A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol dsRNA-GD3264 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000073779
Collection VDRC-1   Associated gene(s) ogre
Genomic Location
Chromosome (arm) X Sequence location X:6,868,780..6,869,116 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0071038 FBtr0309875 FBtr0071037 FBtr0071036 FBtr0334881 FBtr0309874 FBtr0309873 FBsf0000021018 FBsf0000034668 FBsf0000018228 FBsf0000077854 FBsf0000073779 FBsf0000095483 FBsf0000400789 FBsf0000397352
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Sequence Data
Length 337
Comments
One copy of repeat shown
(Dietzl et al., 2007)
Sequence 
CGCCACAAGCTGTACGCCATTCGGTACTGGGCCTGCGAATTTCTCTGCTG
CATCAACATTATCGTGCAGATGTATCTGATGAATCGCTTTTTCGATGGCG
AGTTCCTCTCGTACGGTACGAATATCATGAAGCTTTCGGATGTGCCGCAG
GAGCAAAGGGTGGATCCCATGGTCTATGTGTTCCCCCGGGTGACCAAGTG
CACCTTCCACAAGTATGGTCCCTCTGGTTCGCTGCAGAAGCACGACTCAC
TCTGCATCCTGCCGCTGAACATTGTGAACGAGAAGACGTACGTGTTCATC
TGGTTCTGGTTCTGGATCCTGCTCGTCCTGCTCATCG
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
genomic DNA
(Dietzl et al., 2007)
Primer 1
CGCCACAAGCTGTACGCCATT
(Dietzl et al., 2007)
Primer 2
CGATGAGCAGGACGAGCAGGA
(Dietzl et al., 2007)
Comments
hide Collection Information
hide Collection: VDRC-1
Symbol VDRC-1
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Comprehensive collection of stocks carrying UAS-RNAi transgenes, each designed to target a single protein-coding gene.
(Dietzl et al., 2007)
Additional data
A collection of over 13,200 RNAi transgenes (over 22,200 lines), each designed to target a single protein-coding gene; each construct contains short gene fragments cloned as inverted repeats that are expressed using the binary GAL4/UAS system. It is estimated that 88% of predicted protein-coding genes are targeted.
(Dietzl et al., 2007)
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 1 )
VDRC
v7136
w1118; P{GD3264}v7136
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hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
3264
(Dietzl et al., 2007)
dsRNA-GD3264
 
Secondary FlyBase IDs
  • FBri0070386
hide References ( 1 )
Supplementary material
Dietzl et al., 2007, Nature 448(7150):
Supplementary Table 1. [FBrf0202579]