A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

Reference
Citation Piccinelli, P., Rosenblad, M.A., Samuelsson, T. (2005). Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes.  Nucleic Acids Res. 33(14): 4485--4495. (Export to RIS)
FlyBase ID FBrf0205910
Publication Type Research paper
PubMed ID 16087735
PubMed Abstract RNases P and MRP are ribonucleoprotein complexes involved in tRNA and rRNA processing, respectively. The RNA subunits of these two enzymes are structurally related to each other and play an essential role in the enzymatic reaction. Both of the RNAs have a highly conserved helical region, P4, which is important in the catalytic reaction. We have used a bioinformatics approach based on conserved elements to computationally analyze available genomic sequences of eukaryotic organisms and have identified a large number of novel nuclear RNase P and MRP RNA genes. For MRP RNA for instance, this investigation increases the number of known sequences by a factor of three. We present secondary structure models of many of the predicted RNAs. Although all sequences are able to fold into the consensus secondary structure of P and MRP RNAs, a striking variation in size is observed, ranging from a Nosema locustae MRP RNA of 160 nt to much larger RNAs, e.g. a Plasmodium knowlesi P RNA of 696 nt. The P and MRP RNA genes appear in tandem in some protists, further emphasizing the close evolutionary relationship of these RNAs.
DOI 10.1093/nar/gki756
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Language of Publication English
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Publication Type Journal
Abbreviation Nucleic Acids Res.
Title Nucleic Acids Research
Publication Year 1974-
ISBN/ISSN 0305-1048
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