Open Close
Reference
Citation
Ohyama, T., Schulze, K. (2013.7.28). Df(3L)TO1, Df(3L)TO2, Df(3L)TO3 and Df(3L)TO4. 
FlyBase ID
FBrf0222218
Publication Type
Personal communication to FlyBase
Abstract
PubMed ID
PubMed Central ID
Text of Personal Communication
"We generated 4 small deletions using FLPase and FRT-bearing P-elements or PiggyBac
insertions as described before (Parks et al., 2004; Thibault et al., 2004). The following
insertions were used: pXPd10386 and PBacWHf01638 (to generate a deletion from
79E3 to 79E6); pXPCG11426 d05846 and PBacRBe01384 (to generate a deletion
from 79E4 to 80A1’); pXPCG11367 d05379 and PBacRB e01384 (to generate a
deletion from 80A1 to 80A1’); pXPCG11367 d05379 and PBacRB e02858 (to
generate a deletion from 80A1 to 80B1)."
(Taken from Supplementary Material to FBrf0214681.)
The four Dfs correspond to the bottom four green Dfs in Figure 3 of the paper (FBrf0214681).  (The top red Df is Df(3L)ED230 and the top green line is Df(3L)Exel6138--even though it doesn't say it in the paper.)  We're thinking Df(3L)TO1 through 4 as symbols.  Here's the info for them:
Df(3L)TO1
Progenitor insertion break 1: P{XP}d10386 (FBti0057089) 
Progenitor insertion break 2: PBac{WH}f01638 (FBti0050107)
Sequence coordinate break 1:  3L:22401049 
Sequence coordinate break 2:  3L:22503151 
Computed breakpoint break1: 79E3
Computed breakpoint break2: 79E6
Genes NOT deleted: olf413 (FBgn0037153), Rich (FBgn0028500), Ddx1 (FBgn0015075), CSP (FBgn0004179), CG11523 (FBgn0037156)
Df(3L)TO2
Progenitor insertion break 1: P{XP}CG11426d05846 (FBti0042832) 
Progenitor insertion break 2: PBac{RB}SPoCke01384 (FBti0047055) 
Sequence coordinate break 1:  3L:22465126 
Sequence coordinate break 2:  3L:22743497  
Computed breakpoint break1: 79E4
Computed breakpoint break2: 80A1 
Genes NOT deleted: olf413 (FBgn0037153), Rich (FBgn0028500), Ddx1 (FBgn0015075), CSP (FBgn0004179), CG11523 (FBgn0037156)3
Df(3L)TO3
Progenitor insertion break 1: P{XP}CG11367d05379 (FBti0055835) 
Progenitor insertion break 2: PBac{RB}SPoCke01384 (FBti0047055) 
Sequence coordinate break 1:  3L:22721222 
Sequence coordinate break 2:  3L:22743497  
Computed breakpoint break1: 80A1
Computed breakpoint break2: 80A1 
Genes NOT deleted: olf413 (FBgn0037153), Rich (FBgn0028500), Ddx1 (FBgn0015075), CSP (FBgn0004179), CG11523 (FBgn0037156)
Df(3L)TO4
Progenitor insertion break 1: P{XP}CG11367d05379 (FBti0055835) 
Progenitor insertion break 2: PBac{RB}e02858 (FBti0047946) 
Sequence coordinate break 1:  3L:22721222 
Sequence coordinate break 2:  3L:22841372  
Computed breakpoint break1: 80A1
Computed breakpoint break2: 80B1 
Genes NOT deleted: olf413 (FBgn0037153), Rich (FBgn0028500), Ddx1 (FBgn0015075), CSP (FBgn0004179), CG11523 (FBgn0037156)
DOI
Related Publication(s)
Research paper

Rich Regulates Target Specificity of Photoreceptor Cells and N-Cadherin Trafficking in the Drosophila Visual System via Rab6.
Tong et al., 2011, Neuron 71(3): 447--459 [FBrf0214681]

Associated Information
Comments
Associated Files
Other Information
Secondary IDs
    Language of Publication
    English
    Additional Languages of Abstract
    Parent Publication
    Publication Type
    Abbreviation
    Title
    ISBN/ISSN
    Data From Reference