A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol dsRNA-GD11567 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000080060
Collection VDRC-1   Associated gene(s) CG5177
Genomic Location
Chromosome (arm) 2L Sequence location 2L:7,405,449..7,405,758 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0302587 FBtr0079439 FBtr0079440 FBtr0334838 FBtr0079441 FBtr0332522 FBsf0000002724 FBsf0000025660 FBsf0000002725 FBsf0000088838 FBsf0000080058 FBsf0000080060 FBsf0000415350 FBsf0000403735 FBsf0000415327 FBsf0000415413 FBsf0000386062 FBsf0000386063
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Sequence Data
Length 310
Comments
One copy of repeat shown
(Dietzl et al., 2007)
Sequence 
TTCATTAACCCCGAAACCGATCAGGTGGCCCTGTTGCTGGATTACGATGG
CACCCTGGCCCCGCTCACCGAGGAGCTGTCCGTCATGCCCAAGGATACCG
AGATCAACATCAAGAAACTGGCCGCCAACGAGAAAATCTTCATGGTCGTC
TTCTCCGGTCGCGAACTGAGCGAGATCAAGAACCACCTGAAGTTCCCCAA
TGTGACCTATGCCGGCAACCATGGTCTGGAGGTTGAGTATCCTTCCGGCA
AGAAATTCAAGATCGAGATGCCCGAGGAATTGCTCGAGAAGCACAACAAG
CTGGTGTCTG
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
genomic DNA
(Dietzl et al., 2007)
Primer 1
TTCATTAACCCCGAAACCGATCA
(Dietzl et al., 2007)
Primer 2
CAGACACCAGCTTGTTGTGCTTCTC
(Dietzl et al., 2007)
Comments
hide Collection Information
hide Collection: VDRC-1
Symbol VDRC-1
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Comprehensive collection of stocks carrying UAS-RNAi transgenes, each designed to target a single protein-coding gene.
(Dietzl et al., 2007)
Additional data
A collection of over 13,200 RNAi transgenes (over 22,200 lines), each designed to target a single protein-coding gene; each construct contains short gene fragments cloned as inverted repeats that are expressed using the binary GAL4/UAS system. It is estimated that 88% of predicted protein-coding genes are targeted.
(Dietzl et al., 2007)
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 1 )
VDRC
v27367
w1118; P{GD11567}v27367/CyO
hide External Crossreferences & Linkouts
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
11567
(Dietzl et al., 2007)
dsRNA-GD11567
 
Secondary FlyBase IDs
  • FBri0077912
hide References ( 1 )
Supplementary material
Dietzl et al., 2007, Nature 448(7150):
Supplementary Table 1. [FBrf0202579]