A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Reference Report

Reference
Citation Christensen, S., Cook, K., Cook, K. (2008.12.28). Isolation and characterization of Df(2R)BSC268.  (Export to RIS)
FlyBase ID FBrf0206404
Publication Type Personal communication to FlyBase
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From: kcook@XXXXXXXXXXXXXXX
Subject: Isolation and characterization of Df(2R)BSC268
Date: December 28, 2008 1:15:49 PM GMT-05:00
Isolation and characterization of Df(2R)BSC268
Stacey Christensen, Kim Cook and Kevin Cook
Bloomington Stock Center
Indiana University
Df(2R)BSC268 was isolated as a FLP recombinase-induced recombination event involving PBac{WH}f00088 and P{XP}d09411. The deletion was isolated as a chromosome lacking miniwhite markers in progeny of P{hsFLP}1, y1 w1118; PBac{WH}f00088/P{XP}d09411 males crossed to w1118; P{hs-hid}2, wgSp-1/CyO females. These males were heat shocked as larvae as described in Parks et al., Nature Genetics 36: 288-292, 2004 (FBrf0175003). This cross and crosses in preceding and succeeding generations maintained the original genetic background of the Exelixis insertion stocks (Thibault et al., Nature Genetics 36: 283-287, 2004; FBrf0175002). The recombination event generated the genetic element P+PBac{XP5.WH5}BSC268 from the segment of PBac{WH}f00088 to the left of its FRT site and the segment of P{XP}d09411 to the right of its FRT site. Its presence was verified using the PCR methods and primers described in Parks et al. Exelixis, Inc. determined the insertion site of P{XP}d09411 to be Release 3 genomic coordinate 4091649 on chromosome arm 2R. The Gene Disruption Project determined the insertion site of P{XP}d09411 to be Release 3 genomic coordinate 4091792 on arm 2R. This corresponds to 45A1 on the Release 3 and Release 5 genome maps. The predicted position of PBac{WH}f00088 on the Release 5 map is 44E2. Consequently, the cytological breakpoints of Df(2R)BSC268 are predicted to be 44E2;45A1. It failed to complement cmp44E1 and Rya-r44Fk04913.
__________________________________________________________
Kevin Cook, Ph.D.               Bloomington Drosophila Stock Center
Department of Biology           http://flystocks.bio.indiana.edu
Jordan Hall 142
Indiana University              812-856-1213
1001 E. Third St.               812-855-2577 (fax)
Bloomington, IN  47405-7005     kcook@XXXXXXXXXXXXXXX
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