cgttctcttg ttatctgtaa atcatgaagt atgtatattt atgacatatc tacatattgt atgtatattt tttatattaa acaaaagcct gagctgatga accacgtgtg gccnacattt gtctacgtgg ttgtagagag atggatttta taagtg Database: dmel_all_transcript_r320 >CG31543-RB type=mRNA; loc= 3R:join (1090663..1090921,1092472..1092751, 1092840..1092920,1092982..1093121,1093181..1094194); ID=Hph-RB; name=Hph-RB; db_xref='CG31543,FlyBase:FBgn0037308'; len=1774 Length = 1774 Genome Map Score = 1204 bits (626), Expect = 0.0 Identities = 628/630 (99%) Strand = Plus / Plus Query: 40 gccgacagcgcagctaaaggcaaccaaaaagtgtaaattattttcaaccaaacacacatg 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 gccgacagcgcagctaaaggcaaccaaaaagtgtaaattattttcaaccaaacacacatg 1204 Query: 100 tataaagctagttaaaaactatttatagcttcggaggggcggcagcgcaagcccgcattg 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1205 tataaagctagttaaaaactatttatagcttcggaggggcggcagcgcaagcccgcattg 1264 Query: 160 cgaaagttaatcaaagctcctttagtcgttaagccttctagtttagtctctaagtcgtac 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 cgaaagttaatcaaagctcctttagtcgttaagccttctagtttagtctctaagtcgtac 1324 Query: 220 ccttagtcattttcgcattaaccattagcttactgccatgtcagcgtccgagttggttgt 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 ccttagtcattttcgcattaaccattagcttactgccatgtcagcgtccgagttggttgt 1384 Query: 280 ttattaattttagtttgttgcatctttgtcaggaccttttgcctagctcattcttagttt 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 ttattaattttagtttgttgcatctttgtcaggaccttttgcctagctcattcttagttt 1444 Query: 340 ttggctgccaaagtattatacctaaagagaagttaactagattcaataacataagcaact 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1445 ttggctgccaaagtattatacctaaagagaagttaactagattcaataacataagcaact 1504 Query: 400 gtcgcgacgctcattgcatcttatctcaaaattatttaacaagccagtaaatcgtggaca 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1505 gtcgcgacgctcattgcatcttatctcaaaattatttaacaagccagtaaatcgtggaca 1564 Query: 460 aacgcggtcactggctaacactcaatctgtcgactctcatgcatcttgttagacatcttt 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1565 aacgcggtcactggctaacactcaatctgtcgactctcatgcatcttgttagacatcttt 1624 Query: 520 ttcatatcgtttacatctaataacaaacggaaataaatgttngtccanatacgttctctt 579 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1625 ttcatatcgtttacatctaataacaaacggaaataaatgtttgtccaaatacgttctctt 1684 Query: 580 gttatctgtaaatcatgaagtatgtatatttatgacatatctacatattgtatgtatatt 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685 gttatctgtaaatcatgaagtatgtatatttatgacatatctacatattgtatgtatatt 1744 Query: 640 ttttatattaaacaaaagcctgagctgatg 669 |||||||||||||||||||||||||||||| Sbjct: 1745 ttttatattaaacaaaagcctgagctgatg 1774 \# anon- EST:Posey7 = end of CHES-1-like ? >anon- EST:Posey7 ggcacgaggt tacacgtaca tagttgaaat atgctaaaca tttgttaaca cgaatccaat cgtaagctag ccgattttag ttgaatgaac ctcctgcaat tttcctaccc aaggtgtaca tatatacaaa atggattaag ctgttgaaat gatgctgcac atctttacat aggcatattg tggaaaccaa gaaatactta ttaattaaat aattaaatag gcgaaaggaa aaaaacttga caaagaacgc cctaagtgtt tacacttcat gtaccttttt agcaaaaagc aaaaaacgca aaagcaaaga tcgcattaaa attgtataca tacattatat ttaaactacc aattacgaaa ctaaactaaa tgttgatgtc aaagagaaac caatttgcta gttgttacca atcagaaaag aacactttaa acaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003441 |gb|AE003441| arm:X 7253939..7539888 estimated- cyto:7B3-7B8 gadfly- seqname:AE003441 seq_release:3 Length = 285950 Score = 498 bits (259), Expect = e-140 Genome Map Identities = 266/273 (97%) Strand = Plus / Minus Query: 8 ggttacacgtacatagttgaaatatgctaaacatttgttaacacgaatccaatcgtaagc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171016 ggttacacgtacatagttgaaatatgctaaacatttgttaacacgaatccaatcgtaagc 170957 Query: 68 tagccgattttagttgaatgaacctcctgcaattttcctacccaaggtgtacatatatac 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170956 tagccgattttagttgaatgaacctcctgcaattttcctacccaaggtgtacatatatac 170897 Query: 128 aaaatggattaagctgttgaaatgatgctgcacatctttacataggcatattgtggaaac 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170896 aaaatggattaagctgttgaaatgatgctgcacatctttacataggcatattgtggaaac 170837 Query: 188 caagaaatacttattaattaaataattaaataggcgaaaggnnnnnnncttgacaaagaa 247 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 170836 caagaaatacttattaattaaataattaaataggcgaaaggaaaaaaacttgacaaagaa 170777 Query: 248 cgccctaagtgtttacacttcatgtaccttttt 280 ||||||||||||||||||||||||||||||||| Sbjct: 170776 cgccctaagtgtttacacttcatgtaccttttt 170744 Score = 237 bits (123), Expect = 2e-61 Genome Map Identities = 127/129 (98%) Strand = Plus / Minus Query: 309 gatcgcattaaaattgtatacatacattatatttaaactaccaattacgaaactaaacta 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170715 gatcgcattaaaattgtatacatacattatatttaaactaccaattacgaaactaaacta 170656 Query: 369 aatgttgatgtcaaagagaaaccaatttgctagttgttaccaatcagaaaagaacacttt 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 170655 aatgttgatgtcaaagagaaaccaatttgctagttgttaccaatcagaaaagaacacata 170596 Query: 429 aaacaaaaa 437 ||||||||| Sbjct: 170595 aaacaaaaa 170587 Score = 33.4 bits (17), Expect = 4.8 Genome Map Identities = 19/20 (95%) Strand = Plus / Plus Query: 159 acatctttacataggcatat 178 ||||||||||||| |||||| Sbjct: 6725 acatctttacatacgcatat 6744 \# anon- EST:Posey79 = CG5889 >anon- EST:Posey79 ggcacgagat cgattacccc ctacaaaccg accgcctaga acaattggct agacagcaga gctaactggt gagaacaacc caaacaagca aacaaccaaa caactaaaca gccaaccatc caaccgattc cacatgtaaa acaacttaac tcgctgccgt taaccaccac caactatcta agttagaaca ttatgctttc tatcgattag ttcacttata tctgtagata tattcgagcg acgattatgt ttgttgttta gccatatctg atatttatta acgcaattaa gcagctttgt tataatttat tgttaaaagg tcgagcctaa tgtatcagta actagaaaac ctaacccctt atgatcgatc ggaccgattc agccattgta ccactgacta gatgatgatg atgtgcgata aacaataaaa cgaaaacaca agttaaaaa Database: dmel_all_transcript_r320 >CG5889-RA type=mRNA; loc= 3R:join (22966728..22966993,22969303..22969477, 22969543..22970592,22970653..22970805,22970865..22971159, 22971228..22971356,22971427..22972693); ID=Mdh-RA; name=Mdh-RA; db_xref='CG5889,FlyBase:FBgn0029155'; len=3335 Length = 3335 Genome Map Score = 621 bits (323), Expect = e-177 Identities = 323/323 (100%) Strand = Plus / Plus Query: 125 cgattccacatgtaaaacaacttaactcgctgccgttaaccaccaccaactatctaagtt 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3013 cgattccacatgtaaaacaacttaactcgctgccgttaaccaccaccaactatctaagtt 3072 Query: 185 agaacattatgctttctatcgattagttcacttatatctgtagatatattcgagcgacga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3073 agaacattatgctttctatcgattagttcacttatatctgtagatatattcgagcgacga 3132 Query: 245 ttatgtttgttgtttagccatatctgatatttattaacgcaattaagcagctttgttata 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 ttatgtttgttgtttagccatatctgatatttattaacgcaattaagcagctttgttata 3192 Query: 305 atttattgttaaaaggtcgagcctaatgtatcagtaactagaaaacctaaccccttatga 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3193 atttattgttaaaaggtcgagcctaatgtatcagtaactagaaaacctaaccccttatga 3252 Query: 365 tcgatcggaccgattcagccattgtaccactgactagatgatgatgatgtgcgataaaca 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3253 tcgatcggaccgattcagccattgtaccactgactagatgatgatgatgtgcgataaaca 3312 Query: 425 ataaaacgaaaacacaagttaaa 447 ||||||||||||||||||||||| Sbjct: 3313 ataaaacgaaaacacaagttaaa 3335 Score = 112 bits (58), Expect = 3e-24 Identities = 65/66 (98%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 9 atcgattaccccc-tacaaaccgaccgcctagaacaattggctagacagcagagctaact 67 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2896 atcgattacccccctacaaaccgaccgcctagaacaattggctagacagcagagctaact 2955 Query: 68 ggtgag 73 |||||| Sbjct: 2956 ggtgag 2961 \# anon- EST:Posey83 = ? >anon- EST:Posey83 gcgcgaggtn cccaacgcct tttcctcatt tggcgcacca caaaagcgga aagcgaccac agagccccaa gcacactgag attgccggag acaaccanca gccaagtctg aagccaaaat cgaatcgaag tcctaancga atatcaaatc caagcccaaa accaaancct actattaaca aatagccnat agcgaggagt tcacgaagga gtcctgcaaa cacatccttt caacacagtg caagctcgcc attttgtgtt ttttcgaaat agaaaaagtt tttaaaagcc ataccgcaag attctgcatt aaatatatac acacatatat ttatatttcc atttttccgt gcgtatacgt gatctgcgtc gaagtcagtt cattctgtcc atgatttaca aatatattta tacataatty gccactgaga gaaccgcgaa gtgtaragtg caagtgaagt tcagtattat ttacaaggcg tgaaaatcga aaaagtttac accaaatatt ctgctcaaga actcactact caragtagtc caaggattcc agtctctcag cgcaacaatt gtcagcgaaa attcctacga atcttagcca gctaaaaact ctaattraag tcagacgaaa gcacaactac raagggttaa aaactctgaa agcaagaaag aaattaacta aatattaaag gaatcttcga agtgaacacc aaagcaaaga tctacagtat tattttgaat aagaaatata taaaacacac tctaagcgat aaatagagac aataaagttg aaataaaaaa accaaattaa atttgtgact ctagcctaaa agtaaacaca tanaccctag cttaatt Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003567 |gb|AE003567| arm:3L 5083015..5237352 estimated- cyto:64C9-64C12 gadfly- seqname:AE003567 seq_release:3 Length = 154338 Score = 1513 bits (785), Expect = 0.0 Genome Map Identities = 820/845 (97%), Gaps = 1/845 (0%) Strand = Plus / Minus Query: 14 aacgccttttcctcatttggcgcaccacaaaagcggaaagcgaccacagagccccaagca 73 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 149622 aacgccttttcctcattttgcgcaccacaaaagcggaaagcgaccacagagccccaagca 149563 Query: 74 cactgagattgccggagacaaccancagccaagtctgaagccaaaatcgaatcgaagtcc 133 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 149562 cactgagattgccggagacaaccaacagccaagtctgaagccaaaatcgaatcgaagtcc 149503 Query: 134 taancgaatatcaaatccaagcccaaaaccaaancctactattaacaaatagccnatagc 193 ||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 149502 taatcgaatatcaaattcaagcccaaaaccaaatcctactattaacaaatagccaatagc 149443 Query: 194 gaggagttcacgaaggagtcctgcaaacacatcctttcaacacagtgcaagctcgccatt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149442 gaggagttcacgaaggagtcctgcaaacacatcctttcaacacagtgcaagctcgccatt 149383 Query: 254 ttgtgttttttcgaaatagaaaaagtttttaaaagccataccgcaagattctgcattaaa 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149382 ttgtgttttttcgaaatagaaaaagtttttaaaagccataccgcaagattctgcattaaa 149323 Query: 314 tatatacacacatatatttatatttccatttttccgtgcgtatacgtgatctgcgtcgaa 373 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 149322 tatatacatacatatatttatatttccatttttccgtgcgtatacgtaatctgcgtcgaa 149263 Query: 374 gtcagttcattctgtccatgatttacaaatatatttatacataattygccactgagagaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 149262 gtcagttcattctgtccatgatttacaaatatatttatacataattagccactgagagaa 149203 Query: 434 ccgcgaagtgtaragtgcaagtgaagttcagtattatttacaaggcgtgaaaatcgaaaa 493 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149202 ccgcgaagtgtaaagtgcaagtgaagttcagtattatttacaaggcgtgaaaatcgaaaa 149143 Query: 494 agtttacaccaaatattctgctcaagaactcactactcaragtagtccaaggattccagt 553 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 149142 agtttacaccaaatattctgctcaagaactcactactcaaagtagtccaaggattccagt 149083 Query: 554 ctctcagcgcaacaattgtcagcgaaaattcctacgaatcttagccagctaaaaactcta 613 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 149082 ctctcagcgcaacaattgtcagcgaaaattcctacgaatcttagccaactaagaactcta 149023 Query: 614 attraagtcagacgaaagcacaactacraagggttaaaaactctgaaagcaagaaagaaa 673 ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 149022 attaaagtcagacgaaagcacaactacaaagggttaaaaactctgaaagtaagaaagaaa 148963 Query: 674 ttaactaaatattaaaggaatcttcgaagtgaacaccaaagcaaagatctacagtattat 733 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148962 ttaactaaatattaaaggaatcttcgaagtgaacaccaaagcaaagatctacagtattat 148903 Query: 734 tttgaataagaaatatataaaacacactctaagcgataaatagagacaataaagttgaaa 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148902 tttgaataagaaatatataaaacacactctaagcgataaatagagacaataaagttgaaa 148843 Query: 794 t-nnnnnnnccaaattaaatttgtgactctagcctaaaagtaaacacatanaccctagct 852 | ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 148842 taaaaaaaaccaaattaaatttgtgactctagcctaaaagtaaacacataaaccctagct 148783 Query: 853 taatt 857 ||||| Sbjct: 148782 taatt 148778 \# anon- EST:Posey9 = CG9325 >anon- EST:Posey9 ggcacgaggg taaagcaaat gaacagataa aaaagggtac aaattcccag gcaactctaa cgacaaacaa agatttgttt gaaacaaagg caaacttttg tttttagaca catacgtaca agcgtggtac atgcataata cttaaatgca atattttttt agaaatgcaa taaattcgat gacaacaact acaatttgat attctaggca tgtgtgtgtt ttgtgaaagc gcgttttatg tttttgtgtn ctttngtttn gttttnaaat tccgggcagc cacaatttgc acacaaaaca aataaataat tattgtatac atgcagcaat tgtattagtt ttttatataa ataattatat atttttatgt acgtaaaact gtttatacat acatatacat atatatattt ataaaaacca ataaattatg aagaaaacga aaatccaaaa atacaccacg cccgcattaa aacatgcgat tantctgagg aaagcagaaa caacacnatc actgagaatg gttggaattt tccaaaaatt atctccaaga atcaaatttc agcatttctt ttgtaagtag atgtgcttga tttgtaatcg cttttccatt tataatattc aaatcgatga ataacgaata ctgcacatta actatatacg actgccatag catgtaaaac tttaaggcac aacttaaacg catttacatt tcaaattaac tgacataaaa ttaaaacccc gatgattaat gccagataaa tcgaatgttt ctgcttttcc tacccaaacc caccacca Database: dmel_all_transcript_r320 >CG9325-RF type=mRNA; loc= 2R:complement (14461055..14462519,14462746..14462813, 14471561..14471632,14471695..14471775,14471844..14472138, 14472203..14472313,14473340..14473463,14473525..14474236, 14474310..14474793,14474880..14474991,14482277..14482325, 14487314..14487814); ID=hts-RF; name=hts-RF; db_xref='CG9325,FlyBase:FBgn0004873'; len=4074 Length = 4074 Genome Map Score = 717 bits (373), Expect = 0.0 Identities = 382/385 (99%), Gaps = 1/385 (0%) Strand = Plus / Plus Query: 414 aaaaccaataaattatgaagaaaacgaaaatccaaaaatacaccacgcccgcattaaaac 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3627 aaaaccaataaattatgaagaaaacgaaaatccaaaaatacaccacgcccgcattaaaac 3686 Query: 474 atgcgattantctgaggaaagcagaaacaacacnatcactgagaatggttggaattttcc 533 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3687 atgcgattactctgaggaaagcagaaacaacacaatcactgagaatggttggaattttcc 3746 Query: 534 aaaaattatctccaagaatcaaatttcagcatttcttttgtaagtagatgtgcttgattt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3747 aaaaattatctccaagaatcaaatttcagcatttcttttgtaagtagatgtgcttgattt 3806 Query: 594 gtaatcgcttttccatttataatattcaaatcgatgaataacgaatactgcacattaact 653 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3807 gtaatcgcttttccatttataatattcaaatcgatgaataacgaatactgca-attaact 3865 Query: 654 atatacgactgccatagcatgtaaaactttaaggcacaacttaaacgcatttacatttca 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3866 atatacgactgccatagcatgtaaaactttaaggcacaacttaaacgcatttacatttca 3925 Query: 714 aattaactgacataaaattaaaaccccgatgattaatgccagataaatcgaatgtttctg 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3926 aattaactgacataaaattaaaaccccgatgattaatgccagataaatcgaatgtttctg 3985 Query: 774 cttttcctacccaaacccaccacca 798 ||||||||||||||||||||||||| Sbjct: 3986 cttttcctacccaaacccaccacca 4010 Score = 404 bits (210), Expect = e-112 Identities = 217/224 (96%) Strand = Plus / Plus Query: 9 ggtaaagcaaatgaacagataaaaaagggtacaaattcccaggcaactctaacgacaaac 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3222 ggtaaagcaaatgaacagataaaaaagggtacaaattcccaggcaactctaacgacaaac 3281 Query: 69 aaagatttgtttgaaacaaaggcaaacttttgtttttagacacatacgtacaagcgtggt 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3282 aaagatttgtttgaaacaaaggcaaacttttgtttttagacacatacgtacaagcgtggt 3341 Query: 129 acatgcataatacttaaatgcaatannnnnnnagaaatgcaataaattcgatgacaacaa 188 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3342 acatgcataatacttaaatgcaatatttttttagaaatgcaataaattcgatgacaacaa 3401 Query: 189 ctacaatttgatattctaggcatgtgtgtgttttgtgaaagcgc 232 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3402 ctacaatttgatattctaggcatgtgtgtgttttgtgaaagcgc 3445 Score = 162 bits (84), Expect = 5e-39 Identities = 86/87 (98%) Strand = Plus / Plus Query: 267 aaattccgggcagccacaatttgcacacaaaacaaataaataattattgtatacatgcag 326 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3480 aaattccgggcagccacaatttgcacacaaaacgaataaataattattgtatacatgcag 3539 Query: 327 caattgtattagttttttatataaata 353 ||||||||||||||||||||||||||| Sbjct: 3540 caattgtattagttttttatataaata 3566 \# anon- EST:Posey93 = end of dlg1 ? >anon- EST:Posey93 ggcacgaggt tgcggtctaa ttttatacac accagacaaa tcgaattgca aataaataaa taattaagaa agtgacaatg gagaagcaga gctggagatg agatcaactc aaactagata actatacata tatttgctga ttaatttatg taaaccaata tacgatttat agccaacgca cagaaaatga aaaacaaaaa aaagcaacac atacgaaatt tgttcgaaaa aatttagcta aattcaagtt gagtgttaac attataattc atgcgaatat gcatatattc aatttttttt tttaactctc catctctcct gctcgccatt atacgaacta cttaaaacat ttttttttaa ttaaattttt tgtatattgc aaaaacgtcg acgacgccac agcagcagca gctatggata ttatttcaaa aatatataca tataactatt atacgaataa agagaaaaca aattcattat aattttcaca atgtatgcgc cgagagcatt gtatatttaa taaacaacct aaacaaaagg acaaacatgg aaacaaataa aactatgcga ataatttcac tctaacaaaa tgcaaacaag caaccaaaaa Database: dmel_all_scaffolds_r310 >gadfly| SEG:AE003486 |gb|AE003486| arm:X 11111476..11439603 estimated- cyto:10B6-10D5 gadfly- seqname:AE003486 seq_release:3 Length = 328128 Score = 858 bits (446), Expect = 0.0 Genome Map Identities = 545/597 (91%), Gaps = 9/597 (1%) Strand = Plus / Plus Query: 9 gttgcggtctaattttatacacaccagacaaatcgaattgcaaataaataaataattaag 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38275 gttgcggtctaattttatacacaccagacaaatcgaattgcaaataaataaataattaag 38334 Query: 69 aaagtgacaatggagaagcagagctggagatgagatcaactcaaactagataactataca 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38335 aaagtgacaatggagaagcagagctggagatgagatcaactcaaactagataactataca 38394 Query: 129 tatatttgctgattaatttatgtaaaccaatatacgatttatagccaacgcacagnnnnn 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38395 tatatttgctgattaatttatgtaaaccaatatacgatttatagccaacgcacagaaaat 38454 Query: 189 nnnnnnnnnnnnnnngcaacacatacgaaatttgttcgaaaaaatttagctaaattcaag 248 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 38455 gaaaaacaaaaaaaagcaatacatacgaaatttgttcgaaaaaatttagctaaattcaag 38514 Query: 249 ttgagtgttaacattataattcatgcgaatatgcatatattcaannnnnnnnnnnaactc 308 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 38515 ttgagtgttaacattataattcatgcgaatatgcatatattcaatttttttttttaactc 38574 Query: 309 tccatctctcctgctcgccattatacgaactacttaaaacannnnnnnnnaattaaattt 368 ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 38575 tccatctctcctgctcgccattatacgaactacttaaaacatttttttttaattaaattt 38634 Query: 369 tttgtatattgcaaaaacgtcgacgacgccacagcagcagcagctatggatattatttca 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38635 tttgtatattgcaaaaacgtcgacgacgccacagcagcagcagctatggatattatttca 38694 Query: 429 aaaatatatacatataactattatacgaataaagagaaaacaaattcattataattttca 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38695 aaaatatatacatataactattatacgaataaagagaaaacaaattcattataattttca 38754 Query: 489 caatgtatgcgccgagagcattg-tatatttaataaacaacctaaa--caaaaggacaaa 545 ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 38755 caatgtatgcgccgagagcattgttatatttaataaacaacctaaaacaaaaaggacaaa 38814 Query: 546 c-atgg-aaacaaa--taaaactatgcgaataattt-cactct-aacaaaatgcaaa 596 | |||| ||||||| ||||||||||||||||||| |||||| ||||||||||||| Sbjct: 38815 caatggaaaacaaaataaaaactatgcgaataatttccactctaaacaaaatgcaaa 38871 Score = 33.4 bits (17), Expect = 6.8 Genome Map Identities = 17/17 (100%) Strand = Plus / Plus Query: 428 aaaaatatatacatata 444 ||||||||||||||||| Sbjct: 148756 aaaaatatatacatata 148772 \# anon- EST:PoseyA1 = qbert >anon- EST:PoseyA1 ggcacgagag aatctgtatg cttaatctca accttcaggt tttatagatc ctgagatctc gactttcata gggacagaca tggccagatc gacttggcta ttcatcctga tcaagaatat atattctcta tgtggtcaga aacgcttcct tctgcctgtt acataaggca attttgccga ttgctcatat atttacaatc gtacacattc gggtacaagc cgaaccctgc gttgtccata cacagtctct gcagaattac tatcatcttt ttcagtttat tttttaaatt ttcaatatca tttgaaaata tatgcttctt acccgttact tgtagagtaa aagggtagag aaggaagcgt ttccgactac atgtagtatt tatattcttg atcaggatta acagcaaagt cgatcttacc ctctcagccg gtcaacggac aagggattaa caatgcccac ttcgcttatc gttctaattc taaagaggta ttgaacatgt gacggcagtg gttgtgggga ttttattagt gagtggtgaa atagaaagga attggataaa gcgtattgaa acataataac gtgcaagtgc aagtaaaaca aaggaaacaa acgaaatcaa gttcaaattg cttcacaggc gaccgtatat gtgtacatca aacgctgata aggcaccggg atcgcttgtg cgggacaatt tacaacaatt ataccaacaa gttactgtgt gtgatgaccg tatatgtgta catcaatcgc tgataaggca ccgggatcat ccatacaccc taact Database: dmel_all_transposon_r320 >FBti0019900 type=transposable_element; loc= 2R:301100..308748 ; Genome Map ID=FBti0019900; name=qbert{}625; map=41F1-41F1; db_xref='qbert{}625,FlyBase:FBan0069900'; len=7649 Length = 7649 Score = 606 bits (315), Expect = e-173 Identities = 315/315 (100%) Strand = Plus / Minus Query: 481 taaagaggtattgaacatgtgacggcagtggttgtggggattttattagtgagtggtgaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7390 taaagaggtattgaacatgtgacggcagtggttgtggggattttattagtgagtggtgaa 7331 Query: 541 atagaaaggaattggataaagcgtattgaaacataataacgtgcaagtgcaagtaaaaca 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7330 atagaaaggaattggataaagcgtattgaaacataataacgtgcaagtgcaagtaaaaca 7271 Query: 601 aaggaaacaaacgaaatcaagttcaaattgcttcacaggcgaccgtatatgtgtacatca 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7270 aaggaaacaaacgaaatcaagttcaaattgcttcacaggcgaccgtatatgtgtacatca 7211 Query: 661 aacgctgataaggcaccgggatcgcttgtgcgggacaatttacaacaattataccaacaa 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7210 aacgctgataaggcaccgggatcgcttgtgcgggacaatttacaacaattataccaacaa 7151 Query: 721 gttactgtgtgtgatgaccgtatatgtgtacatcaatcgctgataaggcaccgggatcat 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7150 gttactgtgtgtgatgaccgtatatgtgtacatcaatcgctgataaggcaccgggatcat 7091 Query: 781 ccatacaccctaact 795 ||||||||||||||| Sbjct: 7090 ccatacaccctaact 7076 Score = 79.5 bits (41), Expect = 4e-15 Identities = 43/44 (97%) Strand = Plus / Minus Query: 425 cagccggtcaacggacaagggattaacaatgcccacttcgctta 468 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 7432 cagccggtcaacggacaagggattaacaatgcccactacgctta 7389 Score = 71.8 bits (37), Expect = 8e-13 Identities = 41/43 (95%) Strand = Plus / Minus Query: 736 gaccgtatatgtgtacatcaatcgctgataaggcaccgggatc 778 ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 6562 gaccgaatatgtgcacatcaatcgctgataaggcaccgggatc 6520 Score = 69.9 bits (36), Expect = 3e-12 Identities = 42/45 (93%) Strand = Plus / Minus Query: 640 cgaccgtatatgtgtacatcaaacgctgataaggcaccgggatcg 684 |||||| ||||||| ||||||| |||||||||||||||||||||| Sbjct: 6563 cgaccgaatatgtgcacatcaatcgctgataaggcaccgggatcg 6519 Score = 60.3 bits (31), Expect = 2e-09 Identities = 39/43 (90%) Strand = Plus / Minus Query: 736 gaccgtatatgtgtacatcaatcgctgataaggcaccgggatc 778 ||||| ||||||||||| ||||||||| ||||||||||| ||| Sbjct: 6367 gaccgaatatgtgtacaacaatcgctgttaaggcaccggtatc 6325 Score = 58.4 bits (30), Expect = 9e-09 Identities = 40/45 (88%) Strand = Plus / Minus Query: 640 cgaccgtatatgtgtacatcaaacgctgataaggcaccgggatcg 684 |||||| ||||||||||| ||| ||||| ||||||||||| |||| Sbjct: 6368 cgaccgaatatgtgtacaacaatcgctgttaaggcaccggtatcg 6324 \# anon- EST:CL1d7 = CG10391 >anon- EST:CL1d7 ttgaaagaaa ctctnnnnaa atatncncct ctacctatta ttgaacncgt ttnccgcaaa act Database: dmel_all_transcript_r320 >CG10391-RA type=mRNA; loc= 2L:complement (18629140..18629444,18629509..18629778, 18629838..18630068,18630121..18630302,18630364..18630480, 18630540..18631067); ID=Cyp310a1-RA; name=Cyp310a1-RA; db_xref='CG10391,FlyBase:FBgn0032693'; len=1633 Length = 1633 Genome Map Score = 75.7 bits (39), Expect = 3e-14 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1 ttgaaagaaactctnnnnaaatatncncctctacctattattgaacncgtttnccgcaaa 60 |||||||||||||| |||||| | |||||||| |||||||||| |||| ||||||| Sbjct: 1052 ttgaaagaaactcttcgcaaatatccacctctacccattattgaacgtgtttgccgcaaa 1111 Query: 61 a 61 | Sbjct: 1112 a 1112 \# anon- EST:CLB3 = CG6736 >anon- EST:CLB3 tgcttngaga gtaactttat ttncctccac tagaaatttt acaatgaaat atttggaaat ncgattacgt ttatagttag tnnttaagtg tagtaggaaa atnaattgca aatngcct Database: dmel_all_transcript_r320 >CG6736-RA type=mRNA; loc= 3L:complement (9760920..9761415,9761477..9761807); Genome Map ID=CG6736-RA; name=CG6736-RA; db_xref='CG6736,FlyBase:FBgn0036048'; len=827 Length = 827 Score = 194 bits (101), Expect = 9e-50 Identities = 110/118 (93%) Strand = Plus / Minus Query: 1 tgcttngagagtaactttatttncctccactagaaattttacaatgaaatatttggaaat 60 ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 812 tgcttggagagtaactttatttgcctccactagaaattttacaatgaaatatttggaaat 753 Query: 61 ncgattacgtttatagttagtnnttaagtgtagtaggaaaatnaattgcaaatngcct 118 ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| Sbjct: 752 acgattacgtttatagttaggggttaagtgtagtaggaaaatgaattgcaaatagcct 695 \#
