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Sequence Feature: exon_junction
| General Information | |||
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| Symbol | Dmel:r5:2R:13333424:13333482:- | Species | D. melanogaster |
| Feature type | exon_junction | FlyBase ID | FBsf0000150054 |
| Collection | BCM_1_RNAseq_junctions | Associated gene(s) | mthl4 |
| Genomic Location | |||
| Chromosome (arm) | 2R | Sequence location | 2R:13,333,424..13,333,482 [-] |
Map ( GBrowse )
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Recent Updates
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| Description |
What does this section display?
This section contains items that were added to this record for each release.
It currently only tracks new links between this FlyBase report and other
FlyBase data classes (e.g. genes, references, stocks) or controlled
vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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| FB2013_03 | |||
| FB2013_02 | |||
| All updates | Click here to see a list of all updates to this record from FB2010_08 and on. | ||
Sequence Data
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| Length | |||
| Comments |
GT..AG
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| Sequence | |||
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Associated Information
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| Gene(s) (targeted or local) |
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| Allele(s) |
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| Transcripts(s) |
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| Polypeptide(s) |
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| Construct |
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Experimental Data
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RNA-Seq Read Counts
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Library: BCM_1_RNAseq_junctions
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Expression stage(s)
Read Count
0
0
0
embryonic stage 16
Comment:14-16 hr
0
0
late third instar larval stage
Comment:wandering
3
late third instar larval stage
Comment:wandering
0
pupal stage
Comment:aged 1 to 5 days after collection as third instar larvae
0
pupal stage P6 -- pharate adult stage P10
Comment:aged 72 hrs after collection as third instar larvae
0
adult stage
Comment:aged 17 days post-eclosion
0
0
0
Total
3
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Progenitors
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| PCR template | |||
| Primer 1 | |||
| Primer 2 | |||
| Comments | |||
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Collection Information
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Collection: BCM_1_RNAseq_junctions
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| Symbol | BCM_1_RNAseq_junctions | ||
| Source and Progenitors | |||
| Species of derivation | D. melanogaster | ||
| Strain of derivation | |||
| Vector or progenitor construct | |||
| Description | |||
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Umbrella record for 12 collections that differ by developmental stage, from embryos to aged adults. RNA junctions identified
and characterized (presented in GBrowse and in RNA junction reports).
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| Additional data | |||
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See report for BCM_1_RNAseq.
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| Cell lines | |||
| Observed in | |||
| Not observed in | |||
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Comments
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Matches FlyBase Annotated Junction.
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Stocks Listed in FlyBase
( 0 )
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External Crossreferences & Linkouts
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Synonyms & Secondary IDs
( 2 )
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| Reported As | |||
| Symbol Synonym |
2R:13333424-13333481
Dmel:r5:2R:13333424:13333482:-
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| Secondary FlyBase IDs | |||
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References
( 2 )
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| Personal communication to FlyBase |
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| FlyBase analysis |
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