A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

Reference
Citation Ni, J.Q., Markstein, M., Binari, R., Pfeiffer, B., Liu, L.P., Villalta, C., Booker, M., Perkins, L., Perrimon, N. (2008). Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster.  Nat. Methods 5(1): 49--51. (Export to RIS)
FlyBase ID FBrf0200406
Publication Type Research paper
PubMed ID 18084299
PubMed Abstract The conditional expression of hairpin constructs in Drosophila melanogaster has emerged in recent years as a method of choice in functional genomic studies. To date, upstream activating site-driven RNA interference constructs have been inserted into the genome randomly using P-element-mediated transformation, which can result in false negatives due to variable expression. To avoid this problem, we have developed a transgenic RNA interference vector based on the phiC31 site-specific integration method.
DOI 10.1038/nmeth1146
Related Publication(s)
Research paper A Drosophila Resource of Transgenic RNAi Lines for Neurogenetics.
Ni et al., 2009, Genetics 182(4): 1089--1100 [FBrf0208670]

Personal communication to FlyBase Initial TRiP stock collection.
Perkins et al., 1.15.2009, Initial TRiP stock collection. [FBrf0206489]

Update to TRiP stock collection.
Perkins et al., 2009.8.10, Update to TRiP stock collection. [FBrf0208863]

Update to TRiP stock collection.
Perkins et al., 2009, Update to TRiP stock collection. [FBrf0208864]

A genome-scale shRNA resource for transgenic RNAi in Drosophila.
Ni et al., 2010.12.1, A genome-scale shRNA resource for transgenic RNAi in Drosophila. [FBrf0212437]

TRiP germline vector pVALIUM21.
Ni et al., 2011.7.19, TRiP germline vector pVALIUM21. [FBrf0214641]

hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Associated Information
Comments
Associated Files
hide Other Information
Secondary IDs
Language of Publication English
Additional Languages of Abstract
Also Published As
hide Parent Publication
Publication Type Journal
Abbreviation Nat. Methods
Title Nature Methods
Publication Year 2004-
ISBN/ISSN 1548-7091 1548-7105
hide Data from Reference
hideAlleles (681)
hideConstructs (682)
hideGenes (541)
hideInsertions (681)
hideLibraries/Collections (1)
hideSequence features (678)