|Citation||Knowles-Barley, S. (2011.8.24). BrainTrap expression curation. (Export to RIS)|
|Publication Type||Personal communication to FlyBase|
|Text of Personal Communication||
From: Seymour Knowles-Barley <seymour.kb@XXXXXXXXXXXXXXX>
Subject: BrainTrap expression curation
Date: 24 August 2011 17:17:24 GMT+01:00
To: David Osumi-Sutherland <djs93@XXXXXXXXXXXXXXX>
The attached XML contains details of the BrainTrap expression annotation. This is a frozen version of the one live on the BrainTrap site, which can be downloaded here: http://fruitfly.inf.ed.ac.uk/braintrap/feed/annotations_xml
The BrainTrap database contains information on protein expression patterns in the Drosophila melanogaster brain. Further details on the are available in the open access publication: Seymour Knowles-Barley, Mark Longair, and J Douglas Armstrong (2010) BrainTrap: a database of 3D protein expression patterns in the Drosophila brain. Database (Oxford). 2010:baq005, doi: 10.1093/database/baq005.
Drosophila protein trap strains were generated by the St Johnston Lab and the Russell Lab at the University of Cambridge, UK.
Brain images were acquired by Seymour Knowles-Barley, in the Armstrong Lab at the University of Edinburgh. Whole brain mounts were imaged by confocal microscopy, with a background immunohistochemical label (nc82, anti-brp) added to aid the identification of brain structures. Additional immunohistochemical labelling of the EYFP protein using an anti-GFP antibody was also used in most cases. Further protocol details can be found here: http://fruitfly.inf.ed.ac.uk/braintrap/welcome/protocol
Annotations were made by Seymour Knowles-Barley, using the BrainTrap website to manually identify and label major anatomical areas of expression according to the FlyBase anatomy ontology (fly_anatomy.obo). If you use data or images from the BrainTrap website please cite the journal article mentioned above.
|Research paper||BrainTrap: a database of 3D protein expression patterns in the Drosophila brain.
Knowles-Barley et al., 2010, Database (Oxford) 2010: baq005 [FBrf0211243]
What does this section display?
What does this section not display?
This section does not currently display links that were removed or gene model changes.
|All updates||Click here to see a list of all updates to this record from FB2010_08 and on.|
|Associated Files||File date: 2011.8.23 ; File size: 343171 ; File format: xml ; File name: Knowles-Barley.2011.8.24.xml|
|Language of Publication||English|
|Additional Languages of Abstract|
|Also Published As|
|Data from Reference|