A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol dsRNA-GD12495 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000084731
Collection VDRC-1   Associated gene(s) Mocs1
Genomic Location
Chromosome (arm) 3L Sequence location 3L:11,063,968..11,064,857 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0076203 FBtr0332704 FBtr0076239 FBtr0076205 FBtr0076204 FBtr0332708 FBtr0076238 FBsf0000010246 FBsf0000010846 FBsf0000010245 FBsf0000094687 FBsf0000438151 FBsf0000411034 FBsf0000405936 FBsf0000401577 FBsf0000391482 FBsf0000392063 FBsf0000391481
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Sequence Data
Length 396
Comments
One copy of repeat shown
(Dietzl et al., 2007)
Sequence 
GGGCGAGGTGGCTTCACTTTCGAGAGGAGCAATCCGGCTGAAGGCCACAA
CCGGTTACCTCAATCTGGCCACGGCAAGTGTTCAGCCATTGGAGCCGGAG
AAACAGGTGCTGAGAAAGAATTCGCCACTCACGGACTCCTTTGGCCGGCA
TCACACCTATTTGAGAATTTCTCTAACCGAACGCTGCAATCTGCGATGCG
ACTACTGCATGCCCGCTGAAGGCGTTCCGCTACAGCCGAAAAACAAACTC
CTGACCACCGAGGAAATCCTTCGTCTAGCTCGAATTTTCGTGGAGCAGGG
AGTGCGAAAGATCCGCTTGACCGGCGGAGAGCCAACTGTGCGCAGGGATA
TCGTAGAGATAGTGGCACAAATGAAAGCACTACCCGAACTGGAGCA
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
cDNA
(Dietzl et al., 2007)
Primer 1
GGGCGAGGTGGCTTCACTTTC
(Dietzl et al., 2007)
Primer 2
TGCTCCAGTTCGGGTAGTGCTTTC
(Dietzl et al., 2007)
Comments
hide Collection Information
hide Collection: VDRC-1
Symbol VDRC-1
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Comprehensive collection of stocks carrying UAS-RNAi transgenes, each designed to target a single protein-coding gene.
(Dietzl et al., 2007)
Additional data
A collection of over 13,200 RNAi transgenes (over 22,200 lines), each designed to target a single protein-coding gene; each construct contains short gene fragments cloned as inverted repeats that are expressed using the binary GAL4/UAS system. It is estimated that 88% of predicted protein-coding genes are targeted.
(Dietzl et al., 2007)
Cell lines
Observed in
Not observed in
hide Comments
hide Stocks Listed in FlyBase ( 0 )
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hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
12495
(Dietzl et al., 2007)
dsRNA-GD12495
 
Secondary FlyBase IDs
  • FBri0078746
hide References ( 1 )
Supplementary material
Dietzl et al., 2007, Nature 448(7150):
Supplementary Table 1. [FBrf0202579]