A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol dsRNA-GD6713 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000076181
Collection VDRC-1   Associated gene(s) CHKov2
Genomic Location
Chromosome (arm) 3R Sequence location 3R:21,156,187..21,156,492 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0113353 FBtr0113352 FBtr0084849 FBtr0300687 FBtr0084848 FBsf0000030778 FBsf0000026442 FBsf0000013756 FBsf0000030779 FBsf0000030355 FBsf0000088132 FBsf0000076181 FBsf0000438437 FBsf0000401871 FBsf0000398668 FBsf0000393456
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Sequence Data
Length 306
Comments
One copy of repeat shown
(Dietzl et al., 2007)
Sequence 
TCCATATCACCAAAATTCAAGCCTGTTCATCTGAAGTTTCCAGGAGAGCC
GGTAAAAAGCGACTACATTCTTTTGGAGGATCTGCGGAAGAAGGGATATA
GGAATGCCGACAGAACCCAGGGATTGGAGCAGTTTGAAGTGGAGGCGGTC
CTCAAGAAGTTGGCACAGTGGCACGCAGCCTCTGCAAAAAGAGTAGTCGA
GCTGGGTGAATACGAGAAGGACATCCGGGAGAGTTACTTTACTACTGAGC
ACCAGAAATTACTCGATGAATTCAACATTAATTTTTGTATGCCCTTCCTG
GAGTGC
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
genomic DNA
(Dietzl et al., 2007)
Primer 1
TCCATATCACCAAAATTCAAGCCTGTTC
(Dietzl et al., 2007)
Primer 2
GCACTCCAGGAAGGGCATACAAAA
(Dietzl et al., 2007)
Comments
hide Collection Information
hide Collection: VDRC-1
Symbol VDRC-1
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Comprehensive collection of stocks carrying UAS-RNAi transgenes, each designed to target a single protein-coding gene.
(Dietzl et al., 2007)
Additional data
A collection of over 13,200 RNAi transgenes (over 22,200 lines), each designed to target a single protein-coding gene; each construct contains short gene fragments cloned as inverted repeats that are expressed using the binary GAL4/UAS system. It is estimated that 88% of predicted protein-coding genes are targeted.
(Dietzl et al., 2007)
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 2 )
VDRC
v45100
w1118; P{GD6713}v45100
v45099
w1118; P{GD6713}v45099/TM3
hide External Crossreferences & Linkouts
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
6713
(Dietzl et al., 2007)
dsRNA-GD6713
 
Secondary FlyBase IDs
  • FBri0073473
hide References ( 1 )
Supplementary material
Dietzl et al., 2007, Nature 448(7150):
Supplementary Table 1. [FBrf0202579]