A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol HFA19569 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000397703
Collection HFA   Associated gene(s) Rcd-1
Genomic Location
Chromosome (arm) X Sequence location X:19,533,932..19,534,063 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0334280 FBtr0334279 FBtr0074762 FBtr0334278 FBtr0334281 FBtr0334277 FBtr0074744 FBtr0074743 FBtr0074761 FBsf0000018971 FBsf0000030481 FBsf0000020860 FBsf0000018851 FBsf0000084261 FBsf0000092126 FBsf0000195193 FBsf0000085251 FBsf0000437237 FBsf0000407487 FBsf0000406853 FBsf0000413455 FBsf0000397703 FBsf0000397604
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Sequence Data
Length 132
Comments
Sequence
GACGAACAGGAGGTGATCACCTTTCTGCTGACCACCGAGATCGTGCCCCT
TTGTCTGAGCATCATGGACAGCGGATCGGAGCTGAGCAAGACTGTGGCCA
CTTTCATCATCCAGAAGATCCTGCTCGATGAG
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
Primer 1
GACGAACAGGAGGTGATCA
Primer 2
CTCATCGAGCAGGATCTTC
Comments
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hide Collection: HFAHFA
Symbol HFAHFA
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Collection of double-strand RNA fragments, used for genome-wide RNAi-knockdown assays in cell culture. RNAi targeting of transcripts annotated by the Berkeley Drosophila Genome Project and additionally predicted gene models.
 
Additional data
Cell lines
Observed in
Not observed in
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hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Secondary FlyBase IDs
    hide References ( 1 )
    Personal communication to FlyBase
    Horn et al., 2011.11.16, GenomeRNAi reagent in FlyBase
    GenomeRNAi reagent in FlyBase [FBrf0216883]