A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol BKN23569 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000402100
Collection HD2   Associated gene(s) Grip71
Genomic Location
Chromosome (arm) 2L Sequence location 2L:18,709,766..18,710,161 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0343115 FBtr0081126 FBtr0081099 FBtr0343114 FBtr0081125 FBsf0000035615 FBsf0000001948 FBsf0000001953 FBsf0000086983 FBsf0000088240 FBsf0000076378 FBsf0000090622 FBsf0000399842 FBsf0000402100 FBsf0000405380 FBsf0000385337 FBsf0000385342
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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Length 396
Comments
Sequence
AAATCGTGCTCAGGCCTCTACGGATCGCTTGACCTACTCGCATCCACTAT
CGACGGTGGCGCTGAGTGAATGTGGCACTTATCTTTGTGCTGGAAACCTT
AAGGGCGAATTAATAGCCTATGATATGAGGAGTACAAAGGCTCCGTTGGC
CGTGAGGAGTGTACATGATGCGGCTGTAACACGTGTAGCCTTTGTGCCCG
TGCCAAGTGGGGATAACCAGCAGAACGGTAGCCTCAACAGCTCCGAAAAT
GCAACTGGTTTGGCGACCGAAGCTCCTCGTGTAGAGCGTGCGCCCAGCGA
TGAGTTGCGTAAATCGATTGCCGCTAATTTGTTGAGCACCCAAAACCAGC
TGACCAGTCTTGGTTACGGGGTGTCAACACCTACCATAGTTCGCCG
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
Primer 1
AAATCGTGCTCAGGCCTCTA
Primer 2
CGGCGAACTATGGTAGGTGT
Comments
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hide Collection: HD2HD2
Symbol HD2HD2
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Collection of double-strand RNA fragments, used for genome-wide RNAi-knockdown assays in cell culture. RNAi targeting of transcripts annotated by the Berkeley Drosophila Genome Project and additionally predicted gene models.
 
Additional data
Cell lines
Observed in
Not observed in
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hide Stocks Listed in FlyBase ( 0 )
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hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Secondary FlyBase IDs
    hide References ( 1 )
    Personal communication to FlyBase
    Horn et al., 2011.11.16, GenomeRNAi reagent in FlyBase
    GenomeRNAi reagent in FlyBase [FBrf0216883]