A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Sequence Feature: RNAi_reagent

General Information
Symbol BKN32365 Species D. melanogaster
Feature type RNAi_reagent FlyBase ID FBsf0000410328
Collection HD2   Associated gene(s) lectin-37Da
Genomic Location
Chromosome (arm) 2L Sequence location 2L:19,418,609..19,418,916 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBtr0081201 FBtr0302360 FBtr0091498 FBtr0302361 FBtr0091499 FBtr0302362 FBtr0081211 FBtr0100449 FBtr0081210 FBsf0000003263 FBsf0000003179 FBsf0000021184 FBsf0000003180 FBsf0000090083 FBsf0000075063 FBsf0000075064 FBsf0000094126 FBsf0000090182 FBsf0000404672 FBsf0000410328 FBsf0000413728 FBsf0000404787 FBsf0000386585 FBsf0000386502 FBsf0000386503
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Sequence Data
Length 308
Comments
Sequence 
TCGAAACAGCCGAAGAGTTTGACGCCATTGCCGCGTTCTTGAATGCCCGA
GGAGATCGCTCCGAGCACTGGACCTCCGGCAATGATTTGGGCAAAACCGG
CACCCACTACTGGTTCTCTAATGCACAACTCGTGACCATTAAGCGTTGGG
CGCCCAAACAACCAGACAATGCTGGCGGTAGGGAGCATTGCATACACTTG
GGCTACATCTACGGCTATTCAACGGAGTTCCAACTGAATGATCGACCCTG
CCACAACCACGCGAGTAGCTTGTTTAAGTACATTTGTGAGGCTCCAAAGC
AGGAAACT
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Gene(s)
(targeted or local)
Allele(s)
Transcripts(s)
Polypeptide(s)
Construct
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PCR template
genomic
(Horn et al., 2011.11.16)
Primer 1
TCGAAACAGCCGAAGAGTTT
(Horn et al., 2011.11.16)
Primer 2
AGTTTCCTGCTTTGGAGCCT
(Horn et al., 2011.11.16)
Comments
hide Collection Information
hide Collection: HD2HD2
Symbol HD2HD2
Source and Progenitors
Species of derivation D. melanogaster  
Strain of derivation
Vector or progenitor construct
Description
Collection of double-strand RNA fragments, used for genome-wide RNAi-knockdown assays in cell culture. RNAi targeting of transcripts annotated by the Berkeley Drosophila Genome Project and additionally predicted gene models.
 
Additional data
Cell lines
Observed in
Not observed in
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hide Stocks Listed in FlyBase ( 0 )
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hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
BKN32365
(Horn et al., 2011.11.16)
Secondary FlyBase IDs
    hide References ( 1 )
    Personal communication to FlyBase
    Horn et al., 2011.11.16, GenomeRNAi reagent in FlyBase
    GenomeRNAi reagent in FlyBase [FBrf0216883]