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Fisher, B., Weiszmann, R., Frise, E., Hammonds, A., Tomancak, P., Beaton, A., Berman, B., Quan, E., Shu, S., Lewis, S., Rubin, G., Barale, C., Laguertas, E., Quinn, J., Ghosh, A., Hartenstein, V., Ashburner, M., Celniker, S. (2012). BDGP insitu homepage http://insitu.fruitfly.org/cgi-bin/ex/insitu.pl
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FBrf0219073
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Website
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Related Publication(s)
Research paper
Systematic determination of patterns of gene expression during Drosophila embryogenesis.
Tomancak et al., 2002, Genome Biol. 3(12): RESEARCH0088 [FBrf0155831]
Determination of gene expression patterns using high-throughput RNA in situ hybridization to whole-mount Drosophila embryos.
Weiszmann et al., 2009, Nat. Protoc. 4(5): 605--618 [FBrf0207749]
Systematic image-driven analysis of the spatial Drosophila embryonic expression landscape.
Frise et al., 2010, Mol. Syst. Biol. 6: 345 [FBrf0209738]
FlyBase analysis
FlyBase incorporation of BDGP in situ webpage gene expression annotations.
FlyBase Curators, 2012, FlyBase incorporation of BDGP in situ webpage gene expression annotations. [FBrf0219253]
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The BDGP uses high throughput RNA in situ hybridization in 96-well plates (FBrf0207749) to determine the patterns of gene expression during embryogenesis. Probes are generated using the Drosophila melanogaster DGC cDNA/EST collection (FBrf0155824). Images are collected and gene expression patterns are annotated using a controlled vocabulary developed with the help of Volker Hartenstein. Images and anatomy annotation data can be browsed, searched or downloaded in bulk.
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    English
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